Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 2.1e-107 392.5 221 100.0
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 9.7e-68 260.8 173 78.0
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 1.4e-66 256.9 169 78.1
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 2.6e-65 252.7 230 67.0
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 6.5e-64 248.1 169 75.1
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 6.5e-64 248.1 197 69.0
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 1.9e-63 246.5 241 63.1
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 4.7e-62 241.9 200 68.5
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 5.2e-61 238.4 193 68.4
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 1.1e-60 237.3 223 67.7
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 1.5e-60 236.9 227 64.3
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 5.7e-60 235.0 224 65.2
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 5.7e-60 235.0 197 67.0
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 7.5e-60 234.6 192 67.2
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 9.7e-60 234.2 187 67.9
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 1.3e-59 233.8 184 67.9
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 1.3e-59 233.8 191 68.6
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 1.7e-59 233.4 196 66.3
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 1.7e-59 233.4 196 66.3
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 1.7e-59 233.4 183 66.7
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 2.8e-59 232.6 196 66.3
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 3.7e-59 232.3 188 66.5
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 3.7e-59 232.3 137 83.9
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 4.8e-59 231.9 187 66.8
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 1.1e-58 230.7 157 74.5
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 1.1e-58 230.7 166 73.5
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 1.4e-58 230.3 133 85.0
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 1.4e-58 230.3 178 69.7
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 1.8e-58 229.9 133 84.2
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 2.4e-58 229.6 192 65.6
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 4.1e-58 228.8 226 67.7
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 7.0e-58 228.0 196 65.8
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 9.1e-58 227.6 133 82.7
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 1.2e-57 227.3 174 70.7
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 1.2e-57 227.3 187 65.2
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 1.2e-57 227.3 193 65.8
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 1.2e-57 227.3 133 82.7
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 1.2e-57 227.3 133 82.7
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 1.6e-57 226.9 240 64.2
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 1.6e-57 226.9 137 82.5
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 2.7e-57 226.1 169 71.0
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 2.7e-57 226.1 172 69.2
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 2.7e-57 226.1 137 81.8
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 2.7e-57 226.1 224 66.1
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 4.5e-57 225.3 179 68.2
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 5.9e-57 224.9 137 81.0
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 5.9e-57 224.9 133 82.7
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 5.9e-57 224.9 225 63.6
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 5.9e-57 224.9 226 62.4
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 5.9e-57 224.9 175 66.3
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 7.7e-57 224.6 223 65.9
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 1.0e-56 224.2 143 78.3
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 1.0e-56 224.2 177 68.4
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 1.0e-56 224.2 137 81.0
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 1.3e-56 223.8 223 61.0
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 1.3e-56 223.8 186 65.1
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.3e-56 223.8 186 65.1
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 1.3e-56 223.8 133 82.0
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 2.2e-56 223.0 143 78.3
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 2.2e-56 223.0 174 69.5
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 2.9e-56 222.6 131 82.4
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 3.8e-56 222.2 133 81.2
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 5.0e-56 221.9 131 82.4
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 6.5e-56 221.5 170 69.4
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 6.5e-56 221.5 225 65.3
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 8.5e-56 221.1 154 72.7
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 4.2e-55 218.8 130 82.3
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 4.2e-55 218.8 234 60.3
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 1.2e-54 217.2 188 60.6
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 1.2e-54 217.2 171 67.3
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 1.2e-54 217.2 136 78.7
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 2.1e-54 216.5 132 80.3
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 1.4e-53 213.8 191 59.7
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 1.8e-53 213.4 191 59.7
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.8e-53 213.4 161 67.7
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 2.3e-53 213.0 198 60.1
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 4.0e-53 212.2 191 58.6
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 4.0e-53 212.2 259 51.7
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 6.8e-53 211.5 194 59.3
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 6.8e-53 211.5 194 59.3
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 1.2e-52 210.7 225 56.0
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 2.6e-52 209.5 193 59.1
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 2.6e-52 209.5 193 59.1
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 3.4e-52 209.1 181 60.2
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 7.0e-50 201.4 200 57.0
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 4.5e-49 198.7 196 57.1
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea HOM05D006601 ORTHO05D008281 2.9e-48 196.1 193 60.1
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 8.5e-48 194.5 122 79.5
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 2.5e-47 193.0 154 66.9
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 5.7e-44 181.8 181 55.2
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 1.4e-42 177.2 132 63.6
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 1.8e-42 176.8 134 64.9
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 2.0e-41 173.3 174 59.8
Actinidia31106 Actinidia chinensis HOM05D006601 ORTHO05D008281 1.1e-39 167.5 92 88.0
CDE04G0959 Ceratophyllum demersum HOM05D006601 ORTHO05D008281 2.1e-38 163.3 192 52.1
Nitab4.5_0002586g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 5.4e-34 148.7 155 60.6
Haze_03300 Corylus avellana HOM05D006601 ORTHO05D008281 2.1e-30 136.7 93 77.4
AUR62042084 Chenopodium quinoa HOM05D006601 ORTHO05D008281 8.0e-30 134.8 184 49.5
MCO05G050 Micromonas commoda HOM05D006601 ORTHO05D008281 1.0e-29 134.4 134 56.0
Sc09g0005300 Simmondsia chinensis HOM05D006601 ORTHO05D008281 7.5e-28 128.3 144 53.5
BcaC07g39592 Brassica carinata HOM05D006601 ORTHO05D008281 2.2e-27 126.7 200 44.0
Cre18.g749347 Chlamydomonas reinhardtii HOM05D006601 ORTHO05D008281 1.4e-26 124.0 175 45.1
PSO692G0001 Papaver somniferum HOM05D006601 ORTHO05D008281 1.1e-23 114.4 133 54.9
PSO801G0555 Papaver somniferum HOM05D006601 ORTHO05D008281 1.1e-23 114.4 133 54.9
Aqoxy2G01116 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 2.2e-19 100.1 105 57.1
Ah.06g186680 Amaranthus hybridus HOM05D006601 ORTHO05D008281 2.7e-17 93.2 114 51.8
CiPaw.14G033700 Carya illinoinensis HOM05D006601 ORTHO05D008281 1.3e-16 90.9 82 63.4
Cfa024623 Carpinus fangiana HOM05D006601 ORTHO05D008281 1.7e-16 90.5 108 43.5
Zm00001eb039400 Zea mays HOM05D006601 ORTHO05D008281 1.1e-15 87.8 108 50.0
Lsat_1_v5_gn_4_8660 Lactuca sativa HOM05D006601 ORTHO05D008281 1.4e-13 80.9 54 74.1
EL10Ac7g17292 Beta vulgaris HOM05D006601 ORTHO05D008281 7.1e-10 68.6 31 87.1
Aqoxy2G01117 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 6.0e-09 65.5 31 83.9
Hma1.2p1_1491F.1_g286720 Hydrangea macrophylla HOM05D006601 ORTHO05D008281 6.6e-08 62.0 37 81.1
EL10Ac8g19171 Beta vulgaris HOM05D006601 ORTHO05D008281 2.1e-06 57.0 25 88.0


User provided reference genes

Program Settings