Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14550 Utricularia gibba HOM05D006096 ORTHO05D007775 9.9e-239 829.7 416 100.0
Migut.H02345 Erythranthe guttata HOM05D006096 ORTHO05D007775 2.1e-100 370.2 436 51.8
Peaxi162Scf00381g01013 Petunia axillaris HOM05D006096 ORTHO05D007775 2.9e-89 333.2 434 45.9
CSS0046442 Camellia sinensis var. sinensis HOM05D006096 ORTHO05D007775 1.9e-88 330.5 443 46.3
PGSC0003DMG400016160 Solanum tuberosum HOM05D006096 ORTHO05D007775 7.1e-88 328.6 442 44.8
Nn1g05418 Nelumbo nucifera HOM05D006096 ORTHO05D007775 9.3e-88 328.2 441 44.0
RcHm_v2.0_Chr2g0112761 Rosa chinensis HOM05D006096 ORTHO05D007775 1.6e-87 327.4 432 45.4
Cpa.g.sc55.89 Carica papaya HOM05D006096 ORTHO05D007775 2.1e-87 327.0 429 46.2
MBI02_g02177_MAGBIO Magnolia biondii HOM05D006096 ORTHO05D007775 2.7e-87 326.6 441 44.7
Cc07_g14840 Coffea canephora HOM05D006096 ORTHO05D007775 3.5e-87 326.2 448 46.0
vmacro18587 Vaccinium macrocarpon HOM05D006096 ORTHO05D007775 4.6e-87 325.9 432 44.4
Oeu033049.1 Olea europaea HOM05D006096 ORTHO05D007775 7.9e-87 325.1 365 50.1
Sopen11g004830 Solanum pennellii HOM05D006096 ORTHO05D007775 7.9e-87 325.1 451 45.0
Atru.chr3.1373 Acer truncatum HOM05D006096 ORTHO05D007775 1.8e-86 323.9 435 45.3
Eucgr.H04751 Eucalyptus grandis HOM05D006096 ORTHO05D007775 6.7e-86 322.0 429 45.2
EL10Ac6g15136 Beta vulgaris HOM05D006096 ORTHO05D007775 2.5e-85 320.1 472 42.4
TWI53G1189 Tripterygium wilfordii HOM05D006096 ORTHO05D007775 5.7e-85 318.9 449 44.3
COL.COLO4_27275 Corchorus olitorius HOM05D006096 ORTHO05D007775 7.4e-85 318.5 432 46.8
Potri.005G073600 Populus trichocarpa HOM05D006096 ORTHO05D007775 7.4e-85 318.5 430 44.9
Gorai.011G113400 Gossypium raimondii HOM05D006096 ORTHO05D007775 1.3e-84 317.8 432 45.8
SGA_v2.0_scaffold111G31503 Striga asiatica HOM05D006096 ORTHO05D007775 1.3e-84 317.8 428 46.3
Lsat_1_v5_gn_5_34320 Lactuca sativa HOM05D006096 ORTHO05D007775 3.7e-84 316.2 428 45.3
Gohir.A10G085100 Gossypium hirsutum HOM05D006096 ORTHO05D007775 4.8e-84 315.8 432 46.1
Duzib187G1253 Durio zibethinus HOM05D006096 ORTHO05D007775 1.8e-83 313.9 431 45.5
MD01G1033500 Malus domestica HOM05D006096 ORTHO05D007775 2.4e-83 313.5 434 44.9
Phvul.001G253200 Phaseolus vulgaris HOM05D006096 ORTHO05D007775 2.4e-83 313.5 448 42.4
Aqoxy6G00746 Aquilegia oxysepala HOM05D006096 ORTHO05D007775 4.1e-83 312.8 440 44.1
Sc16g0000180 Simmondsia chinensis HOM05D006096 ORTHO05D007775 5.3e-83 312.4 430 43.5
Psat5g090600 Pisum sativum HOM05D006096 ORTHO05D007775 3.4e-82 309.7 447 43.6
FvH4_1g20510 Fragaria vesca HOM05D006096 ORTHO05D007775 4.5e-82 309.3 441 43.3
Glyma.11G241200 Glycine max HOM05D006096 ORTHO05D007775 7.6e-82 308.5 444 43.5
Medtr3g087010 Medicago truncatula HOM05D006096 ORTHO05D007775 1.3e-81 307.8 446 43.7
Prupe.6G191000 Prunus persica HOM05D006096 ORTHO05D007775 1.3e-81 307.8 436 43.3
Lj6g0005810 Lotus japonicus HOM05D006096 ORTHO05D007775 3.8e-81 306.2 449 42.8
TAR625G1553 Trochodendron aralioides HOM05D006096 ORTHO05D007775 5.0e-81 305.8 352 50.3
Sed0027583 Sechium edule HOM05D006096 ORTHO05D007775 8.5e-81 305.1 441 42.2
Glyma.18G015800 Glycine max HOM05D006096 ORTHO05D007775 1.9e-80 303.9 445 43.1
TPR.G15994 Trifolium pratense HOM05D006096 ORTHO05D007775 1.9e-80 303.9 445 43.1
ATR0684G225 Amborella trichopoda HOM05D006096 ORTHO05D007775 3.2e-80 303.1 447 42.5
CAN.G905.37 Capsicum annuum HOM05D006096 ORTHO05D007775 7.2e-80 302.0 349 50.7
Hund13600 Selenicereus undatus HOM05D006096 ORTHO05D007775 1.2e-79 301.2 496 42.1
CANSAT01G2346 Cannabis sativa HOM05D006096 ORTHO05D007775 2.1e-79 300.4 474 41.1
SalBow3G4176 Salvia bowleyana HOM05D006096 ORTHO05D007775 2.3e-78 297.0 462 43.3
arahy.Tifrunner.gnm1.ann1.C4UPUA Arachis hypogaea HOM05D006096 ORTHO05D007775 8.7e-78 295.0 455 41.8
VMungo1383G2853 Vigna mungo HOM05D006096 ORTHO05D007775 8.7e-78 295.0 442 41.2
AUR62001986 Chenopodium quinoa HOM05D006096 ORTHO05D007775 1.1e-77 294.7 489 39.5
Lalb_Chr19g0127391 Lupinus albus HOM05D006096 ORTHO05D007775 1.5e-77 294.3 448 42.2
C09p67070 Brassica napus HOM05D006096 ORTHO05D007775 4.8e-76 289.3 430 42.6
AT5G10320 Arabidopsis thaliana HOM05D006096 ORTHO05D007775 1.4e-75 287.7 444 41.0
BcaC04g19312 Brassica carinata HOM05D006096 ORTHO05D007775 1.8e-75 287.3 435 41.6
AL6G20820 Arabidopsis lyrata HOM05D006096 ORTHO05D007775 2.4e-75 287.0 438 41.3
BraA10t44776Z Brassica rapa HOM05D006096 ORTHO05D007775 2.4e-75 287.0 441 41.5
BolC9t59480H Brassica oleracea HOM05D006096 ORTHO05D007775 4.1e-75 286.2 436 41.1
arahy.Tifrunner.gnm1.ann1.DD3ZZY Arachis hypogaea HOM05D006096 ORTHO05D007775 5.3e-75 285.8 483 40.2
PSO210G0897 Papaver somniferum HOM05D006096 ORTHO05D007775 7.7e-74 282.0 431 41.1
A10p27260 Brassica napus HOM05D006096 ORTHO05D007775 1.0e-73 281.6 319 48.9
Aa31LG3G16830 Aethionema arabicum HOM05D006096 ORTHO05D007775 2.2e-73 280.4 447 40.3
BcaB08g37116 Brassica carinata HOM05D006096 ORTHO05D007775 2.9e-73 280.0 346 46.8
Nitab4.5_0004570g0020 Nicotiana tabacum HOM05D006096 ORTHO05D007775 2.9e-73 280.0 339 47.5
BcaC04g19315 Brassica carinata HOM05D006096 ORTHO05D007775 3.2e-72 276.6 323 47.7
Actinidia28854 Actinidia chinensis HOM05D006096 ORTHO05D007775 4.6e-71 272.7 427 41.2
QL06p048476 Quercus lobata HOM05D006096 ORTHO05D007775 6.1e-71 272.3 351 45.6
ECA246G2908 Erigeron canadensis HOM05D006096 ORTHO05D007775 7.9e-71 271.9 461 40.1
Zm00001eb081250 Zea mays HOM05D006096 ORTHO05D007775 2.6e-69 266.9 319 48.9
CARHR202970 Cardamine hirsuta HOM05D006096 ORTHO05D007775 2.2e-68 263.8 319 46.1
Os04g0451100 Oryza sativa ssp. japonica HOM05D006096 ORTHO05D007775 3.7e-68 263.1 458 39.3
Thhalv10013818m.g Eutrema salsugineum HOM05D006096 ORTHO05D007775 3.1e-67 260.0 428 40.2
CARHR202960 Cardamine hirsuta HOM05D006096 ORTHO05D007775 3.4e-66 256.5 318 45.6
ClCG07G017370 Citrullus lanatus HOM05D006096 ORTHO05D007775 4.5e-66 256.1 301 47.2
FAN23G0863 Fragaria x ananassa HOM05D006096 ORTHO05D007775 8.5e-65 251.9 437 38.9
Dinv08841 Davidia involucrata HOM05D006096 ORTHO05D007775 3.2e-64 250.0 332 45.8
HPP92_011214 Vanilla planifolia HOM05D006096 ORTHO05D007775 6.1e-63 245.7 461 36.9
Rhsim08G0012600 Rhododendron simsii HOM05D006096 ORTHO05D007775 3.0e-62 243.4 435 37.9
Ciclev10026196m.g Citrus clementina HOM05D006096 ORTHO05D007775 9.7e-61 238.4 321 45.5
Pp3c26_3770 Physcomitrium patens HOM05D006096 ORTHO05D007775 1.3e-60 238.0 461 35.6
Solyc11g009060.2 Solanum lycopersicum HOM05D006096 ORTHO05D007775 3.7e-60 236.5 338 43.2
Cfa002624 Carpinus fangiana HOM05D006096 ORTHO05D007775 1.1e-59 235.0 341 44.0
Manes.13G095500 Manihot esculenta HOM05D006096 ORTHO05D007775 1.1e-59 235.0 341 42.5
Sabra05G0060100 Salix brachista HOM05D006096 ORTHO05D007775 2.4e-59 233.8 241 53.1
PSO447G0355 Papaver somniferum HOM05D006096 ORTHO05D007775 4.1e-59 233.0 434 37.6
CsaV3_4G004600 Cucumis sativus L. HOM05D006096 ORTHO05D007775 2.0e-58 230.7 336 43.2
QL06p048506 Quercus lobata HOM05D006096 ORTHO05D007775 2.0e-58 230.7 353 41.1
CiPaw.03G143900 Carya illinoinensis HOM05D006096 ORTHO05D007775 2.6e-58 230.3 361 42.1
Gohir.D10G103900 Gossypium hirsutum HOM05D006096 ORTHO05D007775 4.2e-56 223.0 326 44.5
Pp3c3_14090 Physcomitrium patens HOM05D006096 ORTHO05D007775 5.5e-56 222.6 441 34.9
AUR62003818 Chenopodium quinoa HOM05D006096 ORTHO05D007775 4.0e-54 216.5 271 47.6
CsaV3_UNG122970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 5.2e-54 216.1 360 40.3
Thecc.01G097900 Theobroma cacao HOM05D006096 ORTHO05D007775 5.2e-54 216.1 331 42.9
Mapoly0077s0016 Marchantia polymorpha HOM05D006096 ORTHO05D007775 3.3e-53 213.4 357 38.9
DCAR_014211 Daucus carota HOM05D006096 ORTHO05D007775 8.2e-52 208.8 317 42.0
FAN19G2919 Fragaria x ananassa HOM05D006096 ORTHO05D007775 1.1e-51 208.4 436 34.9
HanXRQChr02g0032011 Helianthus annuus HOM05D006096 ORTHO05D007775 1.6e-50 204.5 343 40.8
Haze_24882 Corylus avellana HOM05D006096 ORTHO05D007775 1.9e-48 197.6 492 33.3
Sp6g33110 Schrenkiella parvula HOM05D006096 ORTHO05D007775 3.2e-48 196.8 332 38.0
MELO3C017606.2 Cucumis melo HOM05D006096 ORTHO05D007775 2.7e-47 193.7 459 33.6
CBR_g26374 Chara braunii HOM05D006096 ORTHO05D007775 6.1e-47 192.6 314 39.5
Carub.0006s0879 Capsella rubella HOM05D006096 ORTHO05D007775 1.7e-44 184.5 322 37.9
HanXRQChr15g0477621 Helianthus annuus HOM05D006096 ORTHO05D007775 2.8e-44 183.7 345 36.8
MSTRG.23356 Avicennia marina HOM05D006096 ORTHO05D007775 2.4e-43 180.6 312 38.8
AagrBONN_evm.TU.Sc2ySwM_344.1220 Anthoceros agrestis HOM05D006096 ORTHO05D007775 6.5e-41 172.6 332 37.3
Haze_24873 Corylus avellana HOM05D006096 ORTHO05D007775 5.2e-38 162.9 193 49.2
CsaV3_UNG160190 Cucumis sativus L. HOM05D006096 ORTHO05D007775 5.2e-38 162.9 155 54.8
CBR_g53530 Chara braunii HOM05D006096 ORTHO05D007775 2.6e-37 160.6 302 34.4
SMO301G0024 Selaginella moellendorffii HOM05D006096 ORTHO05D007775 2.2e-36 157.5 191 47.6
Ca_16518_v3 Cicer arietinum L. HOM05D006096 ORTHO05D007775 3.5e-34 150.2 335 35.5
FAN28G1526 Fragaria x ananassa HOM05D006096 ORTHO05D007775 2.8e-31 140.6 444 30.2
Nitab4.5_0000743g0130 Nicotiana tabacum HOM05D006096 ORTHO05D007775 2.8e-31 140.6 428 29.2
CsaV3_UNG223570 Cucumis sativus L. HOM05D006096 ORTHO05D007775 1.0e-30 138.7 226 37.2
CARHR202980 Cardamine hirsuta HOM05D006096 ORTHO05D007775 5.7e-29 132.9 286 33.2
CDE06G0254 Ceratophyllum demersum HOM05D006096 ORTHO05D007775 1.1e-22 112.1 310 30.0
QL06p048511 Quercus lobata HOM05D006096 ORTHO05D007775 2.0e-21 107.8 100 55.0
BcaB02g08416 Brassica carinata HOM05D006096 ORTHO05D007775 6.4e-20 102.8 82 64.6
GSVIVG01006632001 Vitis vinifera HOM05D006096 ORTHO05D007775 1.9e-19 101.3 98 54.1
Cre17.g719050 Chlamydomonas reinhardtii HOM05D006096 ORTHO05D007775 3.0e-17 94.0 319 28.2
Gohir.D10G103800 Gossypium hirsutum HOM05D006096 ORTHO05D007775 2.1e-15 87.8 85 52.9
SEGI_01830 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 3.1e-14 84.0 144 36.8
HanXRQChr02g0032001 Helianthus annuus HOM05D006096 ORTHO05D007775 2.9e-12 77.4 74 54.1
Carub.0006s0878 Capsella rubella HOM05D006096 ORTHO05D007775 3.7e-12 77.0 92 47.8
Ah.02g123840 Amaranthus hybridus HOM05D006096 ORTHO05D007775 2.1e-10 71.2 63 54.0
Cc08_g12120 Coffea canephora HOM05D005131 ORTHO05D003188 3.5e-10 70.5 86 41.9
Cc03_g11790 Coffea canephora HOM05D006096 ORTHO05D007775 3.3e-08 63.9 121 36.4
SEGI_02986 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 3.3e-08 63.9 65 47.7
Actinidia28243 Actinidia chinensis HOM05D006096 ORTHO05D009823 5.6e-08 63.2 203 29.6


User provided reference genes

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