Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14682 Utricularia gibba HOM05D005188 ORTHO05D006153 7.7e-86 320.5 165 100.0
Migut.H00702 Erythranthe guttata HOM05D005188 ORTHO05D006153 1.6e-67 259.6 170 78.8
MSTRG.2649 Avicennia marina HOM05D005188 ORTHO05D006153 8.0e-67 257.3 167 79.0
SalBow1G2748 Salvia bowleyana HOM05D005188 ORTHO05D006153 1.7e-64 249.6 165 76.4
SGA_v2.0_scaffold370G50114 Striga asiatica HOM05D005188 ORTHO05D006153 2.7e-62 242.3 165 76.4
Oeu037826.1 Olea europaea HOM05D005188 ORTHO05D006153 4.6e-62 241.5 168 73.8
CiPaw.03G121400 Carya illinoinensis HOM05D005188 ORTHO05D006153 1.0e-61 240.4 176 75.0
CsaV3_6G041600 Cucumis sativus L. HOM05D005188 ORTHO05D006153 1.5e-60 236.5 172 71.5
Hma1.2p1_0476F.1_g160790 Hydrangea macrophylla HOM05D005188 ORTHO05D006153 3.3e-60 235.3 173 74.0
MELO3C008060.2 Cucumis melo HOM05D005188 ORTHO05D006153 4.3e-60 235.0 173 71.7
Medtr3g095540 Medicago truncatula HOM05D005188 ORTHO05D006153 4.3e-60 235.0 174 72.4
TWI75G0084 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 4.3e-60 235.0 168 72.0
ClCG01G015380 Citrullus lanatus HOM05D005188 ORTHO05D006153 1.2e-59 233.4 173 71.1
QL02p001672 Quercus lobata HOM05D005188 ORTHO05D006153 1.6e-59 233.0 174 71.8
TWI79G1553 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 1.6e-59 233.0 168 72.0
CAN.G792.16 Capsicum annuum HOM05D005188 ORTHO05D006153 2.8e-59 232.3 170 74.1
Aqoxy5G02315 Aquilegia oxysepala HOM05D005188 ORTHO05D006153 3.6e-59 231.9 173 71.1
Cfa002897 Carpinus fangiana HOM05D005188 ORTHO05D006153 4.7e-59 231.5 176 72.7
Lj1g0024625 Lotus japonicus HOM05D005188 ORTHO05D006153 4.7e-59 231.5 169 72.8
Dinv24366 Davidia involucrata HOM05D005188 ORTHO05D006153 6.2e-59 231.1 172 72.7
CANSAT01G0911 Cannabis sativa HOM05D005188 ORTHO05D006153 8.0e-59 230.7 170 71.2
Cpa.g.sc3.345 Carica papaya HOM05D005188 ORTHO05D006153 8.0e-59 230.7 174 69.0
Haze_25240 Corylus avellana HOM05D005188 ORTHO05D006153 1.0e-58 230.3 176 72.2
Lalb_Chr13g0296451 Lupinus albus HOM05D005188 ORTHO05D006153 1.0e-58 230.3 176 71.0
Cc10_g12590 Coffea canephora HOM05D005188 ORTHO05D006153 1.4e-58 229.9 172 72.1
CiPaw.04G081900 Carya illinoinensis HOM05D005188 ORTHO05D006153 2.3e-58 229.2 177 70.1
Manes.12G156000 Manihot esculenta HOM05D005188 ORTHO05D006153 2.3e-58 229.2 174 70.7
Potri.007G105900 Populus trichocarpa HOM05D005188 ORTHO05D006153 2.3e-58 229.2 174 70.7
Sabra05G0052500 Salix brachista HOM05D005188 ORTHO05D006153 2.3e-58 229.2 174 71.3
TAR381G0300 Trochodendron aralioides HOM05D005188 ORTHO05D006153 2.3e-58 229.2 175 69.1
MBI06_g39404_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 3.1e-58 228.8 173 72.3
Thecc.01G132900 Theobroma cacao HOM05D005188 ORTHO05D006153 4.0e-58 228.4 176 68.8
Glyma.04G215800 Glycine max HOM05D005188 ORTHO05D006153 5.2e-58 228.0 169 71.0
Sed0010246 Sechium edule HOM05D005188 ORTHO05D006153 5.2e-58 228.0 170 69.4
Ciclev10002687m.g Citrus clementina HOM05D005188 ORTHO05D006153 6.8e-58 227.6 171 68.4
Ah.02g121530 Amaranthus hybridus HOM05D005188 ORTHO05D006153 8.9e-58 227.3 170 70.6
Prupe.4G271200 Prunus persica HOM05D005188 ORTHO05D006153 8.9e-58 227.3 171 69.6
Gohir.A11G226800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 1.2e-57 226.9 176 68.8
Potri.005G063300 Populus trichocarpa HOM05D005188 ORTHO05D006153 1.5e-57 226.5 174 69.5
Solyc08g013670.3 Solanum lycopersicum HOM05D005188 ORTHO05D006153 2.6e-57 225.7 168 69.6
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 3.4e-57 225.3 175 69.7
Gohir.D11G230800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 3.4e-57 225.3 176 68.2
MD15G1441800 Malus domestica HOM05D005188 ORTHO05D006153 3.4e-57 225.3 171 71.9
Ca_16917_v3 Cicer arietinum L. HOM05D005188 ORTHO05D006153 4.4e-57 224.9 172 68.6
TPR.G18740 Trifolium pratense HOM05D005188 ORTHO05D006153 4.4e-57 224.9 174 69.0
VMungo0251G2948 Vigna mungo HOM05D005188 ORTHO05D006153 4.4e-57 224.9 172 68.6
Sed0019160 Sechium edule HOM05D005188 ORTHO05D006153 7.5e-57 224.2 175 69.1
Phvul.002G269400 Phaseolus vulgaris HOM05D005188 ORTHO05D006153 1.3e-56 223.4 172 68.6
Hund23270 Selenicereus undatus HOM05D005188 ORTHO05D006153 1.3e-56 223.4 178 68.5
CDE08G0648 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 1.7e-56 223.0 174 70.1
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 1.7e-56 223.0 175 68.6
Nn2g12180 Nelumbo nucifera HOM05D005188 ORTHO05D006153 1.7e-56 223.0 175 68.0
Actinidia06616 Actinidia chinensis HOM05D005188 ORTHO05D006153 3.7e-56 221.9 174 67.8
Glyma.06G150300 Glycine max HOM05D005188 ORTHO05D006153 4.9e-56 221.5 169 70.4
Psat5g063680 Pisum sativum HOM05D005188 ORTHO05D006153 4.9e-56 221.5 171 68.4
PGR008G0006 Punica granatum HOM05D005188 ORTHO05D006153 4.9e-56 221.5 168 69.0
PGR119G0239 Punica granatum HOM05D005188 ORTHO05D006153 4.9e-56 221.5 168 69.0
CSS0010064 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 6.4e-56 221.1 177 68.4
CSS0045275 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 6.4e-56 221.1 177 68.4
Lj2A607T35 Lonicera japonica HOM05D005188 ORTHO05D006153 6.4e-56 221.1 174 70.7
COL.COLO4_35748 Corchorus olitorius HOM05D005188 ORTHO05D006153 8.3e-56 220.7 174 67.2
Peaxi162Scf01257g00019 Petunia axillaris HOM05D005188 ORTHO05D006153 8.3e-56 220.7 180 66.7
Lsat_1_v5_gn_1_10061 Lactuca sativa HOM05D005188 ORTHO05D006153 1.1e-55 220.3 174 68.4
Sopen08g004510 Solanum pennellii HOM05D005188 ORTHO05D006153 1.1e-55 220.3 170 68.8
MD01G1004300 Malus domestica HOM05D005188 ORTHO05D006153 1.4e-55 219.9 172 69.2
AUR62017881 Chenopodium quinoa HOM05D005188 ORTHO05D006153 1.9e-55 219.5 174 70.1
Rhsim10G0133700 Rhododendron simsii HOM05D005188 ORTHO05D006153 3.2e-55 218.8 174 68.4
Gorai.003G066700 Gossypium raimondii HOM05D005188 ORTHO05D006153 4.1e-55 218.4 183 65.6
vmacro12795 Vaccinium macrocarpon HOM05D005188 ORTHO05D006153 5.4e-55 218.0 174 67.2
HanXRQChr04g0107551 Helianthus annuus HOM05D005188 ORTHO05D006153 7.0e-55 217.6 168 70.2
Nitab4.5_0000673g0170 Nicotiana tabacum HOM05D005188 ORTHO05D006153 9.2e-55 217.2 172 69.8
Lj4g0001203 Lotus japonicus HOM05D005188 ORTHO05D006153 1.6e-54 216.5 168 70.2
MBI03_g42548_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 1.6e-54 216.5 172 66.9
PGSC0003DMG400005805 Solanum tuberosum HOM05D005188 ORTHO05D006153 1.6e-54 216.5 175 68.0
ATR0987G005 Amborella trichopoda HOM05D005188 ORTHO05D006153 7.8e-54 214.2 178 64.6
arahy.Tifrunner.gnm1.ann1.DJM1RY Arachis hypogaea HOM05D005188 ORTHO05D006153 1.0e-53 213.8 173 68.2
C09p09640 Brassica napus HOM05D005188 ORTHO05D006153 1.0e-53 213.8 171 66.7
HPP92_019391 Vanilla planifolia HOM05D005188 ORTHO05D006153 1.0e-53 213.8 168 67.3
arahy.Tifrunner.gnm1.ann1.V5WWJ8 Arachis hypogaea HOM05D005188 ORTHO05D006153 1.3e-53 213.4 173 67.1
Sabra07G0086700 Salix brachista HOM05D005188 ORTHO05D006153 1.7e-53 213.0 170 67.1
Aa31LG1G17870 Aethionema arabicum HOM05D005188 ORTHO05D006153 1.1e-52 210.3 173 64.2
Sp2g27110 Schrenkiella parvula HOM05D005188 ORTHO05D006153 1.1e-52 210.3 174 65.5
FvH4_1g24360 Fragaria vesca HOM05D005188 ORTHO05D006153 3.3e-52 208.8 170 69.4
FAN19G1208 Fragaria x ananassa HOM05D005188 ORTHO05D006153 3.3e-52 208.8 170 69.4
BcaB07g29717 Brassica carinata HOM05D005188 ORTHO05D006153 4.3e-52 208.4 173 67.1
CDE02G4401 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 4.3e-52 208.4 174 67.2
DCAR_001211 Daucus carota HOM05D005188 ORTHO05D006153 4.3e-52 208.4 173 65.3
BcaC01g02658 Brassica carinata HOM05D005188 ORTHO05D006153 5.6e-52 208.0 174 65.5
BcaC01g02659 Brassica carinata HOM05D005188 ORTHO05D006153 5.6e-52 208.0 174 65.5
CARHR277950 Cardamine hirsuta HOM05D005188 ORTHO05D006153 5.6e-52 208.0 173 65.9
BcaB02g09793 Brassica carinata HOM05D005188 ORTHO05D006153 7.3e-52 207.6 174 64.9
MBI06_g27435_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 7.3e-52 207.6 148 73.6
ECA247G1960 Erigeron canadensis HOM05D005188 ORTHO05D006153 9.5e-52 207.2 169 66.9
C02p63110 Brassica napus HOM05D005188 ORTHO05D006153 1.2e-51 206.8 172 65.1
BolC2t12383H Brassica oleracea HOM05D005188 ORTHO05D006153 1.2e-51 206.8 172 65.1
BcaC03g18240 Brassica carinata HOM05D005188 ORTHO05D006153 2.1e-51 206.1 172 65.1
BolC9t53875H Brassica oleracea HOM05D005188 ORTHO05D006153 3.6e-51 205.3 182 62.6
FAN28G1395 Fragaria x ananassa HOM05D002517 ORTHO05D003040 4.7e-51 204.9 168 68.5
Thhalv10005005m.g Eutrema salsugineum HOM05D005188 ORTHO05D006153 6.2e-51 204.5 174 63.8
PSO541G2775 Papaver somniferum HOM05D005188 ORTHO05D006153 6.2e-51 204.5 168 61.3
RcHm_v2.0_Chr2g0120891 Rosa chinensis HOM05D005188 ORTHO05D006153 1.4e-50 203.4 170 67.1
A06p30750 Brassica napus HOM05D005188 ORTHO05D006153 2.3e-50 202.6 172 64.0
Atru.chr4.905 Acer truncatum HOM05D005188 ORTHO05D006153 3.1e-50 202.2 169 63.9
PSO675G9377 Papaver somniferum HOM05D005188 ORTHO05D006153 3.1e-50 202.2 168 61.3
AL8G41300 Arabidopsis lyrata HOM05D005188 ORTHO05D006153 5.2e-50 201.4 174 64.9
AT5G64040 Arabidopsis thaliana HOM05D005188 ORTHO05D006153 8.9e-50 200.7 174 64.4
Oeu050119.1 Olea europaea HOM05D005188 ORTHO05D006153 1.2e-49 200.3 165 64.2
FAN26G2437 Fragaria x ananassa HOM05D002517 ORTHO05D006153 2.0e-49 199.5 170 68.2
Carub.0008s2482 Capsella rubella HOM05D005188 ORTHO05D006153 2.6e-49 199.1 174 64.4
GSVIVG01026478001 Vitis vinifera HOM05D005188 ORTHO05D006153 1.3e-48 196.8 165 63.6
THA.LOC104800083 Tarenaya hassleriana HOM05D005188 ORTHO05D006153 1.7e-48 196.4 174 59.8
EL10Ac6g15302 Beta vulgaris HOM05D005188 ORTHO05D006153 7.1e-47 191.0 129 76.7
BolC3t18491H Brassica oleracea HOM05D005188 ORTHO05D006153 5.6e-44 181.4 178 59.6
Os12g0189400 Oryza sativa ssp. japonica HOM05D005188 ORTHO05D006153 3.6e-43 178.7 152 62.5
Zm00001eb138650 Zea mays HOM05D005188 ORTHO05D006153 4.0e-42 175.3 165 58.8
A09p08510 Brassica napus HOM05D005188 ORTHO05D006153 5.2e-42 174.9 171 58.5
BraA09t36500Z Brassica rapa HOM05D005188 ORTHO05D006153 5.2e-42 174.9 171 58.5
Zm00001eb409220 Zea mays HOM05D005188 ORTHO05D006153 1.2e-41 173.7 162 57.4
SEGI_16120 Sequoiadendron giganteum HOM05D005188 ORTHO05D006153 1.3e-40 170.2 139 63.3
Eucgr.I00200 Eucalyptus grandis HOM05D005188 ORTHO05D006153 1.4e-39 166.8 144 64.6
Duzib264G0557 Durio zibethinus HOM05D005188 ORTHO05D006153 4.1e-39 165.2 146 63.7
Duzib147G0711 Durio zibethinus HOM05D005188 ORTHO05D006153 6.6e-37 157.9 146 63.0
Sc16g0003820 Simmondsia chinensis HOM05D005188 ORTHO05D006153 4.7e-35 151.8 142 62.7
C03p62290 Brassica napus HOM05D005188 ORTHO05D006153 8.9e-34 147.5 144 61.8
SMO144G0055 Selaginella moellendorffii HOM05D005188 ORTHO05D006153 1.3e-32 143.7 82 80.5
BraA06t26017Z Brassica rapa HOM05D005188 ORTHO05D006153 3.8e-32 142.1 142 59.9
BcaB04g17222 Brassica carinata HOM05D005188 ORTHO05D006153 1.5e-28 130.2 129 54.3
Mapoly0116s0042 Marchantia polymorpha HOM05D005188 ORTHO05D006153 1.6e-27 126.7 159 45.9
BcaB08g36594 Brassica carinata HOM05D005188 ORTHO05D006153 2.8e-27 125.9 74 81.1
BolC2t07163H Brassica oleracea HOM05D005188 ORTHO05D006153 6.2e-27 124.8 74 79.7
BolC7t41311H Brassica oleracea HOM05D005188 ORTHO05D006153 6.2e-27 124.8 72 81.9
AUR62003566 Chenopodium quinoa HOM05D005188 ORTHO05D006153 1.8e-26 123.2 171 49.1
BcaC04g18786 Brassica carinata HOM05D005188 ORTHO05D006153 3.1e-26 122.5 74 78.4
Duzib187G0538 Durio zibethinus HOM05D005188 ORTHO05D006153 2.6e-25 119.4 130 58.5
Cre02.g082500 Chlamydomonas reinhardtii HOM05D005188 ORTHO05D006153 2.2e-24 116.3 117 53.0
AagrBONN_evm.TU.Sc2ySwM_362.2803 Anthoceros agrestis HOM05D005188 ORTHO05D006153 6.7e-21 104.8 87 63.2
BcaC03g13890 Brassica carinata HOM05D005188 ORTHO05D006153 4.0e-18 95.5 74 63.5
Nitab4.5_0005544g0070 Nicotiana tabacum HOM05D005188 ORTHO05D006153 6.9e-18 94.7 108 56.5
MCO09G058 Micromonas commoda HOM05D005188 ORTHO05D006153 1.9e-15 86.7 142 41.5
PRCOL_00004565 Prasinoderma coloniale HOM05D005188 ORTHO05D006153 1.9e-15 86.7 79 53.2
CBR_g45633 Chara braunii HOM05D005188 ORTHO05D006153 1.2e-14 84.0 85 52.9
Nn5g28540 Nelumbo nucifera HOM05D005188 ORTHO05D006153 1.6e-14 83.6 104 52.9
BraA02t09233Z Brassica rapa HOM05D005188 ORTHO05D006153 2.1e-14 83.2 122 49.2
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 3.7e-11 72.4 105 47.6
A02p43130 Brassica napus HOM05D005188 ORTHO05D006153 1.4e-10 70.5 100 49.0
unitig_736.g22678 Utricularia gibba HOM05D005188 ORTHO05D006153 5.3e-10 68.6 77 54.5
C02p10930 Brassica napus HOM05D005188 ORTHO05D006153 1.4e-07 60.5 30 80.0


User provided reference genes

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