Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14551 Utricularia gibba HOM05D005154 ORTHO05D006270 2.7e-164 582.0 310 100.0
MSTRG.2575 Avicennia marina HOM05D005154 ORTHO05D006270 1.4e-59 234.2 323 48.0
SalBow3G4482 Salvia bowleyana HOM05D005154 ORTHO05D006270 1.4e-59 234.2 321 49.5
SalBow3G3886 Salvia bowleyana HOM05D005154 ORTHO05D006270 3.0e-59 233.0 321 49.2
Migut.H02344 Erythranthe guttata HOM05D005154 ORTHO05D006270 3.1e-56 223.0 238 57.6
MSTRG.3768 Avicennia marina HOM05D005154 ORTHO05D006270 2.7e-55 219.9 275 51.6
SalBow5G0552 Salvia bowleyana HOM05D005154 ORTHO05D006270 1.3e-54 217.6 309 46.6
SGA_v2.0_scaffold111G31501 Striga asiatica HOM05D005154 ORTHO05D006270 1.9e-53 213.8 253 52.6
Migut.L00147 Erythranthe guttata HOM05D005154 ORTHO05D006270 1.1e-48 198.0 229 54.6
CSS0008069 Camellia sinensis var. sinensis HOM05D005154 ORTHO05D006270 1.2e-44 184.5 253 48.6
Cc07_g14830 Coffea canephora HOM05D005154 ORTHO05D006270 2.8e-44 183.3 248 49.6
SGA_v2.0_scaffold335G49113 Striga asiatica HOM05D005154 ORTHO05D006270 3.6e-44 183.0 225 52.0
Sopen11g004840 Solanum pennellii HOM05D005154 ORTHO05D006270 1.4e-43 181.0 239 48.5
PGSC0003DMG400016159 Solanum tuberosum HOM05D005154 ORTHO05D006270 2.3e-43 180.3 239 49.0
Dinv13215 Davidia involucrata HOM05D005154 ORTHO05D006270 3.1e-43 179.9 242 50.4
PGR004G1180 Punica granatum HOM05D005154 ORTHO05D006270 5.2e-43 179.1 254 49.2
Peaxi162Scf00381g00914 Petunia axillaris HOM05D005154 ORTHO05D006270 6.8e-43 178.7 324 41.0
Eucgr.I00513 Eucalyptus grandis HOM05D005154 ORTHO05D006270 8.9e-43 178.3 206 55.3
CAN.G905.36 Capsicum annuum HOM05D005154 ORTHO05D006270 1.5e-42 177.6 264 45.1
COL.COLO4_27276 Corchorus olitorius HOM05D005154 ORTHO05D006270 2.0e-42 177.2 253 50.2
Oeu032406.1 Olea europaea HOM05D005154 ORTHO05D006270 3.4e-42 176.4 254 45.7
Potri.005G073500 Populus trichocarpa HOM05D005154 ORTHO05D006270 5.8e-42 175.6 244 46.3
TWI53G2081 Tripterygium wilfordii HOM05D005154 ORTHO05D006270 5.8e-42 175.6 214 50.9
TWI77G0548 Tripterygium wilfordii HOM05D005154 ORTHO05D006270 9.8e-42 174.9 213 51.6
Oeu001799.2 Olea europaea HOM05D005154 ORTHO05D006270 1.7e-41 174.1 373 38.3
Solyc11g009070.2 Solanum lycopersicum HOM05D005154 ORTHO05D006270 2.2e-41 173.7 238 47.5
Nitab4.5_0004570g0010 Nicotiana tabacum HOM05D005154 ORTHO05D006270 3.7e-41 172.9 245 48.2
Thecc.01G097800 Theobroma cacao HOM05D005154 ORTHO05D006270 3.7e-41 172.9 256 48.0
Actinidia28853 Actinidia chinensis HOM05D005154 ORTHO05D006270 6.4e-41 172.2 251 47.0
Manes.12G131800 Manihot esculenta HOM05D005154 ORTHO05D006270 1.9e-40 170.6 207 52.7
Potri.007G095600 Populus trichocarpa HOM05D005154 ORTHO05D006270 4.1e-40 169.5 215 49.8
vmacro18586 Vaccinium macrocarpon HOM05D005154 ORTHO05D006270 5.4e-40 169.1 240 47.9
Duzib147G1408 Durio zibethinus HOM05D005154 ORTHO05D006270 9.2e-40 168.3 256 46.9
Sabra07G0078700 Salix brachista HOM05D005154 ORTHO05D006270 9.2e-40 168.3 215 49.8
Actinidia20002 Actinidia chinensis HOM05D005154 ORTHO05D006270 1.2e-39 167.9 193 53.4
Carub.0008s2612 Capsella rubella HOM05D005154 ORTHO05D006270 1.2e-39 167.9 236 47.9
Gohir.A02G128100 Gossypium hirsutum HOM05D005154 ORTHO05D006270 2.1e-39 167.2 238 47.9
MD00G1037300 Malus domestica HOM05D005154 ORTHO05D006270 2.1e-39 167.2 226 49.1
QL06p048470 Quercus lobata HOM05D005154 ORTHO05D006270 6.0e-39 165.6 203 53.2
Sabra05G0060000 Salix brachista HOM05D005154 ORTHO05D006270 6.0e-39 165.6 240 45.4
Gorai.003G040700 Gossypium raimondii HOM05D005154 ORTHO05D006270 7.8e-39 165.2 238 47.1
RcHm_v2.0_Chr2g0112751 Rosa chinensis HOM05D005154 ORTHO05D006270 7.8e-39 165.2 224 48.7
AL8G42810 Arabidopsis lyrata HOM05D005154 ORTHO05D006270 1.0e-38 164.9 220 49.5
Ciclev10026087m.g Citrus clementina HOM05D005154 ORTHO05D006270 1.0e-38 164.9 245 45.3
Duzib187G0267 Durio zibethinus HOM05D005154 ORTHO05D006270 1.3e-38 164.5 226 49.1
HanXRQChr14g0445521 Helianthus annuus HOM05D005154 ORTHO05D006270 1.3e-38 164.5 200 50.5
Sp2g28350 Schrenkiella parvula HOM05D005154 ORTHO05D006270 1.3e-38 164.5 219 47.5
CARHR279200 Cardamine hirsuta HOM05D005154 ORTHO05D006270 2.3e-38 163.7 244 45.1
Cfa002623 Carpinus fangiana HOM05D005154 ORTHO05D006270 3.0e-38 163.3 192 54.7
Lsat_1_v5_gn_2_66460 Lactuca sativa HOM05D005154 ORTHO05D006270 3.9e-38 162.9 197 49.7
Hma1.2p1_0019F.1_g013610 Hydrangea macrophylla HOM05D005154 ORTHO05D006270 5.0e-38 162.5 239 48.5
Rhsim08G0012700 Rhododendron simsii HOM05D005154 ORTHO05D006270 6.6e-38 162.2 239 46.9
FAN19G2087 Fragaria x ananassa HOM05D005154 ORTHO05D006270 8.6e-38 161.8 190 52.1
Ca_17754_v3 Cicer arietinum L. HOM05D005154 ORTHO05D006270 1.5e-37 161.0 193 52.8
Haze_24872 Corylus avellana HOM05D005154 ORTHO05D006270 1.5e-37 161.0 192 53.6
Haze_24881 Corylus avellana HOM05D005154 ORTHO05D006270 1.5e-37 161.0 192 53.6
Cpa.g.sc55.88 Carica papaya HOM05D005154 ORTHO05D006270 1.9e-37 160.6 147 61.2
Nn5g28615 Nelumbo nucifera HOM05D005154 ORTHO05D006270 2.5e-37 160.2 222 48.2
TAR633G1456 Trochodendron aralioides HOM05D005154 ORTHO05D006270 2.5e-37 160.2 193 54.9
Thhalv10004756m.g Eutrema salsugineum HOM05D005154 ORTHO05D006270 3.3e-37 159.8 214 47.2
Gohir.D03G039500 Gossypium hirsutum HOM05D005154 ORTHO05D006270 3.3e-37 159.8 188 52.7
VMungo0251G0355 Vigna mungo HOM05D005154 ORTHO05D006270 3.3e-37 159.8 201 51.2
FAN28G0994 Fragaria x ananassa HOM05D005154 ORTHO05D006270 4.3e-37 159.5 201 50.2
Glyma.05G176600 Glycine max HOM05D005154 ORTHO05D006270 5.6e-37 159.1 191 52.4
A06p32100 Brassica napus HOM05D005154 ORTHO05D006270 9.5e-37 158.3 243 43.6
BolC2t12462H Brassica oleracea HOM05D005154 ORTHO05D006270 9.5e-37 158.3 227 46.3
BraA06t26139Z Brassica rapa HOM05D005154 ORTHO05D006270 9.5e-37 158.3 243 43.6
Atru.chr3.1372 Acer truncatum HOM05D005154 ORTHO05D006270 1.2e-36 157.9 239 44.4
A02p43800 Brassica napus HOM05D005154 ORTHO05D006270 1.2e-36 157.9 233 47.2
BolC3t18339H Brassica oleracea HOM05D002046 ORTHO05D002180 2.1e-36 157.1 206 48.1
BraA02t09304Z Brassica rapa HOM05D005154 ORTHO05D006270 3.6e-36 156.4 233 46.8
CiPaw.03G144000 Carya illinoinensis HOM05D005154 ORTHO05D006270 3.6e-36 156.4 194 54.1
FvH4_1g20490 Fragaria vesca HOM05D005154 ORTHO05D006270 3.6e-36 156.4 190 51.6
FAN23G2516 Fragaria x ananassa HOM05D005154 ORTHO05D006270 3.6e-36 156.4 190 51.6
BcaC01g02761 Brassica carinata HOM05D005154 ORTHO05D006270 4.7e-36 156.0 206 47.6
THA.LOC104807680 Tarenaya hassleriana HOM05D005154 ORTHO05D006270 6.2e-36 155.6 199 49.7
Aa31LG1G16710 Aethionema arabicum HOM05D005154 ORTHO05D006270 8.1e-36 155.2 205 50.2
ECA238G2162 Erigeron canadensis HOM05D005154 ORTHO05D001925 8.1e-36 155.2 164 54.3
Nn1g06223 Nelumbo nucifera HOM05D005154 ORTHO05D006270 1.1e-35 154.8 285 41.4
THA.LOC104798878 Tarenaya hassleriana HOM05D005154 ORTHO05D006270 1.4e-35 154.5 202 49.0
TPR.G6195 Trifolium pratense HOM05D005154 ORTHO05D006270 1.4e-35 154.5 192 52.1
Lj4g0010322 Lotus japonicus HOM05D005154 ORTHO05D006270 1.8e-35 154.1 206 47.6
Phvul.002G257700 Phaseolus vulgaris HOM05D005154 ORTHO05D006270 1.8e-35 154.1 193 50.8
C03p60830 Brassica napus HOM05D005154 ORTHO05D006270 2.3e-35 153.7 206 47.6
Lalb_Chr07g0185271 Lupinus albus HOM05D005154 ORTHO05D006270 2.3e-35 153.7 234 46.2
Medtr8g089995 Medicago truncatula HOM05D005154 ORTHO05D006270 2.3e-35 153.7 193 50.3
Hund13599 Selenicereus undatus HOM05D005154 ORTHO05D006270 2.3e-35 153.7 250 42.4
TAR362G0353 Trochodendron aralioides HOM05D005154 ORTHO05D006270 3.1e-35 153.3 195 51.3
Sed0021389 Sechium edule HOM05D005154 ORTHO05D006270 4.0e-35 152.9 189 51.3
arahy.Tifrunner.gnm1.ann1.LGH16T Arachis hypogaea HOM05D005154 ORTHO05D006270 2.0e-34 150.6 245 45.3
unitig_748.g8652 Utricularia gibba HOM05D005154 ORTHO05D006270 2.0e-34 150.6 187 51.3
Sed0002157 Sechium edule HOM05D005154 ORTHO05D006270 9.9e-34 148.3 184 53.8
Prupe.6G191100 Prunus persica HOM05D005154 ORTHO05D006270 1.3e-33 147.9 166 56.0
EL10Ac6g15137 Beta vulgaris HOM05D005154 ORTHO05D006270 1.7e-33 147.5 246 41.9
arahy.Tifrunner.gnm1.ann1.0B7H6P Arachis hypogaea HOM05D005154 ORTHO05D006270 2.2e-33 147.1 211 47.9
CsaV3_6G045320 Cucumis sativus L. HOM05D005154 ORTHO05D006270 2.9e-33 146.7 188 48.9
MELO3C007745.2 Cucumis melo HOM05D005154 ORTHO05D006270 3.7e-33 146.4 188 48.9
AUR62001985 Chenopodium quinoa HOM05D005154 ORTHO05D006270 6.4e-33 145.6 268 39.9
MBI02_g02178_MAGBIO Magnolia biondii HOM05D005154 ORTHO05D006270 8.3e-33 145.2 191 49.2
Os08g0484800 Oryza sativa ssp. japonica HOM05D005154 ORTHO05D006270 1.1e-32 144.8 207 45.9
C02p63960 Brassica napus HOM05D005154 ORTHO05D006270 2.4e-32 143.7 240 43.3
MELO3C017601.2 Cucumis melo HOM05D005154 ORTHO05D006270 2.4e-32 143.7 178 50.0
ATR1133G017 Amborella trichopoda HOM05D005154 ORTHO05D006270 4.1e-32 142.9 142 57.7
ClCG07G017400 Citrullus lanatus HOM05D005154 ORTHO05D006270 4.1e-32 142.9 189 50.8
AT5G65250 Arabidopsis thaliana HOM05D005154 ORTHO05D006270 1.6e-31 141.0 213 45.1
PSO210G3532 Papaver somniferum HOM05D005154 ORTHO05D006270 6.0e-31 139.0 211 48.8
PSO447G0271 Papaver somniferum HOM05D005154 ORTHO05D006270 6.0e-31 139.0 194 50.0
CDE05G0874 Ceratophyllum demersum HOM05D005154 ORTHO05D006270 3.9e-30 136.3 188 48.9
PGR102G1872 Punica granatum HOM05D005154 ORTHO05D006270 6.6e-30 135.6 111 67.6
Ca_16517_v3 Cicer arietinum L. HOM05D005154 ORTHO05D006270 9.5e-29 131.7 201 45.8
BcaB07g34227 Brassica carinata HOM05D005154 ORTHO05D006270 1.2e-28 131.3 134 57.5
Medtr3g086990 Medicago truncatula HOM05D005154 ORTHO05D006270 1.6e-28 131.0 198 46.5
Glyma.08G134000 Glycine max HOM05D005154 ORTHO05D006270 2.1e-28 130.6 182 47.8
Psat7g056800 Pisum sativum HOM05D005154 ORTHO05D006270 2.8e-28 130.2 152 53.3
HPP92_016780 Vanilla planifolia HOM05D005154 ORTHO05D006270 3.6e-28 129.8 130 57.7
AUR62003820 Chenopodium quinoa HOM05D005154 ORTHO05D006270 1.4e-27 127.9 111 60.4
Sc03g0000070 Simmondsia chinensis HOM05D005154 ORTHO05D006270 2.4e-27 127.1 200 44.5
Aqoxy6G00745 Aquilegia oxysepala HOM05D005154 ORTHO05D006270 3.1e-27 126.7 224 42.9
SEGI_40329 Sequoiadendron giganteum HOM05D005154 ORTHO05D006270 3.1e-27 126.7 191 43.5
Lj4A897G79 Lonicera japonica HOM05D005154 ORTHO05D006270 1.5e-26 124.4 161 47.2
GSVIVG01006633001 Vitis vinifera HOM05D005154 ORTHO05D006270 1.5e-26 124.4 147 50.3
CsaV3_UNG158170 Cucumis sativus L. HOM05D001364 ORTHO05D006270 1.3e-25 121.3 169 47.9
DCAR_014210 Daucus carota HOM05D005154 ORTHO05D006270 2.2e-25 120.6 156 46.8
MBI02_g27971_MAGBIO Magnolia biondii HOM05D005154 ORTHO05D006270 3.8e-25 119.8 169 48.5
Sed0027637 Sechium edule HOM05D005154 ORTHO05D006270 3.8e-25 119.8 262 37.0
BcaNung07054 Brassica carinata HOM05D005154 ORTHO05D006270 9.2e-24 115.2 95 64.2
ClCG01G018660 Citrullus lanatus HOM05D005154 ORTHO05D006270 1.7e-22 110.9 290 33.1
Psat5g090640 Pisum sativum HOM05D005154 ORTHO05D006270 3.9e-22 109.8 191 42.9
CsaV3_4G004630 Cucumis sativus L. HOM05D005154 ORTHO05D006270 6.9e-19 99.0 98 58.2
Lj2C542T5 Lonicera japonica HOM05D005154 ORTHO05D006270 7.6e-18 95.5 128 46.1
MD01G1033600 Malus domestica HOM05D005154 ORTHO05D006270 3.8e-17 93.2 126 47.6
CDE03G0147 Ceratophyllum demersum HOM05D005154 ORTHO05D006270 1.1e-16 91.7 105 48.6
Mapoly0112s0020 Marchantia polymorpha HOM05D005154 ORTHO05D006270 9.3e-16 88.6 98 50.0
CiPaw.04G102700 Carya illinoinensis HOM05D005154 ORTHO05D006270 2.7e-15 87.0 128 47.7
Pp3c10_24690 Physcomitrium patens HOM05D005154 ORTHO05D006270 2.7e-15 87.0 113 46.0
CDE05G3641 Ceratophyllum demersum HOM05D005154 ORTHO05D006270 3.3e-13 80.1 131 40.5
CBR_g50776 Chara braunii HOM05D002289 ORTHO05D004369 4.3e-13 79.7 113 39.8
CsaV3_UNG129000 Cucumis sativus L. HOM05D005154 ORTHO05D006270 1.3e-12 78.2 81 56.8
AagrBONN_evm.TU.Sc2ySwM_344.1569 Anthoceros agrestis HOM05D005154 ORTHO05D006270 3.6e-12 76.6 106 43.4
Lj2C542T6 Lonicera japonica HOM05D005154 ORTHO05D006270 4.8e-12 76.3 95 52.6
CsaV3_UNG223540 Cucumis sativus L. HOM05D005154 ORTHO05D006270 1.8e-11 74.3 89 53.9
CiPaw.11G071200 Carya illinoinensis HOM05D005154 ORTHO05D006270 3.1e-11 73.6 65 64.6
Nitab4.5_0000743g0090 Nicotiana tabacum HOM05D005154 ORTHO05D006270 2.0e-10 70.9 61 55.7
Actinidia28244 Actinidia chinensis HOM05D005154 ORTHO05D006270 3.4e-10 70.1 59 66.1
SMO171G0129 Selaginella moellendorffii HOM05D005154 ORTHO05D006270 4.5e-10 69.7 159 35.2
CiPaw.02G062100 Carya illinoinensis HOM05D005154 ORTHO05D006270 2.1e-07 60.8 51 68.6
MBI02_g48054_MAGBIO Magnolia biondii HOM05D005154 ORTHO05D006270 3.0e-06 57.0 53 66.0
CDE06G0254 Ceratophyllum demersum HOM05D006096 ORTHO05D007775 3.9e-06 56.6 88 34.1


User provided reference genes

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