Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14460 Utricularia gibba HOM05D006018 ORTHO05D007545 9.7e-175 616.7 306 100.0
Migut.F00847 Erythranthe guttata HOM05D006018 ORTHO05D007545 5.7e-127 458.0 305 72.5
MSTRG.9035 Avicennia marina HOM05D006018 ORTHO05D007545 1.7e-126 456.4 307 71.3
SGA_v2.0_scaffold2G01315 Striga asiatica HOM05D006018 ORTHO05D007545 3.7e-126 455.3 308 71.8
SalBow3G1532 Salvia bowleyana HOM05D006018 ORTHO05D007545 1.5e-122 443.4 318 69.5
CSS0019594 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 4.0e-120 435.3 305 69.8
CSS0043702 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 4.0e-120 435.3 305 69.8
ECA238G1473 Erigeron canadensis HOM05D006018 ORTHO05D007545 6.8e-120 434.5 304 69.4
CANSAT56G4342 Cannabis sativa HOM05D006018 ORTHO05D007545 1.5e-119 433.3 305 69.8
CiPaw.13G043500 Carya illinoinensis HOM05D006018 ORTHO05D007545 5.8e-119 431.4 305 68.2
Phvul.007G234300 Phaseolus vulgaris HOM05D006018 ORTHO05D007545 7.5e-119 431.0 305 68.2
CSS0004952 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 9.8e-119 430.6 305 69.8
Dinv08587 Davidia involucrata HOM05D006018 ORTHO05D007545 2.9e-118 429.1 305 68.2
Nn6g34699 Nelumbo nucifera HOM05D006018 ORTHO05D007545 2.9e-118 429.1 305 67.5
PGR044G0766 Punica granatum HOM05D006018 ORTHO05D007545 3.7e-118 428.7 305 68.2
Eucgr.J00283 Eucalyptus grandis HOM05D006018 ORTHO05D007545 6.4e-118 427.9 305 67.9
FvH4_7g03231 Fragaria vesca HOM05D006018 ORTHO05D007545 6.4e-118 427.9 306 68.3
MD07G1062200 Malus domestica HOM05D006018 ORTHO05D007545 8.3e-118 427.6 305 67.9
Peaxi162Scf00725g00522 Petunia axillaris HOM05D006018 ORTHO05D007545 1.4e-117 426.8 305 68.2
Gorai.012G019800 Gossypium raimondii HOM05D006018 ORTHO05D007545 4.1e-117 425.2 306 68.0
PSO384G0865 Papaver somniferum HOM05D006018 ORTHO05D007545 4.1e-117 425.2 305 65.2
Gohir.D04G017100 Gossypium hirsutum HOM05D006018 ORTHO05D007545 5.4e-117 424.9 306 67.6
Prupe.2G072000 Prunus persica HOM05D006018 ORTHO05D007545 7.0e-117 424.5 305 67.9
RcHm_v2.0_Chr1g0325281 Rosa chinensis HOM05D006018 ORTHO05D007545 7.0e-117 424.5 302 68.2
VMungo0720G2948 Vigna mungo HOM05D006018 ORTHO05D007545 9.2e-117 424.1 305 66.9
AT2G26230 Arabidopsis thaliana HOM05D006018 ORTHO05D007545 1.2e-116 423.7 305 69.2
TWI38G2380 Tripterygium wilfordii HOM05D006018 ORTHO05D007545 1.2e-116 423.7 307 68.4
PSO339G6589 Papaver somniferum HOM05D006018 ORTHO05D007545 1.6e-116 423.3 305 64.9
GSVIVG01034634001 Vitis vinifera HOM05D006018 ORTHO05D007545 2.0e-116 422.9 305 66.6
Glyma.20G072400 Glycine max HOM05D006018 ORTHO05D007545 4.6e-116 421.8 305 66.2
C07p13770 Brassica napus HOM05D006018 ORTHO05D007545 6.0e-116 421.4 308 67.2
PGSC0003DMG401001978 Solanum tuberosum HOM05D006018 ORTHO05D007545 1.0e-115 420.6 305 65.6
BcaC06g35533 Brassica carinata HOM05D006018 ORTHO05D007545 1.3e-115 420.2 308 66.9
MELO3C012335.2 Cucumis melo HOM05D006018 ORTHO05D007545 1.3e-115 420.2 307 66.8
Aqoxy1G00667 Aquilegia oxysepala HOM05D006018 ORTHO05D007545 2.3e-115 419.5 306 65.4
CARHR103400 Cardamine hirsuta HOM05D006018 ORTHO05D007545 2.3e-115 419.5 305 67.5
Ciclev10016037m.g Citrus clementina HOM05D006018 ORTHO05D007545 2.3e-115 419.5 305 67.2
Duzib106G1265 Durio zibethinus HOM05D006018 ORTHO05D007545 2.3e-115 419.5 306 65.7
Gohir.A05G398800 Gossypium hirsutum HOM05D006018 ORTHO05D007545 2.3e-115 419.5 306 67.0
BolC7t41872H Brassica oleracea HOM05D006018 ORTHO05D007545 3.0e-115 419.1 308 66.9
Lj6g0008960 Lotus japonicus HOM05D006018 ORTHO05D007545 3.0e-115 419.1 305 66.2
Psat6g049120 Pisum sativum HOM05D006018 ORTHO05D007545 3.0e-115 419.1 306 65.7
Glyma.10G121524 Glycine max HOM05D006018 ORTHO05D007545 3.9e-115 418.7 305 64.6
Nitab4.5_0007799g0030 Nicotiana tabacum HOM05D006018 ORTHO05D007545 3.9e-115 418.7 305 64.9
Ca_12272_v3 Cicer arietinum L. HOM05D006018 ORTHO05D007545 5.0e-115 418.3 306 66.0
COL.COLO4_07822 Corchorus olitorius HOM05D006018 ORTHO05D007545 5.0e-115 418.3 309 67.3
TAR623G0250 Trochodendron aralioides HOM05D006018 ORTHO05D007545 8.6e-115 417.5 305 66.6
AL1G64680 Arabidopsis lyrata HOM05D006018 ORTHO05D007545 1.1e-114 417.2 303 68.6
Carub.0002s0907 Capsella rubella HOM05D006018 ORTHO05D007545 1.5e-114 416.8 305 67.9
BcaB06g26497 Brassica carinata HOM05D006018 ORTHO05D007545 1.9e-114 416.4 307 66.8
BraA07t28684Z Brassica rapa HOM05D006018 ORTHO05D007545 2.5e-114 416.0 303 67.3
Solyc11g006550.3 Solanum lycopersicum HOM05D006018 ORTHO05D007545 2.5e-114 416.0 302 65.6
FAN10G2047 Fragaria x ananassa HOM05D006018 ORTHO05D007545 3.3e-114 415.6 306 67.0
Sed0014972 Sechium edule HOM05D006018 ORTHO05D007545 4.3e-114 415.2 308 67.5
A07p08930 Brassica napus HOM05D006018 ORTHO05D007545 7.3e-114 414.5 303 67.0
Medtr1g048370 Medicago truncatula HOM05D006018 ORTHO05D007545 7.3e-114 414.5 306 65.4
Lalb_Chr19g0128951 Lupinus albus HOM05D006018 ORTHO05D007545 1.2e-113 413.7 306 66.3
CsaV3_5G035210 Cucumis sativus L. HOM05D006018 ORTHO05D007545 2.1e-113 412.9 307 65.5
Sopen11g002450 Solanum pennellii HOM05D006018 ORTHO05D007545 2.1e-113 412.9 302 65.2
Thhalv10021194m.g Eutrema salsugineum HOM05D006018 ORTHO05D007545 2.8e-113 412.5 305 66.2
TPR.G19796 Trifolium pratense HOM05D006018 ORTHO05D007545 4.7e-113 411.8 297 67.7
Thecc.10G116100 Theobroma cacao HOM05D006018 ORTHO05D007545 6.2e-113 411.4 306 66.3
HanXRQChr02g0053551 Helianthus annuus HOM05D006018 ORTHO05D007545 1.4e-112 410.2 299 67.6
Manes.10G059900 Manihot esculenta HOM05D006018 ORTHO05D007545 1.4e-112 410.2 306 65.7
AUR62034490 Chenopodium quinoa HOM05D006018 ORTHO05D007545 1.8e-112 409.8 305 63.0
arahy.Tifrunner.gnm1.ann1.QNY1I5 Arachis hypogaea HOM05D006018 ORTHO05D007545 3.1e-112 409.1 305 66.2
CAN.G143.25 Capsicum annuum HOM05D006018 ORTHO05D007545 1.2e-111 407.1 302 63.6
Aa31LG2G1810 Aethionema arabicum HOM05D006018 ORTHO05D007545 1.5e-111 406.8 304 66.4
MD02G1258600 Malus domestica HOM05D006018 ORTHO05D007545 1.5e-111 406.8 305 65.2
EL10Ac4g08718 Beta vulgaris HOM05D006018 ORTHO05D007545 2.6e-111 406.0 305 62.6
Hund06805 Selenicereus undatus HOM05D006018 ORTHO05D007545 4.4e-111 405.2 323 62.5
Cpa.g.sc54.21 Carica papaya HOM05D006018 ORTHO05D007545 1.3e-110 403.7 303 65.0
THA.LOC104801755 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 3.7e-110 402.1 306 64.4
THA.LOC104823771 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 3.7e-110 402.1 302 65.2
Potri.010G242600 Populus trichocarpa HOM05D006018 ORTHO05D007545 4.9e-110 401.7 306 64.7
Sp3g21150 Schrenkiella parvula HOM05D006018 ORTHO05D007545 4.9e-110 401.7 305 64.3
SpUn0047_0030 Schrenkiella parvula HOM05D006018 ORTHO05D007545 4.9e-110 401.7 305 64.3
THA.LOC104804947 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 6.4e-110 401.4 306 63.7
arahy.Tifrunner.gnm1.ann1.Z71440 Arachis hypogaea HOM05D006018 ORTHO05D007545 1.9e-109 399.8 305 64.9
Cc02_g09390 Coffea canephora HOM05D006018 ORTHO05D007545 1.9e-109 399.8 305 64.3
CDE02G2990 Ceratophyllum demersum HOM05D006018 ORTHO05D007545 5.4e-109 398.3 305 63.0
Sabra10G0189600 Salix brachista HOM05D006018 ORTHO05D007545 7.0e-109 397.9 308 64.0
Nitab4.5_0001781g0180 Nicotiana tabacum HOM05D006018 ORTHO05D007545 9.2e-109 397.5 305 63.6
arahy.Tifrunner.gnm1.ann1.Z7U9ST Arachis hypogaea HOM05D006018 ORTHO05D007545 1.6e-108 396.7 313 63.6
RcHm_v2.0_Chr1g0325311 Rosa chinensis HOM05D006018 ORTHO05D007545 1.6e-108 396.7 348 58.6
arahy.Tifrunner.gnm1.ann1.V4FSHN Arachis hypogaea HOM05D006018 ORTHO05D007545 3.9e-107 392.1 321 61.4
Zm00001eb146880 Zea mays HOM05D006018 ORTHO05D007545 5.6e-106 388.3 307 62.9
Atru.chr12.1071 Acer truncatum HOM05D006018 ORTHO05D007545 2.1e-105 386.3 279 67.7
FAN01G2803 Fragaria x ananassa HOM05D006018 ORTHO05D007545 2.1e-105 386.3 305 63.0
Lsat_1_v5_gn_2_105841 Lactuca sativa HOM05D006018 ORTHO05D007545 6.2e-105 384.8 306 64.4
Haze_03464 Corylus avellana HOM05D006018 ORTHO05D007545 3.1e-104 382.5 382 52.6
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 8.9e-104 380.9 276 65.9
ATR0772G096 Amborella trichopoda HOM05D006018 ORTHO05D007545 4.4e-103 378.6 298 62.8
Ah.06g186820 Amaranthus hybridus HOM05D006018 ORTHO05D007545 9.9e-103 377.5 320 57.2
ClCG05G021930 Citrullus lanatus HOM05D006018 ORTHO05D007545 1.7e-102 376.7 308 62.7
vmacro10321 Vaccinium macrocarpon HOM05D006018 ORTHO05D007545 1.9e-98 363.2 340 56.5
FAN03G1346 Fragaria x ananassa HOM05D006018 ORTHO05D007545 8.9e-96 354.4 283 62.9
Hma1.2p1_0381F.1_g139980 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 7.6e-95 351.3 240 69.6
Actinidia34731 Actinidia chinensis HOM05D006018 ORTHO05D007545 1.4e-93 347.1 245 68.6
Nn2g14297 Nelumbo nucifera HOM05D006018 ORTHO05D007545 1.7e-91 340.1 305 57.0
HPP92_027461 Vanilla planifolia HOM05D006018 ORTHO05D007545 2.8e-89 332.8 306 54.2
Lj3A923T60 Lonicera japonica HOM05D006018 ORTHO05D007545 3.6e-89 332.4 285 59.3
AUR62034169 Chenopodium quinoa HOM05D006018 ORTHO05D007545 4.0e-88 328.9 241 63.9
Rhsim09G0141100 Rhododendron simsii HOM05D006018 ORTHO05D007545 2.0e-87 326.6 303 56.1
DCAR_004552 Daucus carota HOM05D006018 ORTHO05D007545 6.0e-84 315.1 247 63.6
Pp3c14_15560 Physcomitrium patens HOM05D006018 ORTHO05D007545 1.0e-83 314.3 303 53.1
SMO134G0227 Selaginella moellendorffii HOM05D006018 ORTHO05D007545 5.1e-83 312.0 303 53.8
AagrBONN_evm.TU.Sc2ySwM_344.453 Anthoceros agrestis HOM05D006018 ORTHO05D007545 2.1e-81 306.6 291 54.0
QL04p047894 Quercus lobata HOM05D006018 ORTHO05D007545 8.1e-81 304.7 209 67.5
Sc09g0005130 Simmondsia chinensis HOM05D006018 ORTHO05D007545 6.9e-80 301.6 228 64.0
Mapoly0079s0008 Marchantia polymorpha HOM05D006018 ORTHO05D007545 1.7e-78 297.0 299 51.8
Cre12.g504950 Chlamydomonas reinhardtii HOM05D006018 ORTHO05D007545 1.4e-69 267.3 290 47.2
MCO08G151 Micromonas commoda HOM05D006018 ORTHO05D007545 5.7e-58 228.8 290 43.4
PRCOL_00005817 Prasinoderma coloniale HOM05D006018 ORTHO05D007545 7.4e-58 228.4 320 44.1
CBR_g20325 Chara braunii HOM05D006018 ORTHO05D007545 1.6e-57 227.3 179 60.9
CSS0009212 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 8.8e-51 204.9 148 68.2
Os01g0865100 Oryza sativa ssp. japonica HOM05D006018 ORTHO05D007545 2.5e-50 203.4 158 62.0
CSS0030296 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 9.1e-48 194.9 146 67.1
Oeu009248.1 Olea europaea HOM05D006018 ORTHO05D007545 1.1e-40 171.4 192 52.6
Hma1.2p1_0381F.1_g139990 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 1.3e-30 137.9 149 49.7
Cfa010524 Carpinus fangiana HOM05D006018 ORTHO05D007545 5.5e-29 132.5 148 47.3
SEGI_29992 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 6.8e-27 125.6 98 63.3
arahy.Tifrunner.gnm1.ann1.BN00BV Arachis hypogaea HOM05D006018 ORTHO05D007545 1.4e-24 117.9 96 61.5
arahy.Tifrunner.gnm1.ann1.WX42FR Arachis hypogaea HOM05D006018 ORTHO05D007545 2.7e-23 113.6 95 60.0
Eucgr.J00287 Eucalyptus grandis HOM05D006018 ORTHO05D007545 3.0e-19 100.1 85 57.6
FAN01G0562 Fragaria x ananassa HOM05D006018 ORTHO05D007545 6.8e-19 99.0 67 70.1
SEGI_30163 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 4.4e-18 96.3 70 58.6
SEGI_33218 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 1.0e-14 85.1 71 57.7
SEGI_30780 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 6.6e-14 82.4 63 61.9


User provided reference genes

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