Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 1.4e-113 412.9 205 100.0
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 2.1e-61 239.6 197 62.4
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 3.7e-61 238.8 180 66.1
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 2.4e-60 236.1 185 63.8
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 3.4e-59 232.3 154 72.7
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 4.5e-59 231.9 209 57.9
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 4.5e-59 231.9 186 62.9
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 4.5e-59 231.9 186 62.4
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 4.5e-59 231.9 160 68.8
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 4.5e-59 231.9 177 66.1
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 5.9e-59 231.5 175 64.0
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 5.9e-59 231.5 186 62.9
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 7.6e-59 231.1 205 58.5
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 1.3e-58 230.3 193 60.6
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 3.8e-58 228.8 160 67.5
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 1.1e-57 227.3 153 71.2
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 1.4e-57 226.9 157 66.9
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 1.9e-57 226.5 150 69.3
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 1.9e-57 226.5 152 71.7
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 2.5e-57 226.1 154 69.5
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 2.5e-57 226.1 165 66.1
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 4.2e-57 225.3 161 65.2
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 1.2e-56 223.8 193 59.6
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 2.7e-56 222.6 151 72.2
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 4.6e-56 221.9 159 66.7
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 6.1e-56 221.5 157 67.5
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 1.0e-55 220.7 206 56.3
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 2.3e-55 219.5 156 68.6
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 2.3e-55 219.5 162 67.3
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 3.0e-55 219.2 154 67.5
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 3.0e-55 219.2 156 67.9
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 3.0e-55 219.2 148 69.6
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 3.9e-55 218.8 154 68.8
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 5.1e-55 218.4 159 65.4
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 5.1e-55 218.4 147 69.4
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 6.7e-55 218.0 151 68.2
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 6.7e-55 218.0 143 70.6
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 8.7e-55 217.6 151 67.5
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 8.7e-55 217.6 151 67.5
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 8.7e-55 217.6 155 66.5
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 8.7e-55 217.6 153 66.7
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 8.7e-55 217.6 151 68.9
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 8.7e-55 217.6 147 69.4
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 1.5e-54 216.9 152 69.7
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 1.5e-54 216.9 154 68.2
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 2.5e-54 216.1 155 65.8
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 4.3e-54 215.3 151 68.2
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 5.7e-54 214.9 172 62.2
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 7.4e-54 214.5 151 69.5
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 7.4e-54 214.5 162 63.6
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 9.7e-54 214.2 154 66.9
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 9.7e-54 214.2 151 68.9
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 9.7e-54 214.2 166 60.8
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 9.7e-54 214.2 163 63.8
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 1.3e-53 213.8 149 68.5
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 4.8e-53 211.8 195 55.4
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 6.3e-53 211.5 163 63.2
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 6.3e-53 211.5 154 66.2
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 8.2e-53 211.1 196 54.1
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 1.4e-52 210.3 146 69.9
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 2.4e-52 209.5 156 67.3
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 2.4e-52 209.5 195 55.4
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 3.1e-52 209.1 155 65.2
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 3.1e-52 209.1 157 63.1
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 1.5e-51 206.8 158 61.4
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 2.0e-51 206.5 199 54.8
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 2.0e-51 206.5 152 63.2
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 2.6e-51 206.1 152 63.8
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.6e-51 206.1 163 60.7
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.6e-51 206.1 163 60.7
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 5.9e-51 204.9 163 60.1
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 5.9e-51 204.9 163 60.7
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 1.7e-50 203.4 150 64.7
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 2.2e-50 203.0 192 53.6
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 3.8e-50 202.2 163 60.7
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 8.5e-50 201.1 149 63.1
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 1.4e-49 200.3 156 64.1
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 5.5e-49 198.4 163 59.5
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 7.9e-48 194.5 131 68.7
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 3.9e-47 192.2 222 49.1
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 5.1e-47 191.8 161 60.9
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 6.7e-47 191.4 152 61.8
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 9.1e-44 181.0 147 59.9
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 1.2e-43 180.6 134 67.2
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 1.5e-43 180.3 120 70.8
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 2.0e-43 179.9 185 54.1
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 2.9e-42 176.0 154 59.1
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 6.5e-42 174.9 136 61.8
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 1.2e-40 170.6 130 61.5
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 1.8e-39 166.8 156 48.7
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 1.8e-39 166.8 156 48.7
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 2.0e-38 163.3 142 59.2
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 9.7e-38 161.0 180 51.7
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 1.8e-36 156.8 151 50.3
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 8.5e-34 147.9 185 41.6
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 2.3e-31 139.8 167 40.7
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 6.3e-29 131.7 89 69.7
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 2.7e-24 116.3 101 53.5
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 2.0e-19 100.1 113 46.0
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 2.5e-17 93.2 72 65.3
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 3.2e-17 92.8 146 33.6
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 5.2e-15 85.5 154 35.1
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 8.8e-15 84.7 162 36.4
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 4.4e-14 82.4 74 50.0
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 5.9e-11 72.0 56 57.1
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 5.9e-11 72.0 152 31.6
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 2.3e-10 70.1 122 31.1
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 2.5e-09 66.6 84 45.2
Oeu034116.1 Olea europaea HOM05D007188 ORTHO05D009102 7.3e-09 65.1 50 60.0
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 6.1e-08 62.0 44 63.6
vmacro04837 Vaccinium macrocarpon HOM05D000026 ORTHO05D000094 1.0e-07 61.2 153 31.4


User provided reference genes

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