Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14764 Utricularia gibba HOM05D005576 ORTHO05D007010 0.0e+00 1509.2 780 100.0
Migut.I01082 Erythranthe guttata HOM05D005576 ORTHO05D007010 9.7e-288 993.4 842 62.9
Dinv37863 Davidia involucrata HOM05D005576 ORTHO05D007010 1.9e-283 979.2 842 62.1
SGA_v2.0_scaffold71G23839 Striga asiatica HOM05D005576 ORTHO05D007010 1.1e-280 969.9 842 61.3
PGSC0003DMG400022883 Solanum tuberosum HOM05D005576 ORTHO05D007010 7.4e-280 967.2 843 60.0
CAN.G668.41 Capsicum annuum HOM05D005576 ORTHO05D007010 2.8e-279 965.3 842 60.2
Sopen03g041140 Solanum pennellii HOM05D005576 ORTHO05D007010 6.3e-279 964.1 843 59.9
Haze_16039 Corylus avellana HOM05D005576 ORTHO05D007010 5.5e-275 951.0 842 60.2
MSTRG.4792 Avicennia marina HOM05D005576 ORTHO05D007010 7.2e-275 950.7 843 60.6
SalBow6G0288 Salvia bowleyana HOM05D005576 ORTHO05D007010 4.7e-274 948.0 830 61.3
SalBow6G5091 Salvia bowleyana HOM05D005576 ORTHO05D007010 4.7e-274 948.0 830 61.3
GSVIVG01016742001 Vitis vinifera HOM05D005576 ORTHO05D007010 1.8e-273 946.0 842 59.9
Nitab4.5_0004422g0040 Nicotiana tabacum HOM05D005576 ORTHO05D007010 3.9e-273 944.9 831 59.6
Nitab4.5_0002898g0010 Nicotiana tabacum HOM05D005576 ORTHO05D007010 6.7e-273 944.1 831 59.4
Oeu000412.2 Olea europaea HOM05D005576 ORTHO05D007010 1.5e-272 943.0 838 60.3
TAR626G1694 Trochodendron aralioides HOM05D005576 ORTHO05D007010 4.4e-272 941.4 844 59.6
Prupe.3G039600 Prunus persica HOM05D005576 ORTHO05D007010 5.7e-272 941.0 842 60.0
Actinidia26024 Actinidia chinensis HOM05D005576 ORTHO05D007010 8.2e-271 937.2 842 58.4
Manes.11G019400 Manihot esculenta HOM05D005576 ORTHO05D007010 8.2e-271 937.2 844 58.8
MSTRG.10949 Avicennia marina HOM05D005576 ORTHO05D007010 5.3e-270 934.5 842 59.5
Cc04_g01260 Coffea canephora HOM05D005576 ORTHO05D007010 7.0e-270 934.1 843 58.4
Aqoxy7G04073 Aquilegia oxysepala HOM05D005576 ORTHO05D007010 1.2e-269 933.3 844 58.5
Gorai.011G059500 Gossypium raimondii HOM05D005576 ORTHO05D007010 4.5e-269 931.4 842 58.4
Dinv20428 Davidia involucrata HOM05D005576 ORTHO05D007010 1.0e-268 930.2 821 60.7
Thecc.06G121300 Theobroma cacao HOM05D005576 ORTHO05D007010 3.8e-268 928.3 842 58.6
Lsat_1_v5_gn_4_93500 Lactuca sativa HOM05D005576 ORTHO05D007010 5.0e-268 927.9 839 58.8
Gohir.A10G053800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 1.5e-267 926.4 842 58.2
COL.COLO4_30746 Corchorus olitorius HOM05D005576 ORTHO05D007010 4.2e-267 924.9 842 58.2
FAN02G3375 Fragaria x ananassa HOM05D005576 ORTHO05D007010 5.5e-267 924.5 784 61.5
HanXRQChr09g0276901 Helianthus annuus HOM05D005576 ORTHO05D007010 7.2e-267 924.1 842 59.3
CiPaw.01G218000 Carya illinoinensis HOM05D005576 ORTHO05D007010 4.7e-266 921.4 842 58.8
Lj5C36G17 Lonicera japonica HOM05D005576 ORTHO05D007010 1.0e-265 920.2 842 58.6
MD09G1181500 Malus domestica HOM05D005576 ORTHO05D007010 3.0e-265 918.7 842 58.3
RcHm_v2.0_Chr2g0145781 Rosa chinensis HOM05D005576 ORTHO05D007010 3.0e-265 918.7 842 58.0
Duzib235G0347 Durio zibethinus HOM05D005576 ORTHO05D007010 4.0e-265 918.3 842 57.5
QL05p004145 Quercus lobata HOM05D005576 ORTHO05D007010 5.2e-265 917.9 841 58.3
ECA232G2029 Erigeron canadensis HOM05D005576 ORTHO05D007010 1.5e-264 916.4 842 59.0
CsaV3_7G034420 Cucumis sativus L. HOM05D005576 ORTHO05D007010 3.3e-264 915.2 843 58.1
MD17G1167700 Malus domestica HOM05D005576 ORTHO05D007010 3.3e-264 915.2 842 58.0
MELO3C024350.2 Cucumis melo HOM05D005576 ORTHO05D007010 7.5e-264 914.1 843 57.8
EL10Ac7g16417 Beta vulgaris HOM05D005576 ORTHO05D007010 1.7e-263 912.9 843 58.7
Peaxi162Scf00038g02138 Petunia axillaris HOM05D005576 ORTHO05D007010 4.8e-263 911.4 926 53.9
vmacro22036 Vaccinium macrocarpon HOM05D005576 ORTHO05D007010 6.3e-263 911.0 838 57.8
ClCG09G001010 Citrullus lanatus HOM05D005576 ORTHO05D007010 1.4e-262 909.8 856 57.2
MBI13_g12059_MAGBIO Magnolia biondii HOM05D005576 ORTHO05D007010 5.3e-262 907.9 844 57.9
Atru.chr1.3999 Acer truncatum HOM05D005576 ORTHO05D007010 9.1e-262 907.1 842 58.3
Ah.08g216850 Amaranthus hybridus HOM05D005576 ORTHO05D007010 1.6e-261 906.4 838 58.7
Oeu015487.1 Olea europaea HOM05D005576 ORTHO05D007010 1.6e-261 906.4 812 59.9
FAN09G4405 Fragaria x ananassa HOM05D005576 ORTHO05D007010 3.5e-261 905.2 842 57.7
Nn8g38631 Nelumbo nucifera HOM05D005576 ORTHO05D007010 3.5e-261 905.2 844 57.1
Potri.003G066200 Populus trichocarpa HOM05D005576 ORTHO05D007010 3.5e-261 905.2 844 56.4
FvH4_6g34890 Fragaria vesca HOM05D005576 ORTHO05D007010 4.5e-261 904.8 842 57.5
Nn6g35707 Nelumbo nucifera HOM05D005576 ORTHO05D007010 5.9e-261 904.4 844 57.0
VMungo1309G3067 Vigna mungo HOM05D005576 ORTHO05D007010 7.7e-261 904.0 843 56.8
CANSAT56G3183 Cannabis sativa HOM05D005576 ORTHO05D007010 1.3e-260 903.3 842 56.5
AT1G72560 Arabidopsis thaliana HOM05D005576 ORTHO05D007010 2.2e-260 902.5 842 57.1
TWI31G0259 Tripterygium wilfordii HOM05D005576 ORTHO05D007010 2.2e-260 902.5 842 57.0
Thhalv10018070m.g Eutrema salsugineum HOM05D005576 ORTHO05D007010 3.8e-260 901.7 842 57.4
Potri.001G168100 Populus trichocarpa HOM05D005576 ORTHO05D007010 3.8e-260 901.7 842 56.3
Sed0003060 Sechium edule HOM05D005576 ORTHO05D007010 5.0e-260 901.4 843 56.9
Sc15g0000400 Simmondsia chinensis HOM05D005576 ORTHO05D007010 6.5e-260 901.0 842 57.5
CSS0000574 Camellia sinensis var. sinensis HOM05D005576 ORTHO05D007010 1.1e-259 900.2 842 57.1
THA.LOC104808055 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 1.1e-259 900.2 842 56.7
Lalb_Chr15g0076791 Lupinus albus HOM05D005576 ORTHO05D007010 3.2e-259 898.7 842 56.5
Actinidia25327 Actinidia chinensis HOM05D005576 ORTHO05D007010 1.2e-258 896.7 812 58.1
Lalb_Chr04g0261101 Lupinus albus HOM05D005576 ORTHO05D007010 2.1e-258 896.0 842 56.3
Lj1g0011724 Lotus japonicus HOM05D005576 ORTHO05D007010 2.0e-256 889.4 842 55.9
Ca_09568_v3 Cicer arietinum L. HOM05D005576 ORTHO05D007010 3.4e-256 888.6 842 56.4
Gohir.D10G055800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 4.4e-256 888.3 812 57.8
Aa31LG4G2910 Aethionema arabicum HOM05D005576 ORTHO05D007010 5.7e-256 887.9 843 56.6
PSO421G0066 Papaver somniferum HOM05D005576 ORTHO05D007010 7.5e-256 887.5 845 55.7
Solyc03g122370.4 Solanum lycopersicum HOM05D005576 ORTHO05D007010 7.5e-256 887.5 831 57.2
CARHR065500 Cardamine hirsuta HOM05D005576 ORTHO05D007010 9.8e-256 887.1 842 56.2
CiPaw.02G135100 Carya illinoinensis HOM05D005576 ORTHO05D007010 1.1e-254 883.6 842 56.5
Glyma.19G263400 Glycine max HOM05D005576 ORTHO05D007010 1.1e-254 883.6 842 56.5
Rhsim12G0210100 Rhododendron simsii HOM05D005576 ORTHO05D007010 2.4e-254 882.5 816 57.7
Psat3g000040 Pisum sativum HOM05D005576 ORTHO05D007010 3.1e-254 882.1 842 55.8
Sp5g27640 Schrenkiella parvula HOM05D005576 ORTHO05D007010 1.6e-253 879.8 842 55.7
TPR.G28874 Trifolium pratense HOM05D005576 ORTHO05D007010 3.5e-253 878.6 842 55.6
BolC6t39733H Brassica oleracea HOM05D005576 ORTHO05D007010 1.1e-251 873.6 844 55.7
BraA07t31429Z Brassica rapa HOM05D005576 ORTHO05D007010 1.1e-251 873.6 843 55.9
PSO063G0826 Papaver somniferum HOM05D005576 ORTHO05D007010 1.5e-251 873.2 821 56.3
A07p38760 Brassica napus HOM05D005576 ORTHO05D007010 1.9e-251 872.8 842 55.9
C06p46920 Brassica napus HOM05D005576 ORTHO05D007010 7.2e-251 870.9 844 55.6
Medtr7g117565 Medicago truncatula HOM05D005576 ORTHO05D007010 9.5e-251 870.5 843 55.3
THA.LOC104812251 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 1.6e-250 869.8 842 55.2
Carub.0002s1942 Capsella rubella HOM05D005576 ORTHO05D007010 2.8e-250 869.0 842 55.5
arahy.Tifrunner.gnm1.ann1.E27NE4 Arachis hypogaea HOM05D005576 ORTHO05D007010 1.5e-248 863.2 846 55.4
PGR102G0536 Punica granatum HOM05D005576 ORTHO05D007010 2.6e-248 862.4 849 56.7
DCAR_026415 Daucus carota HOM05D005576 ORTHO05D007010 4.9e-247 858.2 812 55.5
AL2G32250 Arabidopsis lyrata HOM05D005576 ORTHO05D007010 3.5e-245 852.0 842 54.8
Sabra03G0038700 Salix brachista HOM05D005576 ORTHO05D007010 7.8e-245 850.9 812 55.2
Glyma.03G264400 Glycine max HOM05D005576 ORTHO05D007010 1.7e-244 849.7 840 54.9
arahy.Tifrunner.gnm1.ann1.W8MD5J Arachis hypogaea HOM05D005576 ORTHO05D007010 5.0e-244 848.2 876 53.5
Ciclev10024809m.g Citrus clementina HOM05D005576 ORTHO05D007010 2.8e-242 842.4 842 55.6
Duzib160G0875 Durio zibethinus HOM05D005576 ORTHO05D007010 1.7e-239 833.2 845 54.2
Hund18687 Selenicereus undatus HOM05D005576 ORTHO05D007010 2.3e-233 812.8 796 55.9
AUR62009889 Chenopodium quinoa HOM05D005576 ORTHO05D007010 9.8e-232 807.4 827 54.3
AUR62001476 Chenopodium quinoa HOM05D005576 ORTHO05D007010 1.7e-231 806.6 812 54.4
FAN14G0396 Fragaria x ananassa HOM05D005576 ORTHO05D007010 6.4e-231 804.7 770 56.4
ATR0598G079 Amborella trichopoda HOM05D005576 ORTHO05D007010 1.2e-224 783.9 821 51.5
Lj9A532T67 Lonicera japonica HOM05D005576 ORTHO05D007010 2.2e-223 779.6 751 57.0
Oeu015486.1 Olea europaea HOM05D005576 ORTHO05D007010 4.6e-221 771.9 650 63.2
CDE05G1788 Ceratophyllum demersum HOM05D005576 ORTHO05D007010 2.8e-218 762.7 841 48.5
Phvul.009G263000 Phaseolus vulgaris HOM05D005576 ORTHO05D007010 4.6e-213 745.3 725 56.3
Zm00001eb109040 Zea mays HOM05D005576 ORTHO05D007010 5.8e-200 701.8 847 46.9
Zm00001eb327340 Zea mays HOM05D005576 ORTHO05D007010 4.9e-199 698.7 847 47.0
Os07g0613300 Oryza sativa ssp. japonica HOM05D005576 ORTHO05D007010 1.4e-193 680.6 848 45.8
CDE11G0151 Ceratophyllum demersum HOM05D005576 ORTHO05D007010 4.3e-187 659.1 785 47.1
Mapoly0019s0146 Marchantia polymorpha HOM05D005576 ORTHO05D007010 1.7e-183 647.1 851 42.7
HPP92_026306 Vanilla planifolia HOM05D005576 ORTHO05D007010 1.1e-182 644.4 743 48.9
Pp3c12_21910 Physcomitrium patens HOM05D005576 ORTHO05D007010 1.6e-181 640.6 844 42.7
Actinidia27733 Actinidia chinensis HOM05D005576 ORTHO05D007010 2.1e-181 640.2 612 57.0
Eucgr.F04406 Eucalyptus grandis HOM05D005576 ORTHO05D007010 3.0e-180 636.3 713 50.1
Actinidia26822 Actinidia chinensis HOM05D005576 ORTHO05D007010 4.8e-178 629.0 599 56.9
SEGI_13199 Sequoiadendron giganteum HOM05D005576 ORTHO05D007010 9.7e-163 578.2 661 48.1
SMO141G0108 Selaginella moellendorffii HOM05D005576 ORTHO05D007010 3.1e-161 573.2 834 40.6
FAN05G3283 Fragaria x ananassa HOM05D005576 ORTHO05D007010 1.0e-151 541.6 459 60.1
AagrBONN_evm.TU.Sc2ySwM_344.1866 Anthoceros agrestis HOM05D005576 ORTHO05D007010 4.8e-138 496.1 838 37.2
CBR_g44922 Chara braunii HOM05D005576 ORTHO05D007010 7.0e-137 492.3 879 35.2
Cpa.g.sc589.4 Carica papaya HOM05D005576 ORTHO05D007010 1.1e-94 352.1 278 63.7
Dinv20426 Davidia involucrata HOM05D005576 ORTHO05D007010 4.2e-81 307.0 304 54.9
Aa31LG4G2950 Aethionema arabicum HOM05D005576 ORTHO05D007010 4.8e-77 293.5 356 48.3
Cpa.g.sc1732.1 Carica papaya HOM05D005576 ORTHO05D007010 6.2e-77 293.1 314 51.0
Cre12.g496200 Chlamydomonas reinhardtii HOM05D005576 ORTHO05D007010 1.9e-57 228.4 807 27.3
Actinidia26823 Actinidia chinensis HOM05D005576 ORTHO05D007010 4.1e-36 157.5 117 60.7
Actinidia27734 Actinidia chinensis HOM05D005576 ORTHO05D007010 4.1e-36 157.5 117 60.7
MCO02G354 Micromonas commoda HOM05D005576 ORTHO05D007010 2.7e-27 128.3 703 23.9
PRCOL_00005439 Prasinoderma coloniale HOM05D005576 ORTHO05D007010 3.4e-22 111.3 901 21.5
BcaB05g24764 Brassica carinata HOM05D005576 ORTHO05D007010 2.8e-21 108.2 121 51.2
HPP92_026305 Vanilla planifolia HOM05D005576 ORTHO05D007010 3.5e-19 101.3 86 50.0
SalBow5G4342 Salvia bowleyana HOM05D003448 ORTHO05D004028 8.0e-08 63.5 59 59.3


User provided reference genes

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