Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14612 Utricularia gibba HOM05D006367 ORTHO05D007942 2.4e-133 478.8 236 100.0
Oeu028362.1 Olea europaea HOM05D006367 ORTHO05D007942 2.4e-96 355.9 234 73.1
MSTRG.23307 Avicennia marina HOM05D006367 ORTHO05D007942 4.0e-96 355.1 235 74.5
SalBow6G4439 Salvia bowleyana HOM05D006367 ORTHO05D007942 5.5e-93 344.7 235 70.6
Potri.005G085800 Populus trichocarpa HOM05D006367 ORTHO05D007942 2.7e-92 342.4 234 70.9
QL06p031689 Quercus lobata HOM05D006367 ORTHO05D007942 3.9e-91 338.6 236 70.3
Migut.H02447 Erythranthe guttata HOM05D006367 ORTHO05D007942 9.6e-90 334.0 235 68.1
Manes.12G144300 Manihot esculenta HOM05D006367 ORTHO05D007942 1.6e-89 333.2 234 67.5
Dinv42673 Davidia involucrata HOM05D006367 ORTHO05D007942 2.8e-89 332.4 235 68.1
Eucgr.I00312 Eucalyptus grandis HOM05D006367 ORTHO05D007942 8.2e-89 330.9 235 66.8
Sabra05G0070700 Salix brachista HOM05D006367 ORTHO05D007942 8.2e-89 330.9 234 69.7
Cc04_g11230 Coffea canephora HOM05D006367 ORTHO05D007942 1.4e-88 330.1 235 67.2
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 1.8e-88 329.7 237 67.1
RcHm_v2.0_Chr2g0117401 Rosa chinensis HOM05D006367 ORTHO05D007942 6.9e-88 327.8 235 67.2
Thecc.01G115500 Theobroma cacao HOM05D006367 ORTHO05D007942 9.0e-88 327.4 235 66.0
CiPaw.04G090000 Carya illinoinensis HOM05D006367 ORTHO05D007942 1.2e-87 327.0 235 68.5
COL.COLO4_10985 Corchorus olitorius HOM05D006367 ORTHO05D007942 1.5e-87 326.6 235 67.2
Prupe.6G168900 Prunus persica HOM05D006367 ORTHO05D007942 3.4e-87 325.5 234 67.5
Gohir.A02G136100 Gossypium hirsutum HOM05D006367 ORTHO05D007942 5.8e-87 324.7 235 66.8
RcHm_v2.0_Chr2g0117461 Rosa chinensis HOM05D006367 ORTHO05D007942 5.8e-87 324.7 235 67.2
Cc07_g16470 Coffea canephora HOM05D006367 ORTHO05D007942 7.6e-87 324.3 235 67.7
Nn5g28853 Nelumbo nucifera HOM05D006367 ORTHO05D007942 7.6e-87 324.3 236 65.7
FAN26G2292 Fragaria x ananassa HOM05D006367 ORTHO05D007942 1.0e-86 323.9 235 67.7
FAN23G0352 Fragaria x ananassa HOM05D006367 ORTHO05D007942 1.3e-86 323.6 235 68.1
Atru.chr7.1822 Acer truncatum HOM05D006367 ORTHO05D007942 3.8e-86 322.0 236 66.5
Duzib187G0980 Durio zibethinus HOM05D006367 ORTHO05D007942 5.0e-86 321.6 235 66.0
FAN19G1918 Fragaria x ananassa HOM05D006367 ORTHO05D007942 8.4e-86 320.9 235 67.2
Ciclev10025312m.g Citrus clementina HOM05D006367 ORTHO05D007942 1.4e-85 320.1 235 65.1
Nitab4.5_0009050g0050 Nicotiana tabacum HOM05D006367 ORTHO05D007942 1.4e-85 320.1 235 66.4
Sopen04g022980 Solanum pennellii HOM05D006367 ORTHO05D007942 1.4e-85 320.1 235 66.8
TAR625G1249 Trochodendron aralioides HOM05D006367 ORTHO05D007942 1.4e-85 320.1 235 65.5
Solyc04g051610.3 Solanum lycopersicum HOM05D006367 ORTHO05D007942 1.9e-85 319.7 235 66.8
Gorai.003G048000 Gossypium raimondii HOM05D006367 ORTHO05D007942 2.5e-85 319.3 235 65.5
SGA_v2.0_scaffold2G01287 Striga asiatica HOM05D006367 ORTHO05D007942 2.5e-85 319.3 242 64.5
arahy.Tifrunner.gnm1.ann1.511U58 Arachis hypogaea HOM05D006367 ORTHO05D007942 3.2e-85 318.9 235 66.8
MD10G1028700 Malus domestica HOM05D006367 ORTHO05D007942 9.3e-85 317.4 235 65.1
Hma1.2p1_0696F.1_g204660 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 2.1e-84 316.2 230 66.5
arahy.Tifrunner.gnm1.ann1.GSD986 Arachis hypogaea HOM05D006367 ORTHO05D007942 4.6e-84 315.1 235 66.0
ECA240G4594 Erigeron canadensis HOM05D006367 ORTHO05D007942 6.1e-84 314.7 233 64.8
Nitab4.5_0000184g0160 Nicotiana tabacum HOM05D006367 ORTHO05D007942 7.9e-84 314.3 231 66.7
Haze_25063 Corylus avellana HOM05D006367 ORTHO05D007942 1.0e-83 313.9 235 66.4
Aqoxy6G00434 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 1.3e-83 313.5 235 63.4
Ah.15g092040 Amaranthus hybridus HOM05D006367 ORTHO05D007942 1.8e-83 313.2 234 66.2
Cfa002770 Carpinus fangiana HOM05D006367 ORTHO05D007942 1.8e-83 313.2 235 66.0
CANSAT21G2601 Cannabis sativa HOM05D006367 ORTHO05D007942 3.9e-83 312.0 235 65.5
PSO675G5206 Papaver somniferum HOM05D006367 ORTHO05D007942 5.1e-83 311.6 236 65.7
PGR004G1961 Punica granatum HOM05D006367 ORTHO05D007942 6.7e-83 311.2 235 64.7
Hund02300 Selenicereus undatus HOM05D006367 ORTHO05D007942 6.7e-83 311.2 235 65.1
THA.LOC104807726 Tarenaya hassleriana HOM05D006367 ORTHO05D007942 1.5e-82 310.1 234 63.7
TWI75G1400 Tripterygium wilfordii HOM05D006367 ORTHO05D007942 1.5e-82 310.1 236 64.0
VMungo0251G2542 Vigna mungo HOM05D006367 ORTHO05D007942 1.5e-82 310.1 235 66.0
HanXRQChr03g0078741 Helianthus annuus HOM05D006367 ORTHO05D007942 2.5e-82 309.3 233 62.7
EL10Ac7g17324 Beta vulgaris HOM05D006367 ORTHO05D007942 7.4e-82 307.8 236 62.7
AUR62040525 Chenopodium quinoa HOM05D006367 ORTHO05D007942 7.4e-82 307.8 235 64.3
PGSC0003DMG400023291 Solanum tuberosum HOM05D006367 ORTHO05D007942 7.4e-82 307.8 235 64.7
AUR62039784 Chenopodium quinoa HOM05D006367 ORTHO05D007942 9.7e-82 307.4 235 65.1
Thhalv10000126m.g Eutrema salsugineum HOM05D006367 ORTHO05D007942 9.7e-82 307.4 234 64.1
BcaC02g08760 Brassica carinata HOM05D006367 ORTHO05D007942 3.7e-81 305.4 234 63.7
C04p50960 Brassica napus HOM05D006367 ORTHO05D007942 3.7e-81 305.4 234 63.7
MBI04_g33338_MAGBIO Magnolia biondii HOM05D006367 ORTHO05D007942 3.7e-81 305.4 235 61.7
AT2G21860 Arabidopsis thaliana HOM05D006367 ORTHO05D007942 6.3e-81 304.7 234 65.0
BcaB06g27790 Brassica carinata HOM05D006367 ORTHO05D007942 8.2e-81 304.3 234 63.7
Sp4g00950 Schrenkiella parvula HOM05D006367 ORTHO05D007942 8.2e-81 304.3 234 64.1
Carub.0004s0089 Capsella rubella HOM05D006367 ORTHO05D007942 1.1e-80 303.9 234 64.1
CSS0012231 Camellia sinensis var. sinensis HOM05D006367 ORTHO05D007942 1.8e-80 303.1 219 67.1
Lsat_1_v5_gn_5_44981 Lactuca sativa HOM05D006367 ORTHO05D007942 3.1e-80 302.4 233 61.4
A04p16450 Brassica napus HOM05D006367 ORTHO05D007942 5.3e-80 301.6 234 62.8
BraA04t17280Z Brassica rapa HOM05D006367 ORTHO05D007942 5.3e-80 301.6 234 62.8
Sc14g0009250 Simmondsia chinensis HOM05D006367 ORTHO05D007942 5.3e-80 301.6 235 62.1
Zm00001eb361490 Zea mays HOM05D006367 ORTHO05D007942 5.3e-80 301.6 234 62.0
Os01g0716400 Oryza sativa ssp. japonica HOM05D006367 ORTHO05D007942 6.9e-80 301.2 234 62.0
Psat7g050440 Pisum sativum HOM05D006367 ORTHO05D007942 1.5e-79 300.1 235 62.6
RcHm_v2.0_Chr2g0117441 Rosa chinensis HOM05D006367 ORTHO05D007942 2.0e-79 299.7 219 66.7
AL4G11170 Arabidopsis lyrata HOM05D006367 ORTHO05D007942 3.4e-79 298.9 234 63.7
CARHR112860 Cardamine hirsuta HOM05D006367 ORTHO05D007942 5.9e-79 298.1 234 62.8
MELO3C034581.2 Cucumis melo HOM05D006367 ORTHO05D007942 2.9e-78 295.8 235 61.3
CDE06G2209 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 3.8e-78 295.4 235 59.1
Lalb_Chr07g0184731 Lupinus albus HOM05D006367 ORTHO05D007942 8.5e-78 294.3 235 63.8
Aa31LG7G14760 Aethionema arabicum HOM05D006367 ORTHO05D007942 5.5e-77 291.6 234 60.3
FvH4_1g22940 Fragaria vesca HOM05D006367 ORTHO05D007942 7.2e-77 291.2 219 66.2
Lj4g0025161 Lotus japonicus HOM05D006367 ORTHO05D007942 5.1e-75 285.0 235 61.3
Glyma.05G184900 Glycine max HOM05D006367 ORTHO05D007942 3.3e-74 282.3 235 61.3
Gohir.D03G046900 Gossypium hirsutum HOM05D006367 ORTHO05D007942 6.3e-73 278.1 201 66.2
Phvul.002G265800 Phaseolus vulgaris HOM05D006367 ORTHO05D007942 8.2e-73 277.7 235 60.9
Peaxi162Scf00106g01216 Petunia axillaris HOM05D006367 ORTHO05D007942 1.1e-72 277.3 213 63.4
ClCG02G000950 Citrullus lanatus HOM05D006367 ORTHO05D007942 2.4e-72 276.2 235 57.9
Sed0027379 Sechium edule HOM05D006367 ORTHO05D007942 3.1e-72 275.8 220 61.4
CARHR112850 Cardamine hirsuta HOM05D006367 ORTHO05D007942 6.9e-72 274.6 234 60.7
Ca_17687_v3 Cicer arietinum L. HOM05D006367 ORTHO05D007942 9.1e-72 274.2 235 58.3
MELO3C020965.2 Cucumis melo HOM05D006367 ORTHO05D007942 9.1e-72 274.2 235 58.7
TPR.G2178 Trifolium pratense HOM05D006367 ORTHO05D007942 3.4e-71 272.3 235 57.9
CsaV3_2G017740 Cucumis sativus L. HOM05D006367 ORTHO05D007942 4.5e-71 271.9 235 57.9
CDE04G0187 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 1.7e-70 270.0 235 54.0
CAN.G1044.2 Capsicum annuum HOM05D006367 ORTHO05D007942 3.8e-70 268.9 201 67.2
ATR1120G154 Amborella trichopoda HOM05D006367 ORTHO05D007942 6.5e-70 268.1 237 55.3
Medtr8g092050 Medicago truncatula HOM05D006367 ORTHO05D007942 6.5e-70 268.1 236 58.9
Eucgr.L02754 Eucalyptus grandis HOM05D006367 ORTHO05D007942 1.1e-69 267.3 182 68.7
Lj4P863T60 Lonicera japonica HOM05D006367 ORTHO05D007942 4.7e-68 261.9 219 60.7
DCAR_011462 Daucus carota HOM05D006367 ORTHO05D007942 3.9e-67 258.8 236 56.4
Actinidia05379 Actinidia chinensis HOM05D006367 ORTHO05D007942 2.3e-59 233.0 219 53.9
Hma1.2p1_0696F.1_g204650 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 5.2e-59 231.9 179 63.1
SMO367G0721 Selaginella moellendorffii HOM05D006367 ORTHO05D007942 6.5e-54 214.9 233 45.9
Glyma.08G142900 Glycine max HOM05D006367 ORTHO05D007942 5.5e-53 211.8 198 57.1
HPP92_027992 Vanilla planifolia HOM05D006367 ORTHO05D007942 2.1e-52 209.9 191 54.5
AagrBONN_evm.TU.Sc2ySwM_344.2769 Anthoceros agrestis HOM05D006367 ORTHO05D007942 9.8e-50 201.1 234 46.2
Nitab4.5_0005102g0010 Nicotiana tabacum HOM05D006367 ORTHO05D007942 1.7e-49 200.3 231 48.1
Pp3c8_810 Physcomitrium patens HOM05D006367 ORTHO05D007942 1.8e-48 196.8 235 43.0
CBR_g8843 Chara braunii HOM05D006367 ORTHO05D007942 1.3e-41 174.1 295 33.9
AagrBONN_evm.TU.Sc2ySwM_344.1355 Anthoceros agrestis HOM05D006367 ORTHO05D007942 2.6e-34 149.8 229 36.2
Cre09.g388060 Chlamydomonas reinhardtii HOM05D006367 ORTHO05D007942 7.8e-31 138.3 252 34.9
PGSC0003DMG400020963 Solanum tuberosum HOM05D006367 ORTHO05D007942 4.3e-29 132.5 138 51.4
MCO11G553 Micromonas commoda HOM05D006367 ORTHO05D007942 3.0e-22 109.8 234 30.8
GSVIVG01022252001 Vitis vinifera HOM05D006367 ORTHO05D007942 2.5e-21 106.7 93 54.8
PGSC0003DMG400004546 Solanum tuberosum HOM05D006367 ORTHO05D007942 8.1e-20 101.7 177 35.6
PRCOL_00006729 Prasinoderma coloniale HOM05D006367 ORTHO05D007942 2.6e-18 96.7 117 38.5
CARHR293120 Cardamine hirsuta HOM05D006367 ORTHO05D007942 3.3e-13 79.7 90 47.8
Haze_24492 Corylus avellana HOM05D001078 ORTHO05D000927 2.3e-11 73.6 52 71.2
vmacro12891 Vaccinium macrocarpon HOM05D006367 ORTHO05D007942 6.0e-07 58.9 60 50.0
RcHm_v2.0_Chr3g0448661 Rosa chinensis HOM05D006573 ORTHO05D008073 6.6e-06 55.5 164 20.1


User provided reference genes

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