Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14790 Utricularia gibba HOM05D002011 ORTHO05D001948 9.0e-96 354.0 236 100.0
SGA_v2.0_scaffold37G14736 Striga asiatica HOM05D002011 ORTHO05D001948 1.5e-26 124.0 236 37.7
Migut.I00725 Erythranthe guttata HOM05D002011 ORTHO05D001948 6.0e-23 112.1 258 33.7
MSTRG.11167 Avicennia marina HOM05D002011 ORTHO05D001948 1.0e-22 111.3 261 35.2
unitig_62.g23779 Utricularia gibba HOM05D002011 ORTHO05D001948 1.3e-22 110.9 243 39.1
MSTRG.22780 Avicennia marina HOM05D002011 ORTHO05D001948 2.3e-22 110.2 254 33.5
unitig_52.g17073 Utricularia gibba HOM05D002011 ORTHO05D001948 1.5e-21 107.5 233 40.3
SalBow7G0591 Salvia bowleyana HOM05D002011 ORTHO05D001948 1.9e-21 107.1 254 35.8
MSTRG.9415 Avicennia marina HOM05D002011 ORTHO05D001948 4.7e-20 102.4 265 32.1
unitig_0.g358 Utricularia gibba HOM05D002011 ORTHO05D001948 4.7e-20 102.4 243 37.0
Migut.D01093 Erythranthe guttata HOM05D002011 ORTHO05D001948 4.9e-17 92.4 246 33.7
FvH4_6g29000 Fragaria vesca HOM05D002011 ORTHO05D001948 4.1e-16 89.4 263 30.4
FAN14G4768 Fragaria x ananassa HOM05D002011 ORTHO05D001948 4.1e-16 89.4 263 30.4
unitig_60.g25613 Utricularia gibba HOM05D002011 ORTHO05D001948 9.2e-16 88.2 236 31.4
Nitab4.5_0005934g0050 Nicotiana tabacum HOM05D002011 ORTHO05D001948 4.6e-15 85.9 276 30.1
FAN02G4077 Fragaria x ananassa HOM05D002011 ORTHO05D001948 7.8e-15 85.1 263 30.4
FAN09G3914 Fragaria x ananassa HOM05D002011 ORTHO05D001948 2.3e-14 83.6 264 31.1
Cpa.g.sc10.124 Carica papaya HOM05D002011 ORTHO05D001948 3.0e-14 83.2 268 28.4
VMungo1080G1625 Vigna mungo HOM05D002011 ORTHO05D001948 3.9e-14 82.8 272 30.5
Dinv23313 Davidia involucrata HOM05D002011 ORTHO05D001948 6.6e-14 82.0 270 31.9
QL05p034085 Quercus lobata HOM05D002011 ORTHO05D001948 1.1e-13 81.3 261 29.1
Actinidia08950 Actinidia chinensis HOM05D002011 ORTHO05D001948 1.5e-13 80.9 266 30.8
Glyma.13G369000 Glycine max HOM05D002011 ORTHO05D001948 1.5e-13 80.9 248 41.5
Glyma.15G004800 Glycine max HOM05D002011 ORTHO05D001948 2.5e-13 80.1 247 32.0
FAN05G1371 Fragaria x ananassa HOM05D002011 ORTHO05D001948 3.3e-13 79.7 264 30.3
FAN05G4451 Fragaria x ananassa HOM05D002011 ORTHO05D001948 3.3e-13 79.7 264 30.3
THA.LOC104813579 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 4.3e-13 79.3 235 31.1
HanXRQChr09g0274671 Helianthus annuus HOM05D002011 ORTHO05D001948 5.6e-13 79.0 219 31.5
Sp5g35160 Schrenkiella parvula HOM05D002011 ORTHO05D001948 5.6e-13 79.0 229 30.6
Actinidia18229 Actinidia chinensis HOM05D002011 ORTHO05D001948 7.3e-13 78.6 89 50.6
Oeu027834.1 Olea europaea HOM05D002011 ORTHO05D001948 1.2e-12 77.8 255 28.6
Ciclev10026302m.g Citrus clementina HOM05D002011 ORTHO05D001948 1.6e-12 77.4 265 28.3
Phvul.005G181100 Phaseolus vulgaris HOM05D002011 ORTHO05D001948 2.1e-12 77.0 261 29.9
CARHR016310 Cardamine hirsuta HOM05D002011 ORTHO05D001948 2.8e-12 76.6 238 29.8
MD17G1219700 Malus domestica HOM05D002011 ORTHO05D001948 2.8e-12 76.6 284 30.3
Peaxi162Scf00332g00224 Petunia axillaris HOM05D002011 ORTHO05D001948 3.6e-12 76.3 276 27.2
Oeu010089.1 Olea europaea HOM05D002011 ORTHO05D001948 4.7e-12 75.9 257 30.0
CARHR073910 Cardamine hirsuta HOM05D002011 ORTHO05D001948 6.2e-12 75.5 234 32.9
Carub.0002s2694 Capsella rubella HOM05D002011 ORTHO05D001948 8.1e-12 75.1 231 35.5
Lalb_Chr22g0350711 Lupinus albus HOM05D002011 ORTHO05D001948 8.1e-12 75.1 220 30.9
AL2G40840 Arabidopsis lyrata HOM05D002011 ORTHO05D001948 1.4e-11 74.3 246 28.0
Cc04_g04820 Coffea canephora HOM05D002011 ORTHO05D001948 1.4e-11 74.3 285 28.1
SalBow6G6276 Salvia bowleyana HOM05D002011 ORTHO05D001948 4.0e-11 72.8 102 47.1
SalBow6G6641 Salvia bowleyana HOM05D002011 ORTHO05D001948 4.0e-11 72.8 102 47.1
Thhalv10008783m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 5.2e-11 72.4 250 27.2
Actinidia25442 Actinidia chinensis HOM05D002011 ORTHO05D001948 6.8e-11 72.0 123 44.7
Lj5C77G14 Lonicera japonica HOM05D002011 ORTHO05D001948 6.8e-11 72.0 243 32.1
Thhalv10019140m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 8.9e-11 71.6 231 35.1
Gohir.D06G190800 Gossypium hirsutum HOM05D002011 ORTHO05D001948 8.9e-11 71.6 96 43.8
Prupe.3G095200 Prunus persica HOM05D002011 ORTHO05D001948 8.9e-11 71.6 278 27.7
Aa31LG7G400 Aethionema arabicum HOM05D002011 ORTHO05D001948 1.2e-10 71.2 80 46.2
CAN.G407.39 Capsicum annuum HOM05D002011 ORTHO05D001948 1.5e-10 70.9 258 33.3
Rhsim08G0208500 Rhododendron simsii HOM05D002011 ORTHO05D001948 2.6e-10 70.1 257 39.3
Sabra17G0045900 Salix brachista HOM05D002011 ORTHO05D001948 2.6e-10 70.1 260 27.3
A09p61180 Brassica napus HOM05D002011 ORTHO05D001948 3.4e-10 69.7 82 45.1
BraA06t24357Z Brassica rapa HOM05D002011 ORTHO05D001948 3.4e-10 69.7 86 47.7
BraA09t41492Z Brassica rapa HOM05D002011 ORTHO05D001948 3.4e-10 69.7 82 45.1
Oeu060123.1 Olea europaea HOM05D002011 ORTHO05D001948 3.4e-10 69.7 108 40.7
CANSAT56G3958 Cannabis sativa HOM05D002011 ORTHO05D001948 4.4e-10 69.3 123 39.8
A06p11870 Brassica napus HOM05D002011 ORTHO05D001948 5.8e-10 68.9 86 47.7
Cfa001910 Carpinus fangiana HOM05D002011 ORTHO05D001948 5.8e-10 68.9 269 32.7
AL1G27950 Arabidopsis lyrata HOM05D002011 ORTHO05D001948 7.6e-10 68.6 238 29.8
AT1G80610 Arabidopsis thaliana HOM05D002011 ORTHO05D001948 7.6e-10 68.6 240 34.2
Gohir.A06G183800 Gossypium hirsutum HOM05D002011 ORTHO05D001948 7.6e-10 68.6 96 42.7
Gorai.010G223900 Gossypium raimondii HOM05D002011 ORTHO05D001948 7.6e-10 68.6 96 42.7
Rhsim12G0188600 Rhododendron simsii HOM05D002011 ORTHO05D001948 9.9e-10 68.2 88 47.7
BcaB02g07260 Brassica carinata HOM05D002011 ORTHO05D001948 1.3e-09 67.8 228 28.5
Carub.0001s1559 Capsella rubella HOM05D002011 ORTHO05D001948 1.3e-09 67.8 84 45.2
Lsat_1_v5_gn_1_31661 Lactuca sativa HOM05D002011 ORTHO05D001948 1.3e-09 67.8 114 42.1
Potri.017G053900 Populus trichocarpa HOM05D002011 ORTHO05D001948 1.3e-09 67.8 252 28.2
Sp1g14100 Schrenkiella parvula HOM05D002011 ORTHO05D001948 1.3e-09 67.8 81 46.9
TAR626G1639 Trochodendron aralioides HOM05D002011 ORTHO05D001948 1.3e-09 67.8 267 27.3
Aa31LG4G890 Aethionema arabicum HOM05D002011 ORTHO05D001948 1.7e-09 67.4 83 42.2
arahy.Tifrunner.gnm1.ann1.H5ECBD Arachis hypogaea HOM05D002011 ORTHO05D001948 1.7e-09 67.4 85 47.1
arahy.Tifrunner.gnm1.ann1.W5XW0C Arachis hypogaea HOM05D002011 ORTHO05D001948 1.7e-09 67.4 85 47.1
TAR625G1096 Trochodendron aralioides HOM05D002011 ORTHO05D001948 2.2e-09 67.0 103 41.7
CSS0010574 Camellia sinensis var. sinensis HOM05D002011 ORTHO05D001948 2.9e-09 66.6 228 28.1
CSS0039956 Camellia sinensis var. sinensis HOM05D002011 ORTHO05D001948 2.9e-09 66.6 88 47.7
Haze_16633 Corylus avellana HOM05D002011 ORTHO05D001948 2.9e-09 66.6 114 39.5
Haze_16635 Corylus avellana HOM05D002011 ORTHO05D001948 2.9e-09 66.6 114 39.5
A07p45090 Brassica napus HOM05D002011 ORTHO05D001948 3.7e-09 66.2 233 28.8
Nn8g39727 Nelumbo nucifera HOM05D002011 ORTHO05D001948 3.7e-09 66.2 284 28.9
AT1G15800 Arabidopsis thaliana HOM05D002011 ORTHO05D001948 4.9e-09 65.9 235 28.9
RcHm_v2.0_Chr2g0133521 Rosa chinensis HOM05D002011 ORTHO05D001948 4.9e-09 65.9 266 27.8
MD09G1223300 Malus domestica HOM05D002011 ORTHO05D001948 6.4e-09 65.5 195 32.3
Nitab4.5_0008673g0020 Nicotiana tabacum HOM05D002011 ORTHO05D001948 6.4e-09 65.5 260 33.8
PGR031G3130 Punica granatum HOM05D002011 ORTHO05D001948 6.4e-09 65.5 124 37.1
Sopen03g036120 Solanum pennellii HOM05D002011 ORTHO05D001948 6.4e-09 65.5 290 27.6
Atru.chr10.2381 Acer truncatum HOM05D002011 ORTHO05D001948 8.4e-09 65.1 255 32.2
BolC8t52023H Brassica oleracea HOM05D002011 ORTHO05D001948 8.4e-09 65.1 112 39.3
BraA02t07327Z Brassica rapa HOM05D002011 ORTHO05D001948 8.4e-09 65.1 222 27.0
BcaC03g15943 Brassica carinata HOM05D002011 ORTHO05D001948 1.1e-08 64.7 222 26.6
C02p37050 Brassica napus HOM05D002011 ORTHO05D001948 1.1e-08 64.7 222 26.6
C08p44770 Brassica napus HOM05D002011 ORTHO05D001948 1.1e-08 64.7 226 27.4
BraA07t32012Z Brassica rapa HOM05D002011 ORTHO05D001948 1.1e-08 64.7 238 28.6
THA.LOC104803849 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 1.4e-08 64.3 257 28.8
TWI18G0546 Tripterygium wilfordii HOM05D002011 ORTHO05D001948 1.4e-08 64.3 109 41.3
CSS0035080 Camellia sinensis var. sinensis HOM05D002011 ORTHO05D001948 1.9e-08 63.9 88 44.3
ClCG09G003220 Citrullus lanatus HOM05D002011 ORTHO05D001948 1.9e-08 63.9 118 40.7
Psat7g258520 Pisum sativum HOM05D002011 ORTHO05D001948 1.9e-08 63.9 183 31.7
Solyc03g117210.4 Solanum lycopersicum HOM05D002011 ORTHO05D001948 1.9e-08 63.9 289 26.0
C05p14050 Brassica napus HOM05D002011 ORTHO05D001948 2.4e-08 63.5 81 45.7
BolC5t30136H Brassica oleracea HOM05D002011 ORTHO05D001948 2.4e-08 63.5 81 45.7
COL.COLO4_11828 Corchorus olitorius HOM05D002011 ORTHO05D001948 2.4e-08 63.5 244 28.3
vmacro11223 Vaccinium macrocarpon HOM05D002011 ORTHO05D001948 2.4e-08 63.5 94 44.7
BcaC08g45329 Brassica carinata HOM05D002011 ORTHO05D001948 3.2e-08 63.2 228 28.1
BolC2t09720H Brassica oleracea HOM05D002011 ORTHO05D001948 3.2e-08 63.2 222 26.1
Sabra17G0040900 Salix brachista HOM05D002011 ORTHO05D001948 3.2e-08 63.2 253 27.3
CiPaw.01G252000 Carya illinoinensis HOM05D002011 ORTHO05D001948 4.1e-08 62.8 276 26.4
Oeu029907.1 Olea europaea HOM05D002011 ORTHO05D001948 4.1e-08 62.8 249 32.1
BcaC07g41480 Brassica carinata HOM05D002011 ORTHO05D001948 5.4e-08 62.4 226 28.3
BcaB03g14520 Brassica carinata HOM05D002011 ORTHO05D001948 7.1e-08 62.0 223 27.4
Duzib192G0037 Durio zibethinus HOM05D002011 ORTHO05D001948 7.1e-08 62.0 262 35.5
Nn2g12257 Nelumbo nucifera HOM05D002011 ORTHO05D001948 9.2e-08 61.6 275 34.5
Ca_01028_v3 Cicer arietinum L. HOM05D002011 ORTHO05D001948 1.2e-07 61.2 103 42.7
Thhalv10025671m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 1.2e-07 61.2 118 39.8
Actinidia22311 Actinidia chinensis HOM05D002011 ORTHO05D001948 1.6e-07 60.8 111 36.0
C06p53920 Brassica napus HOM05D002011 ORTHO05D001948 1.6e-07 60.8 237 28.3
PGSC0003DMG400014198 Solanum tuberosum HOM05D002011 ORTHO05D001948 1.6e-07 60.8 89 42.7
Thecc.06G036100 Theobroma cacao HOM05D002011 ORTHO05D001948 2.7e-07 60.1 92 40.2
TAR636G1642 Trochodendron aralioides HOM05D002011 ORTHO05D001948 2.7e-07 60.1 282 27.7
CARHR239930 Cardamine hirsuta HOM05D002011 ORTHO05D001948 3.5e-07 59.7 118 39.8
BcaC09g51992 Brassica carinata HOM05D002011 ORTHO05D001948 6.0e-07 58.9 110 42.7
C01p06900 Brassica napus HOM05D002011 ORTHO05D001948 6.0e-07 58.9 110 42.7
BolC1t00687H Brassica oleracea HOM05D002011 ORTHO05D001948 6.0e-07 58.9 110 42.7
BraA01t00593Z Brassica rapa HOM05D002011 ORTHO05D001948 6.0e-07 58.9 106 43.4
A03p61210 Brassica napus HOM05D002011 ORTHO05D001948 7.8e-07 58.5 86 44.2
C06p29390 Brassica napus HOM05D000930 ORTHO05D001948 7.8e-07 58.5 225 27.6
BolC6t38103H Brassica oleracea HOM05D000930 ORTHO05D001948 7.8e-07 58.5 225 27.6
A01p06260 Brassica napus HOM05D002011 ORTHO05D001948 1.0e-06 58.2 109 42.2
DCAR_016285 Daucus carota HOM05D002011 ORTHO05D001948 1.0e-06 58.2 85 43.5
HanXRQChr02g0034871 Helianthus annuus HOM05D002011 ORTHO05D001948 1.0e-06 58.2 221 29.0
BolC6t40406H Brassica oleracea HOM05D002011 ORTHO05D001948 1.3e-06 57.8 234 28.2
MELO3C023456.2 Cucumis melo HOM05D002011 ORTHO05D001948 1.3e-06 57.8 76 47.4
Glyma.06G065100 Glycine max HOM05D002011 ORTHO05D001948 1.3e-06 57.8 262 27.1
QL02p020109 Quercus lobata HOM05D002011 ORTHO05D001948 1.3e-06 57.8 118 37.3
Sp7g29830 Schrenkiella parvula HOM05D002011 ORTHO05D001948 1.3e-06 57.8 89 42.7
Carub.0007s0852 Capsella rubella HOM05D002011 ORTHO05D001948 1.7e-06 57.4 87 42.5
Cfa013098 Carpinus fangiana HOM05D002011 ORTHO05D001948 1.7e-06 57.4 111 37.8
MELO3C011282.2 Cucumis melo HOM05D002011 ORTHO05D001948 1.7e-06 57.4 89 40.4
MBI14_g15651_MAGBIO Magnolia biondii HOM05D002011 ORTHO05D001948 1.7e-06 57.4 111 38.7
TWI75G1045 Tripterygium wilfordii HOM05D002011 ORTHO05D001948 1.7e-06 57.4 91 38.5
AL7G19860 Arabidopsis lyrata HOM05D002011 ORTHO05D001948 2.3e-06 57.0 119 40.3
A07p26760 Brassica napus HOM05D000930 ORTHO05D001948 2.3e-06 57.0 226 28.3
BraA03t15165Z Brassica rapa HOM05D002011 ORTHO05D001948 2.3e-06 57.0 81 44.4
CsaV3_2G032320 Cucumis sativus L. HOM05D002011 ORTHO05D001948 2.3e-06 57.0 89 40.4
Glyma.04G063900 Glycine max HOM05D002011 ORTHO05D001948 2.3e-06 57.0 262 26.3
Sed0005888 Sechium edule HOM05D002011 ORTHO05D001948 2.3e-06 57.0 118 36.4
THA.LOC104813311 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 2.3e-06 57.0 196 30.1
TAR383G0822 Trochodendron aralioides HOM05D002011 ORTHO05D001948 2.3e-06 57.0 278 30.6
C05p23870 Brassica napus HOM05D002011 ORTHO05D001948 3.0e-06 56.6 75 42.7
Ciclev10009242m.g Citrus clementina HOM05D002011 ORTHO05D001948 3.0e-06 56.6 113 38.9
BraA07t30319Z Brassica rapa HOM05D000930 ORTHO05D001948 3.9e-06 56.2 236 26.3
CSS0040463 Camellia sinensis var. sinensis HOM05D002011 ORTHO05D001948 3.9e-06 56.2 72 45.8
Oeu009209.1 Olea europaea HOM05D002011 ORTHO05D001948 3.9e-06 56.2 87 44.8
BcaB05g25241 Brassica carinata HOM05D002011 ORTHO05D001948 5.1e-06 55.8 227 26.0
A02p23330 Brassica napus HOM05D002011 ORTHO05D001948 5.1e-06 55.8 235 27.2
Actinidia13206 Actinidia chinensis HOM05D002011 ORTHO05D001948 6.6e-06 55.5 250 25.6
Cpa.g.sc127.2 Carica papaya HOM05D002011 ORTHO05D001948 8.6e-06 55.1 110 38.2
CiPaw.07G227200 Carya illinoinensis HOM05D002011 ORTHO05D001948 8.6e-06 55.1 120 35.8


User provided reference genes

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