Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14733 Utricularia gibba HOM05D007311 ORTHO05D009011 2.2e-79 298.9 149 100.0
MSTRG.1753 Avicennia marina HOM05D007311 ORTHO05D009011 5.7e-64 247.7 149 80.5
SalBow3G0367 Salvia bowleyana HOM05D007311 ORTHO05D009011 6.1e-58 227.6 147 76.9
Migut.E01383 Erythranthe guttata HOM05D007311 ORTHO05D009011 8.9e-57 223.8 149 73.2
GSVIVG01036913001 Vitis vinifera HOM05D007311 ORTHO05D009011 5.0e-52 208.0 149 65.1
Aqoxy102s011 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 6.6e-52 207.6 149 67.1
Aqoxy2G03516 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 6.6e-52 207.6 149 67.1
Cc01_g03300 Coffea canephora HOM05D007311 ORTHO05D009011 1.5e-51 206.5 149 69.1
Ciclev10002031m.g Citrus clementina HOM05D007311 ORTHO05D009011 1.9e-51 206.1 149 65.1
TWI32G0505 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 1.9e-51 206.1 149 68.5
CiPaw.11G077300 Carya illinoinensis HOM05D007311 ORTHO05D009011 3.3e-51 205.3 149 65.8
Gohir.D08G169100 Gossypium hirsutum HOM05D007311 ORTHO05D009011 3.3e-51 205.3 149 66.4
SGA_v2.0_scaffold144G35891 Striga asiatica HOM05D007311 ORTHO05D009011 3.3e-51 205.3 166 63.3
MD16G1286900 Malus domestica HOM05D007311 ORTHO05D009011 4.3e-51 204.9 149 64.4
EL10Ac9g22274 Beta vulgaris HOM05D007311 ORTHO05D009011 1.2e-50 203.4 149 68.5
Duzib205G2009 Durio zibethinus HOM05D007311 ORTHO05D009011 1.2e-50 203.4 149 65.1
RcHm_v2.0_Chr7g0214961 Rosa chinensis HOM05D007311 ORTHO05D009011 1.6e-50 203.0 149 65.1
QL12p002522 Quercus lobata HOM05D007311 ORTHO05D009011 2.1e-50 202.6 149 65.1
AUR62039076 Chenopodium quinoa HOM05D007311 ORTHO05D009011 2.8e-50 202.2 149 68.5
PGR031G0344 Punica granatum HOM05D007311 ORTHO05D009011 2.8e-50 202.2 149 65.8
Nn3g18546 Nelumbo nucifera HOM05D007311 ORTHO05D009011 3.6e-50 201.8 148 64.9
arahy.Tifrunner.gnm1.ann1.C28JQA Arachis hypogaea HOM05D007311 ORTHO05D009011 4.7e-50 201.4 149 65.8
arahy.Tifrunner.gnm1.ann1.M0M2WX Arachis hypogaea HOM05D007311 ORTHO05D009011 4.7e-50 201.4 149 65.8
Manes.15G187600 Manihot esculenta HOM05D007311 ORTHO05D009011 6.2e-50 201.1 149 65.1
Glyma.19G247100 Glycine max HOM05D007311 ORTHO05D009011 1.8e-49 199.5 149 64.4
Nitab4.5_0000623g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 1.8e-49 199.5 147 66.7
Lsat_1_v5_gn_9_12020 Lactuca sativa HOM05D007311 ORTHO05D009011 4.0e-49 198.4 149 63.8
Lj1g0003439 Lotus japonicus HOM05D007311 ORTHO05D009011 5.2e-49 198.0 149 63.1
Lalb_Chr15g0076111 Lupinus albus HOM05D007311 ORTHO05D009011 6.8e-49 197.6 149 63.1
Glyma.03G249600 Glycine max HOM05D007311 ORTHO05D009011 8.9e-49 197.2 149 62.4
Gohir.A08G147900 Gossypium hirsutum HOM05D007311 ORTHO05D009011 1.2e-48 196.8 149 65.1
THA.LOC104811225 Tarenaya hassleriana HOM05D007311 ORTHO05D009011 1.2e-48 196.8 149 64.4
Hma1.2p1_0294F.1_g116450 Hydrangea macrophylla HOM05D007311 ORTHO05D009011 1.5e-48 196.4 146 66.4
Hund06317 Selenicereus undatus HOM05D007311 ORTHO05D009011 2.0e-48 196.1 149 64.4
COL.COLO4_16729 Corchorus olitorius HOM05D007311 ORTHO05D009011 2.6e-48 195.7 149 63.1
Peaxi162Scf00330g01216 Petunia axillaris HOM05D007311 ORTHO05D009011 2.6e-48 195.7 147 64.6
ECA233G4235 Erigeron canadensis HOM05D007311 ORTHO05D009011 3.4e-48 195.3 152 64.5
Oeu031947.3 Olea europaea HOM05D007311 ORTHO05D009011 4.4e-48 194.9 169 59.8
Potri.003G106700 Populus trichocarpa HOM05D007311 ORTHO05D009011 4.4e-48 194.9 150 67.3
Nitab4.5_0007008g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 5.8e-48 194.5 147 65.3
DCAR_030948 Daucus carota HOM05D007311 ORTHO05D009011 7.5e-48 194.1 149 65.1
PSO210G1792 Papaver somniferum HOM05D007311 ORTHO05D009011 7.5e-48 194.1 147 61.9
Prupe.5G015700 Prunus persica HOM05D007311 ORTHO05D009011 9.8e-48 193.7 149 63.1
Aa31LG6G2000 Aethionema arabicum HOM05D007311 ORTHO05D009011 2.2e-47 192.6 149 63.1
Phvul.006G104200 Phaseolus vulgaris HOM05D007311 ORTHO05D009011 2.2e-47 192.6 149 62.4
VMungo0540G0453 Vigna mungo HOM05D007311 ORTHO05D009011 2.2e-47 192.6 149 63.1
Thecc.03G322100 Theobroma cacao HOM05D007311 ORTHO05D009011 3.7e-47 191.8 155 62.6
FAN08G0573 Fragaria x ananassa HOM05D007311 ORTHO05D009011 4.9e-47 191.4 145 62.8
PSO238G0022 Papaver somniferum HOM05D007311 ORTHO05D009011 4.9e-47 191.4 147 61.2
TAR629G0827 Trochodendron aralioides HOM05D007311 ORTHO05D009011 4.9e-47 191.4 149 61.7
ClCG07G011190 Citrullus lanatus HOM05D000351 ORTHO05D000250 8.3e-47 190.7 149 57.0
Eucgr.E01832 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.1e-46 190.3 150 64.7
CAN.G22.34 Capsicum annuum HOM05D007311 ORTHO05D009011 1.4e-46 189.9 147 64.6
Cfa012633 Carpinus fangiana HOM05D007311 ORTHO05D009011 1.4e-46 189.9 137 65.7
Psat0s3161g0160 Pisum sativum HOM05D007311 ORTHO05D009011 1.4e-46 189.9 149 62.4
TPR.G7011 Trifolium pratense HOM05D007311 ORTHO05D009011 1.4e-46 189.9 149 61.1
Ca_09529_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 1.9e-46 189.5 149 62.4
Sp7g18020 Schrenkiella parvula HOM05D007311 ORTHO05D009011 4.1e-46 188.3 149 62.4
Solyc08g075070.3 Solanum lycopersicum HOM05D007311 ORTHO05D009011 5.4e-46 188.0 147 63.9
MELO3C016211.2 Cucumis melo HOM05D007311 ORTHO05D009011 7.0e-46 187.6 149 57.0
CARHR226190 Cardamine hirsuta HOM05D007311 ORTHO05D009011 1.2e-45 186.8 149 61.1
CsaV3_4G007060 Cucumis sativus L. HOM05D007311 ORTHO05D009011 1.2e-45 186.8 149 57.0
FvH4_5g24490 Fragaria vesca HOM05D007311 ORTHO05D009011 1.2e-45 186.8 173 55.5
FAN18G0784 Fragaria x ananassa HOM05D007311 ORTHO05D009011 2.7e-45 185.7 173 54.9
HanXRQChr07g0198461 Helianthus annuus HOM05D007311 ORTHO05D009011 2.7e-45 185.7 150 61.3
Sed0011898 Sechium edule HOM05D000351 ORTHO05D000250 2.7e-45 185.7 146 56.8
CANSAT35G1819 Cannabis sativa HOM05D000351 ORTHO05D000250 3.5e-45 185.3 154 59.7
Medtr7g115450 Medicago truncatula HOM05D007311 ORTHO05D009011 3.5e-45 185.3 149 59.7
Medtr7g115470 Medicago truncatula HOM05D007311 ORTHO05D009011 3.5e-45 185.3 149 59.7
vmacro22112 Vaccinium macrocarpon HOM05D007311 ORTHO05D009011 3.5e-45 185.3 172 58.1
BcaC09g51414 Brassica carinata HOM05D007311 ORTHO05D009011 4.6e-45 184.9 149 59.7
Carub.0007s2183 Capsella rubella HOM05D007311 ORTHO05D009011 1.0e-44 183.7 150 60.7
Sabra03G0073500 Salix brachista HOM05D007311 ORTHO05D009011 1.0e-44 183.7 150 62.0
Thhalv10024796m.g Eutrema salsugineum HOM05D000351 ORTHO05D009011 1.3e-44 183.3 149 60.4
BraA01t01079Z Brassica rapa HOM05D007311 ORTHO05D009011 1.7e-44 183.0 149 58.4
C01p13360 Brassica napus HOM05D007311 ORTHO05D009011 2.3e-44 182.6 149 59.1
Gorai.004G176300 Gossypium raimondii HOM05D007311 ORTHO05D009011 3.0e-44 182.2 187 52.4
A01p11360 Brassica napus HOM05D000351 ORTHO05D009011 3.9e-44 181.8 149 57.7
AL7G34740 Arabidopsis lyrata HOM05D007311 ORTHO05D009011 1.9e-43 179.5 150 59.3
ATR0796G066 Amborella trichopoda HOM05D007311 ORTHO05D009011 2.5e-43 179.1 149 57.7
AT4G19400 Arabidopsis thaliana HOM05D007311 ORTHO05D009011 3.3e-43 178.7 150 58.7
AT4G19410 Arabidopsis thaliana HOM05D000351 ORTHO05D009011 3.3e-43 178.7 150 58.7
BcaNung01781 Brassica carinata HOM05D007311 ORTHO05D009011 4.3e-43 178.3 149 57.0
Sc18g0005580 Simmondsia chinensis HOM05D007311 ORTHO05D009011 2.1e-42 176.0 139 61.2
Haze_08033 Corylus avellana HOM05D007311 ORTHO05D009011 4.7e-42 174.9 214 45.8
CDE11G0786 Ceratophyllum demersum HOM05D007311 ORTHO05D009011 1.1e-41 173.7 149 53.7
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 6.8e-41 171.0 132 63.6
PGSC0003DMG400020814 Solanum tuberosum HOM05D007311 ORTHO05D009011 2.0e-40 169.5 175 53.1
HPP92_005283 Vanilla planifolia HOM05D007311 ORTHO05D009011 3.4e-40 168.7 145 53.8
AUR62010310 Chenopodium quinoa HOM05D007311 ORTHO05D009011 5.8e-40 167.9 121 67.8
Zm00001eb284430 Zea mays HOM05D007311 ORTHO05D009011 2.9e-39 165.6 146 54.1
Cpa.g.sc542.2 Carica papaya HOM05D007311 ORTHO05D009011 3.9e-36 155.2 125 60.0
QL12p002612 Quercus lobata HOM05D007311 ORTHO05D009011 6.6e-36 154.5 148 52.7
Os05g0241400 Oryza sativa ssp. japonica HOM05D007311 ORTHO05D009011 1.8e-33 146.4 118 58.5
CSS0046759 Camellia sinensis var. sinensis HOM05D007311 ORTHO05D009011 1.5e-32 143.3 112 65.2
Dinv37446 Davidia involucrata HOM05D007311 ORTHO05D009011 9.2e-30 134.0 105 62.9
TWI60G1527 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 7.3e-27 124.4 149 46.3
Ah.01g011070 Amaranthus hybridus HOM05D007311 ORTHO05D009011 1.8e-25 119.8 105 60.0
Sopen08g023700 Solanum pennellii HOM05D007311 ORTHO05D009011 2.0e-24 116.3 95 58.9
SEGI_31752 Sequoiadendron giganteum HOM05D007311 ORTHO05D009011 4.2e-22 108.6 102 52.0
Eucgr.E01790 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.3e-18 97.1 82 58.5
SalBow1G6002 Salvia bowleyana HOM05D007311 ORTHO05D009011 2.8e-18 95.9 74 68.9
SalBow8G5581 Salvia bowleyana HOM05D007311 ORTHO05D009011 6.2e-18 94.7 66 71.2
Eucgr.E01869 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.8e-17 93.2 67 70.1
AagrBONN_evm.TU.Sc2ySwM_228.4293 Anthoceros agrestis HOM05D007311 ORTHO05D009011 2.4e-17 92.8 146 32.2
SMO139G0010 Selaginella moellendorffii HOM05D007311 ORTHO05D009011 6.4e-15 84.7 152 32.9
Ciclev10003443m.g Citrus clementina HOM05D007311 ORTHO05D009011 1.4e-14 83.6 78 48.7
Mapoly0040s0015 Marchantia polymorpha HOM05D007311 ORTHO05D009011 4.2e-14 82.0 144 32.6
BcaC02g07636 Brassica carinata HOM05D007311 ORTHO05D009011 1.2e-13 80.5 104 47.1
Rhsim07G0141400 Rhododendron simsii HOM05D000351 ORTHO05D000250 1.8e-12 76.6 122 41.8
FAN13G1634 Fragaria x ananassa HOM05D007311 ORTHO05D009011 2.3e-12 76.3 45 66.7
Zm00001eb347540 Zea mays HOM05D007311 ORTHO05D009011 1.4e-09 67.0 65 47.7
Medtr5g045430 Medicago truncatula HOM05D007311 ORTHO05D009011 2.0e-08 63.2 67 52.2
Ca_12103_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 9.3e-06 54.3 39 66.7


User provided reference genes

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