Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14777 Utricularia gibba HOM05D003500 ORTHO05D003919 3.4e-147 525.0 275 100.0
SGA_v2.0_scaffold68G23002 Striga asiatica HOM05D003500 ORTHO05D003919 1.9e-28 130.6 251 40.6
Migut.D01030 Erythranthe guttata HOM05D003500 ORTHO05D003919 3.2e-28 129.8 250 40.8
Migut.I00867 Erythranthe guttata HOM05D003500 ORTHO05D003919 2.3e-26 123.6 244 40.2
SalBow2G0526 Salvia bowleyana HOM05D003500 ORTHO05D003919 3.3e-25 119.8 250 36.0
MSTRG.4733 Avicennia marina HOM05D003500 ORTHO05D003919 2.8e-24 116.7 255 40.0
SalBow2G3431 Salvia bowleyana HOM05D003500 ORTHO05D003919 6.1e-19 99.0 245 37.1
Oeu000451.1 Olea europaea HOM05D003500 ORTHO05D003919 9.1e-15 85.1 135 44.4
FvH4_6g31220 Fragaria vesca HOM05D003500 ORTHO05D003919 1.3e-13 81.3 241 30.7
Manes.11G047100 Manihot esculenta HOM05D003500 ORTHO05D003919 2.9e-13 80.1 167 40.7
FAN14G5419 Fragaria x ananassa HOM05D003500 ORTHO05D003919 3.8e-13 79.7 263 30.0
Ca_20390_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 5.0e-13 79.3 244 31.6
Dinv30507 Davidia involucrata HOM05D003500 ORTHO05D003919 5.0e-13 79.3 133 41.4
RcHm_v2.0_Chr2g0137891 Rosa chinensis HOM05D003500 ORTHO05D003919 5.0e-13 79.3 242 32.2
CiPaw.01G239100 Carya illinoinensis HOM05D003500 ORTHO05D003919 8.5e-13 78.6 138 42.0
Prupe.3G070800 Prunus persica HOM05D003500 ORTHO05D003919 1.5e-12 77.8 266 32.0
C06p07810 Brassica napus HOM05D003500 ORTHO05D003919 3.2e-12 76.6 245 31.4
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 7.2e-12 75.5 135 40.0
SGA_v2.0_scaffold37G14827 Striga asiatica HOM05D003500 ORTHO05D003919 7.2e-12 75.5 240 32.1
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 9.4e-12 75.1 132 37.9
Thhalv10012010m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 1.2e-11 74.7 247 31.6
Nitab4.5_0000671g0100 Nicotiana tabacum HOM05D003500 ORTHO05D003919 1.2e-11 74.7 129 40.3
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.6e-11 74.3 277 27.8
BolC6t35867H Brassica oleracea HOM05D003500 ORTHO05D003919 2.1e-11 73.9 245 31.0
BcaC08g43415 Brassica carinata HOM05D003500 ORTHO05D003919 2.7e-11 73.6 245 31.0
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 2.7e-11 73.6 135 40.7
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 3.6e-11 73.2 277 28.5
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 4.7e-11 72.8 235 31.5
Nitab4.5_0005851g0060 Nicotiana tabacum HOM05D003500 ORTHO05D003919 8.0e-11 72.0 128 39.8
Thecc.06G088400 Theobroma cacao HOM05D003500 ORTHO05D003919 1.0e-10 71.6 128 39.1
PGR102G2146 Punica granatum HOM05D003500 ORTHO05D003919 1.4e-10 71.2 257 34.6
A06p01860 Brassica napus HOM05D003500 ORTHO05D003919 1.8e-10 70.9 245 30.6
Haze_16428 Corylus avellana HOM05D003500 ORTHO05D003919 3.0e-10 70.1 268 31.3
Rhsim08G0221500 Rhododendron simsii HOM05D003500 ORTHO05D003919 3.0e-10 70.1 129 40.3
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 4.0e-10 69.7 135 38.5
VMungo1127G1234 Vigna mungo HOM05D003500 ORTHO05D003919 4.0e-10 69.7 251 30.3
BraA06t23403Z Brassica rapa HOM05D003500 ORTHO05D003919 5.2e-10 69.3 245 30.6
Peaxi162Scf00015g10038 Petunia axillaris HOM05D003500 ORTHO05D003919 5.2e-10 69.3 123 40.7
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 5.2e-10 69.3 242 32.6
SHI10927 Sapria himalayana HOM05D003500 ORTHO05D003919 5.2e-10 69.3 138 40.6
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 5.2e-10 69.3 134 41.8
BcaB02g11002 Brassica carinata HOM05D003500 ORTHO05D003919 6.7e-10 68.9 245 30.6
Sp1g38960 Schrenkiella parvula HOM05D003500 ORTHO05D003919 6.7e-10 68.9 245 31.0
Sc12g0009290 Simmondsia chinensis HOM05D003500 ORTHO05D003919 6.7e-10 68.9 135 38.5
Solyc03g120180.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 6.7e-10 68.9 120 39.2
Carub.0001s4135 Capsella rubella HOM05D003500 ORTHO05D003919 8.8e-10 68.6 253 31.2
vmacro18911 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 1.1e-09 68.2 302 29.8
Eucgr.F03015 Eucalyptus grandis HOM05D003500 ORTHO05D003919 1.5e-09 67.8 117 39.3
Actinidia32755 Actinidia chinensis HOM05D003500 ORTHO05D003919 2.0e-09 67.4 232 32.8
arahy.Tifrunner.gnm1.ann1.Y86J0E Arachis hypogaea HOM05D003500 ORTHO05D003919 2.6e-09 67.0 121 38.0
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 4.4e-09 66.2 283 26.9
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 5.7e-09 65.9 272 29.8
arahy.Tifrunner.gnm1.ann1.AD7SDK Arachis hypogaea HOM05D003500 ORTHO05D003919 5.7e-09 65.9 121 37.2
Cfa002069 Carpinus fangiana HOM05D003500 ORTHO05D003919 5.7e-09 65.9 267 30.0
CsaV3_3G025090 Cucumis sativus L. HOM05D003500 ORTHO05D003919 5.7e-09 65.9 281 28.5
ClCG07G013080 Citrullus lanatus HOM05D003500 ORTHO05D003919 7.5e-09 65.5 293 28.0
COL.COLO4_30382 Corchorus olitorius HOM05D003500 ORTHO05D003919 7.5e-09 65.5 122 35.2
Gohir.A02G121400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 7.5e-09 65.5 128 36.7
Aqoxy7G01735 Aquilegia oxysepala HOM05D003500 ORTHO05D003919 9.7e-09 65.1 141 35.5
Gohir.D03G063800 Gossypium hirsutum HOM05D003500 ORTHO05D003919 9.7e-09 65.1 127 37.0
Lalb_Chr04g0262681 Lupinus albus HOM05D003500 ORTHO05D003919 9.7e-09 65.1 295 29.2
arahy.Tifrunner.gnm1.ann1.V41S3G Arachis hypogaea HOM05D003500 ORTHO05D003919 1.3e-08 64.7 261 27.2
Gorai.002G059400 Gossypium raimondii HOM05D003500 ORTHO05D003919 1.3e-08 64.7 128 36.7
QL05p023510 Quercus lobata HOM05D003500 ORTHO05D003919 1.3e-08 64.7 137 38.0
THA.LOC104810618 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 1.7e-08 64.3 241 32.8
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 2.2e-08 63.9 278 28.8
Lalb_Chr01g0012691 Lupinus albus HOM05D003500 ORTHO05D003919 2.2e-08 63.9 123 40.7
Lalb_Chr03g0029341 Lupinus albus HOM05D003500 ORTHO05D003919 2.2e-08 63.9 257 27.6
CARHR042490 Cardamine hirsuta HOM05D003500 ORTHO05D003919 2.8e-08 63.5 243 28.8
AUR62032393 Chenopodium quinoa HOM05D003500 ORTHO05D003919 2.8e-08 63.5 263 30.8
Phvul.011G117800 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 2.8e-08 63.5 246 29.7
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 2.8e-08 63.5 138 35.5
Sed0015651 Sechium edule HOM05D003500 ORTHO05D003919 2.8e-08 63.5 278 28.8
Duzib235G1266 Durio zibethinus HOM05D003500 ORTHO05D003919 3.7e-08 63.2 175 31.4
TWI18G0570 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 3.7e-08 63.2 259 30.9
CANSAT56G2888 Cannabis sativa HOM05D003500 ORTHO05D003919 4.8e-08 62.8 138 36.2
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 4.8e-08 62.8 130 33.8
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 4.8e-08 62.8 257 28.0
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 6.3e-08 62.4 140 40.0
AT1G52343 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 6.3e-08 62.4 247 31.6
Eucgr.C02880 Eucalyptus grandis HOM05D003500 ORTHO05D003919 1.1e-07 61.6 273 28.9
Lsat_1_v5_gn_1_49081 Lactuca sativa HOM05D003500 ORTHO05D003919 1.1e-07 61.6 260 32.7
Potri.003G055200 Populus trichocarpa HOM05D003500 ORTHO05D003919 1.1e-07 61.6 261 27.6
AL1G60570 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 1.4e-07 61.2 243 31.7
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 1.4e-07 61.2 135 36.3
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 1.4e-07 61.2 257 28.0
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 1.8e-07 60.8 269 27.9
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 2.4e-07 60.5 260 28.8
MD17G1194800 Malus domestica HOM05D003500 ORTHO05D003919 3.1e-07 60.1 296 29.7
AUR62024822 Chenopodium quinoa HOM05D003500 ORTHO05D003919 4.1e-07 59.7 263 29.7
Psat7g252240 Pisum sativum HOM05D003500 ORTHO05D003919 4.1e-07 59.7 126 34.9
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 7.0e-07 58.9 279 28.0
Medtr4g012520 Medicago truncatula HOM05D003500 ORTHO05D003919 7.0e-07 58.9 277 28.5
Ca_26668_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 9.1e-07 58.5 239 25.1
Manes.16G069800 Manihot esculenta HOM05D003500 ORTHO05D003919 9.1e-07 58.5 142 35.9
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 1.2e-06 58.2 260 27.7
Lj3g0021763 Lotus japonicus HOM05D003500 ORTHO05D003919 1.2e-06 58.2 284 32.0
Glyma.12G113900 Glycine max HOM05D003500 ORTHO05D003919 1.6e-06 57.8 238 29.8
Glyma.07G006100 Glycine max HOM05D003500 ORTHO05D003919 2.0e-06 57.4 299 26.8
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 2.7e-06 57.0 135 34.1
FAN27G2449 Fragaria x ananassa HOM05D003500 ORTHO05D003919 2.7e-06 57.0 137 34.3
TPR.G31013 Trifolium pratense HOM05D003500 ORTHO05D003919 2.7e-06 57.0 128 29.7
VMungo0331G1412 Vigna mungo HOM05D003500 ORTHO05D003919 2.7e-06 57.0 121 37.2
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 4.5e-06 56.2 136 33.8
CsaV3_2G031120 Cucumis sativus L. HOM05D003500 ORTHO05D003919 4.5e-06 56.2 286 28.7
Sed0003187 Sechium edule HOM05D003500 ORTHO05D003919 4.5e-06 56.2 138 30.4
arahy.Tifrunner.gnm1.ann1.HR3BJH Arachis hypogaea HOM05D003500 ORTHO05D003919 5.9e-06 55.8 255 26.3
Ciclev10027012m.g Citrus clementina HOM05D003500 ORTHO05D003919 5.9e-06 55.8 263 27.0
Medtr6g007370 Medicago truncatula HOM05D003500 ORTHO05D003919 5.9e-06 55.8 231 23.8
Medtr7g446310 Medicago truncatula HOM05D003500 ORTHO05D003919 5.9e-06 55.8 231 23.8
TPR.G21779 Trifolium pratense HOM05D003500 ORTHO05D003919 7.7e-06 55.5 128 28.9


User provided reference genes

Program Settings