Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14658 Utricularia gibba HOM05D007198 ORTHO05D008969 2.0e-80 302.4 152 100.0
MSTRG.2886 Avicennia marina HOM05D007198 ORTHO05D008969 3.3e-43 178.7 182 54.4
Migut.H00436 Erythranthe guttata HOM05D007198 ORTHO05D008969 9.1e-41 170.6 183 54.1
DCAR_010899 Daucus carota HOM05D007198 ORTHO05D008969 5.2e-36 154.8 174 50.0
CAN.G836.78 Capsicum annuum HOM05D007198 ORTHO05D008969 8.8e-36 154.1 182 48.9
Peaxi162Scf00450g00621 Petunia axillaris HOM05D007198 ORTHO05D008969 1.2e-35 153.7 182 49.5
Actinidia16498 Actinidia chinensis HOM05D007198 ORTHO05D008969 2.0e-35 152.9 181 48.1
Solyc02g090750.4 Solanum lycopersicum HOM05D007198 ORTHO05D008969 7.5e-35 151.0 181 49.2
Cc07_g05960 Coffea canephora HOM05D007198 ORTHO05D008969 9.7e-35 150.6 181 46.4
Sopen02g035380 Solanum pennellii HOM05D007198 ORTHO05D008969 6.3e-34 147.9 181 48.6
Dinv39859 Davidia involucrata HOM05D007198 ORTHO05D008969 8.2e-34 147.5 181 47.5
ECA232G0395 Erigeron canadensis HOM05D007198 ORTHO05D008969 1.1e-33 147.1 183 44.3
SGA_v2.0_scaffold15G07292 Striga asiatica HOM05D007198 ORTHO05D008969 1.1e-33 147.1 184 48.9
Rhsim08G0101100 Rhododendron simsii HOM05D007198 ORTHO05D008969 2.4e-33 146.0 181 47.5
CANSAT01G0326 Cannabis sativa HOM05D007198 ORTHO05D008969 3.1e-33 145.6 185 45.9
MD02G1301600 Malus domestica HOM05D007198 ORTHO05D008969 3.1e-33 145.6 188 44.7
Prupe.7G134300 Prunus persica HOM05D007198 ORTHO05D008969 9.1e-33 144.1 200 42.0
PSO210G2416 Papaver somniferum HOM05D007198 ORTHO05D008969 2.0e-32 142.9 168 48.2
RcHm_v2.0_Chr2g0105351 Rosa chinensis HOM05D007198 ORTHO05D008969 3.5e-32 142.1 200 43.5
PSO170G6483 Papaver somniferum HOM05D007198 ORTHO05D008969 4.5e-32 141.7 172 48.3
CiPaw.01G018700 Carya illinoinensis HOM05D007198 ORTHO05D008969 7.7e-32 141.0 201 43.8
FvH4_1g15950 Fragaria vesca HOM05D007198 ORTHO05D008969 1.3e-31 140.2 182 46.2
Hma1.2p1_0461F.1_g157845 Hydrangea macrophylla HOM05D007198 ORTHO05D008969 1.3e-31 140.2 181 46.4
Lsat_1_v5_gn_4_166740 Lactuca sativa HOM05D007198 ORTHO05D008969 1.7e-31 139.8 181 44.2
QL06p041746 Quercus lobata HOM05D007198 ORTHO05D008969 2.9e-31 139.0 183 45.9
VMungo1215G1587 Vigna mungo HOM05D007198 ORTHO05D008969 2.9e-31 139.0 175 46.3
PGR102G0107 Punica granatum HOM05D007198 ORTHO05D008969 3.8e-31 138.7 184 44.0
Sc16g0004690 Simmondsia chinensis HOM05D007198 ORTHO05D008969 3.8e-31 138.7 182 46.7
Sed0013660 Sechium edule HOM05D007198 ORTHO05D008969 5.0e-31 138.3 182 44.0
Eucgr.H01658 Eucalyptus grandis HOM05D007198 ORTHO05D008969 6.5e-31 137.9 185 47.6
ClCG01G016780 Citrullus lanatus HOM05D007198 ORTHO05D008969 8.5e-31 137.5 169 46.7
Glyma.01G185700 Glycine max HOM05D007198 ORTHO05D008969 1.1e-30 137.1 175 46.9
Phvul.002G019200 Phaseolus vulgaris HOM05D007198 ORTHO05D008969 1.1e-30 137.1 175 46.9
CSS0000534 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 1.5e-30 136.7 181 45.9
CSS0048673 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 1.5e-30 136.7 181 45.9
Duzib264G0904 Durio zibethinus HOM05D007198 ORTHO05D008969 1.9e-30 136.3 163 46.6
Lj2g0004070 Lotus japonicus HOM05D007198 ORTHO05D008969 1.9e-30 136.3 176 45.5
Nitab4.5_0001034g0170 Nicotiana tabacum HOM05D007198 ORTHO05D008969 1.9e-30 136.3 167 49.7
AUR62001938 Chenopodium quinoa HOM05D000362 ORTHO05D008969 4.2e-30 135.2 180 46.1
Gorai.008G075300 Gossypium raimondii HOM05D007198 ORTHO05D008969 4.2e-30 135.2 172 43.6
Haze_15409 Corylus avellana HOM05D007198 ORTHO05D008969 5.5e-30 134.8 213 41.8
Manes.12G101406 Manihot esculenta HOM05D007198 ORTHO05D008969 5.5e-30 134.8 193 45.1
Nn1g04876 Nelumbo nucifera HOM05D007198 ORTHO05D008969 5.5e-30 134.8 181 43.1
CsaV3_6G043210 Cucumis sativus L. HOM05D007198 ORTHO05D008969 7.2e-30 134.4 172 45.3
BcaC01g00428 Brassica carinata HOM05D007198 ORTHO05D008969 9.4e-30 134.0 189 42.9
HanXRQChr07g0191591 Helianthus annuus HOM05D007198 ORTHO05D008969 1.6e-29 133.3 181 40.9
MD02G1301800 Malus domestica HOM05D007198 ORTHO05D008969 1.6e-29 133.3 200 41.0
TWI09G1591 Tripterygium wilfordii HOM05D007198 ORTHO05D008969 1.6e-29 133.3 173 45.7
FAN19G3022 Fragaria x ananassa HOM05D007198 ORTHO05D008969 2.1e-29 132.9 190 44.2
AUR62003873 Chenopodium quinoa HOM05D007198 ORTHO05D008969 3.6e-29 132.1 180 46.1
Gohir.D12G068800 Gossypium hirsutum HOM05D007198 ORTHO05D008969 3.6e-29 132.1 172 43.0
GSVIVG01022140001 Vitis vinifera HOM05D007198 ORTHO05D008969 3.6e-29 132.1 181 44.8
Lj4A144T46 Lonicera japonica HOM05D007198 ORTHO05D008969 4.7e-29 131.7 101 59.4
TPR.G21270 Trifolium pratense HOM05D007198 ORTHO05D008969 4.7e-29 131.7 186 46.2
TAR628G0194 Trochodendron aralioides HOM05D007198 ORTHO05D008969 8.0e-29 131.0 189 42.3
EL10Ac6g15754 Beta vulgaris HOM05D007198 ORTHO05D008969 1.4e-28 130.2 174 44.3
Atru.BG.94.p Acer truncatum HOM05D007198 ORTHO05D008969 2.3e-28 129.4 161 44.7
COL.COLO4_11404 Corchorus olitorius HOM05D007198 ORTHO05D008969 2.3e-28 129.4 184 41.8
Medtr5g017490 Medicago truncatula HOM05D007198 ORTHO05D008969 2.3e-28 129.4 184 43.5
Gohir.A12G069000 Gossypium hirsutum HOM05D007198 ORTHO05D008969 3.0e-28 129.0 172 42.4
MD10G1272600 Malus domestica HOM05D007198 ORTHO05D008969 4.0e-28 128.6 119 53.8
CARHR245490 Cardamine hirsuta HOM05D007198 ORTHO05D008969 5.2e-28 128.3 184 44.6
Aqoxy6G01332 Aquilegia oxysepala HOM05D007198 ORTHO05D008969 1.2e-27 127.1 182 43.4
BraA08t34210Z Brassica rapa HOM05D007198 ORTHO05D008969 1.2e-27 127.1 170 44.1
Ciclev10026429m.g Citrus clementina HOM05D007198 ORTHO05D008969 1.5e-27 126.7 174 42.5
MBI02_g02990_MAGBIO Magnolia biondii HOM05D007198 ORTHO05D008969 1.5e-27 126.7 102 56.9
BolC3t20215H Brassica oleracea HOM05D007198 ORTHO05D008969 2.0e-27 126.3 109 56.9
MD14G1074900 Malus domestica HOM05D007198 ORTHO05D008969 2.6e-27 125.9 121 52.1
AL7G13790 Arabidopsis lyrata HOM05D007198 ORTHO05D008969 3.4e-27 125.6 185 43.2
Psat2g167000 Pisum sativum HOM05D007198 ORTHO05D008969 5.7e-27 124.8 103 61.2
Cpa.g.sc55.159 Carica papaya HOM05D007198 ORTHO05D008969 7.5e-27 124.4 104 57.7
Sp7g34740 Schrenkiella parvula HOM05D007198 ORTHO05D008969 9.8e-27 124.0 185 44.9
Carub.0007s0322 Capsella rubella HOM05D007198 ORTHO05D008969 1.3e-26 123.6 185 42.2
Thhalv10026229m.g Eutrema salsugineum HOM05D007198 ORTHO05D008969 1.3e-26 123.6 187 44.9
ATR0753G086 Amborella trichopoda HOM05D007198 ORTHO05D008969 1.7e-26 123.2 197 38.6
Lalb_Chr09g0323151 Lupinus albus HOM05D007198 ORTHO05D008969 2.8e-26 122.5 161 44.7
MELO3C007557.2 Cucumis melo HOM05D007198 ORTHO05D008969 3.7e-26 122.1 114 54.4
BcaB03g12356 Brassica carinata HOM05D007198 ORTHO05D008969 4.8e-26 121.7 186 43.5
AT4G37020 Arabidopsis thaliana HOM05D007198 ORTHO05D008969 6.3e-26 121.3 186 43.5
Os10g0388900 Oryza sativa ssp. japonica HOM05D007198 ORTHO05D008969 6.3e-26 121.3 185 44.3
arahy.Tifrunner.gnm1.ann1.VZ1EEZ Arachis hypogaea HOM05D007198 ORTHO05D008969 1.1e-25 120.6 168 44.0
Actinidia03790 Actinidia chinensis HOM05D007198 ORTHO05D008969 4.1e-25 118.6 97 57.7
Nitab4.5_0002016g0040 Nicotiana tabacum HOM05D007198 ORTHO05D008969 4.1e-25 118.6 166 43.4
arahy.Tifrunner.gnm1.ann1.ETA9G6 Arachis hypogaea HOM05D007198 ORTHO05D008969 7.0e-25 117.9 189 42.3
CDE04G0918 Ceratophyllum demersum HOM05D007198 ORTHO05D008969 2.0e-24 116.3 182 42.3
Zm00001eb223810 Zea mays HOM05D007198 ORTHO05D008969 2.0e-24 116.3 174 40.2
Thecc.01G054900 Theobroma cacao HOM05D007198 ORTHO05D008969 1.3e-23 113.6 174 40.8
Oeu024300.1 Olea europaea HOM05D007198 ORTHO05D008969 2.9e-23 112.5 78 65.4
Potri.007G043200 Populus trichocarpa HOM05D007198 ORTHO05D008969 2.9e-23 112.5 196 38.3
SEGI_34131 Sequoiadendron giganteum HOM05D007198 ORTHO05D008969 2.9e-23 112.5 114 47.4
Sabra07G0038100 Salix brachista HOM05D007198 ORTHO05D008969 5.0e-23 111.7 195 39.5
Ca_24774_v3 Cicer arietinum L. HOM05D007198 ORTHO05D008969 6.5e-23 111.3 174 40.8
Aa31LG6G13950 Aethionema arabicum HOM05D007198 ORTHO05D008969 2.5e-22 109.4 210 38.6
FAN23G1494 Fragaria x ananassa HOM05D007198 ORTHO05D008969 1.6e-21 106.7 180 41.1
PGSC0003DMG402015781 Solanum tuberosum HOM05D007198 ORTHO05D008969 2.8e-21 105.9 71 69.0
Glyma.11G056400 Glycine max HOM05D007198 ORTHO05D008969 3.7e-18 95.5 135 45.9
Hund16328 Selenicereus undatus HOM05D007198 ORTHO05D008969 9.2e-17 90.9 155 37.4
Ah.03g144890 Amaranthus hybridus HOM05D007198 ORTHO05D008969 2.7e-16 89.4 78 59.0
Pp3c12_24960 Physcomitrium patens HOM05D007198 ORTHO05D008969 1.5e-14 83.6 121 41.3
Mapoly0001s0095 Marchantia polymorpha HOM05D007198 ORTHO05D008969 6.8e-12 74.7 178 29.8
SMO146G0205 Selaginella moellendorffii HOM05D007198 ORTHO05D008969 2.2e-10 69.7 101 42.6
CBR_g37151 Chara braunii HOM05D007198 ORTHO05D008969 2.9e-10 69.3 118 35.6
MD17G1282900 Malus domestica HOM05D007198 ORTHO05D008969 1.8e-09 66.6 57 54.4


User provided reference genes

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