Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 5.0e-61 237.7 125 100.0
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 1.1e-15 87.0 85 56.5
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 4.6e-14 81.6 98 52.0
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 4.6e-14 81.6 96 51.0
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 7.8e-14 80.9 114 48.2
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 1.3e-13 80.1 86 54.7
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 1.7e-13 79.7 93 50.5
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 3.0e-13 79.0 112 44.6
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 3.9e-13 78.6 86 53.5
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 8.6e-13 77.4 111 48.6
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 8.6e-13 77.4 81 55.6
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 8.6e-13 77.4 82 57.3
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 8.6e-13 77.4 85 54.1
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 8.6e-13 77.4 97 51.5
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 8.6e-13 77.4 109 46.8
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 1.5e-12 76.6 106 43.4
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 1.5e-12 76.6 107 51.4
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 2.5e-12 75.9 111 45.9
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.5e-12 75.9 111 45.9
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 5.6e-12 74.7 124 41.1
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 7.3e-12 74.3 107 47.7
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 7.3e-12 74.3 108 50.0
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 7.3e-12 74.3 79 53.2
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 9.5e-12 73.9 75 54.7
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 9.5e-12 73.9 74 58.1
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 9.5e-12 73.9 126 42.9
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 1.6e-11 73.2 112 43.8
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 1.6e-11 73.2 106 45.3
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 1.6e-11 73.2 93 50.5
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 1.6e-11 73.2 111 42.3
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 2.1e-11 72.8 78 52.6
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 2.1e-11 72.8 125 42.4
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 2.8e-11 72.4 108 45.4
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 2.8e-11 72.4 83 54.2
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 2.8e-11 72.4 116 43.1
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 3.6e-11 72.0 106 43.4
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 3.6e-11 72.0 110 47.3
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 3.6e-11 72.0 120 40.8
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 4.7e-11 71.6 93 48.4
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 4.7e-11 71.6 123 42.3
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 4.7e-11 71.6 120 41.7
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 6.2e-11 71.2 119 42.9
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 6.2e-11 71.2 107 48.6
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 8.1e-11 70.9 80 56.2
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 1.1e-10 70.5 107 44.9
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.4e-10 70.1 108 43.5
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 1.4e-10 70.1 80 51.2
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 1.8e-10 69.7 109 45.9
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 1.8e-10 69.7 109 45.9
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 1.8e-10 69.7 80 53.8
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 1.8e-10 69.7 80 51.2
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 2.3e-10 69.3 93 45.2
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 2.3e-10 69.3 107 44.9
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 3.1e-10 68.9 76 51.3
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 3.1e-10 68.9 125 40.8
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 3.1e-10 68.9 117 41.9
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 4.0e-10 68.6 107 43.0
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 4.0e-10 68.6 77 53.2
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 5.2e-10 68.2 107 44.9
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 8.9e-10 67.4 118 39.8
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 8.9e-10 67.4 82 48.8
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 8.9e-10 67.4 77 55.8
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 1.2e-09 67.0 101 41.6
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 1.5e-09 66.6 107 42.1
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 2.0e-09 66.2 93 45.2
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 2.0e-09 66.2 89 47.2
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 3.4e-09 65.5 119 41.2
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 3.4e-09 65.5 85 51.8
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 3.4e-09 65.5 73 52.1
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 4.4e-09 65.1 76 51.3
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 4.4e-09 65.1 76 51.3
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.4e-09 65.1 119 41.2
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.4e-09 65.1 63 58.7
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 5.8e-09 64.7 107 41.1
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 5.8e-09 64.7 107 41.1
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 5.8e-09 64.7 105 43.8
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 7.5e-09 64.3 110 41.8
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 7.5e-09 64.3 70 52.9
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 1.3e-08 63.5 58 60.3
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 1.3e-08 63.5 58 60.3
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.3e-08 63.5 58 56.9
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 1.3e-08 63.5 108 40.7
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 1.3e-08 63.5 76 50.0
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 1.3e-08 63.5 73 49.3
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 1.7e-08 63.2 67 55.2
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 1.7e-08 63.2 116 40.5
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.7e-08 63.2 82 47.6
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 1.7e-08 63.2 82 47.6
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 2.2e-08 62.8 92 44.6
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.2e-08 62.8 110 40.0
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 3.7e-08 62.0 67 53.7
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 3.7e-08 62.0 71 49.3
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 4.9e-08 61.6 76 50.0
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 4.9e-08 61.6 82 46.3
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 6.4e-08 61.2 59 57.6
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.4e-07 60.1 145 35.9
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 1.9e-07 59.7 83 43.4
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 3.2e-07 58.9 112 39.3
DCAR_025920 Daucus carota HOM05D006100 ORTHO05D007539 5.4e-07 58.2 59 59.3
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 9.2e-07 57.4 60 53.3
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 1.6e-06 56.6 117 39.3
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 2.7e-06 55.8 82 46.3
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 3.5e-06 55.5 104 42.3
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 4.6e-06 55.1 105 40.0
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 4.6e-06 55.1 61 50.8
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 4.6e-06 55.1 88 46.6
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 6.0e-06 54.7 84 40.5
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 6.0e-06 54.7 56 53.6


User provided reference genes

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