Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_88.g27770 Utricularia gibba HOM05D005912 ORTHO05D007329 1.8e-61 239.2 133 100.0
SGA_v2.0_scaffold132G34545 Striga asiatica HOM05D005912 ORTHO05D007329 1.9e-18 96.3 60 71.7
Dinv40154 Davidia involucrata HOM05D005912 ORTHO05D007329 4.2e-18 95.1 104 48.1
CSS0031078 Camellia sinensis var. sinensis HOM05D005912 ORTHO05D007329 1.2e-17 93.6 104 50.0
CAN.G890.19 Capsicum annuum HOM05D005912 ORTHO05D007329 2.1e-17 92.8 106 48.1
Rhsim10G0204000 Rhododendron simsii HOM05D005912 ORTHO05D007329 2.1e-17 92.8 57 68.4
MSTRG.2738 Avicennia marina HOM05D005912 ORTHO05D007329 8.0e-17 90.9 105 47.6
PGSC0003DMG400001581 Solanum tuberosum HOM05D005912 ORTHO05D007329 2.3e-16 89.4 106 46.2
Atru.chr3.926 Acer truncatum HOM05D005912 ORTHO05D007329 3.0e-16 89.0 53 71.7
Ciclev10025822m.g Citrus clementina HOM05D005912 ORTHO05D007329 4.0e-16 88.6 55 67.3
Solyc02g083270.4 Solanum lycopersicum HOM05D005912 ORTHO05D007329 4.0e-16 88.6 106 47.2
Actinidia17396 Actinidia chinensis HOM05D005912 ORTHO05D007329 5.2e-16 88.2 104 48.1
GSVIVG01002335001 Vitis vinifera HOM05D005912 ORTHO05D007329 5.2e-16 88.2 53 69.8
Lj2A487G56 Lonicera japonica HOM05D005912 ORTHO05D007329 6.8e-16 87.8 61 62.3
Peaxi162Scf00300g00017 Petunia axillaris HOM05D005912 ORTHO05D007329 6.8e-16 87.8 106 45.3
vmacro20502 Vaccinium macrocarpon HOM05D005912 ORTHO05D007329 6.8e-16 87.8 54 68.5
Migut.L00742 Erythranthe guttata HOM05D005912 ORTHO05D007329 8.9e-16 87.4 61 67.2
HanXRQChr07g0192501 Helianthus annuus HOM05D005912 ORTHO05D007329 1.2e-15 87.0 59 64.4
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 1.5e-15 86.7 105 45.7
TAR625G0585 Trochodendron aralioides HOM05D005912 ORTHO05D007329 1.5e-15 86.7 115 43.5
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 2.0e-15 86.3 107 43.9
Sc07g0001240 Simmondsia chinensis HOM05D005912 ORTHO05D007329 2.0e-15 86.3 54 72.2
Aqoxy6G01899 Aquilegia oxysepala HOM05D005912 ORTHO05D007329 2.6e-15 85.9 107 41.1
HanXRQChr14g0442051 Helianthus annuus HOM05D005912 ORTHO05D007329 2.6e-15 85.9 103 43.7
Oeu012550.1 Olea europaea HOM05D005912 ORTHO05D007329 2.6e-15 85.9 58 65.5
Cfa007040 Carpinus fangiana HOM05D005912 ORTHO05D007329 4.4e-15 85.1 50 72.0
Manes.01G152000 Manihot esculenta HOM05D005912 ORTHO05D007329 4.4e-15 85.1 99 48.5
AUR62029896 Chenopodium quinoa HOM05D005912 ORTHO05D007329 9.8e-15 84.0 53 66.0
Potri.005G106500 Populus trichocarpa HOM05D005912 ORTHO05D007329 9.8e-15 84.0 55 61.8
Sabra05G0087400 Salix brachista HOM05D005912 ORTHO05D007329 9.8e-15 84.0 55 61.8
Sopen02g028060 Solanum pennellii HOM05D005912 ORTHO05D007329 9.8e-15 84.0 106 45.3
Ah.11g045130 Amaranthus hybridus HOM05D005912 ORTHO05D007329 1.7e-14 83.2 52 69.2
Lsat_1_v5_gn_2_75281 Lactuca sativa HOM05D005912 ORTHO05D007329 1.7e-14 83.2 103 44.7
MBI08_g40329_MAGBIO Magnolia biondii HOM05D005912 ORTHO05D007329 1.7e-14 83.2 53 66.0
PGR102G2191 Punica granatum HOM05D005912 ORTHO05D007329 1.7e-14 83.2 52 69.2
TAR288G0001 Trochodendron aralioides HOM05D005912 ORTHO05D007329 2.8e-14 82.4 53 69.8
Haze_03689 Corylus avellana HOM05D005912 ORTHO05D007329 3.7e-14 82.0 50 68.0
Cc07_g11440 Coffea canephora HOM05D005912 ORTHO05D007329 4.9e-14 81.6 106 53.8
CiPaw.08G179600 Carya illinoinensis HOM05D005912 ORTHO05D007329 6.3e-14 81.3 104 42.3
Gorai.003G004900 Gossypium raimondii HOM05D005912 ORTHO05D007329 8.3e-14 80.9 111 36.9
DCAR_011589 Daucus carota HOM05D005912 ORTHO05D007329 1.4e-13 80.1 62 59.7
Gohir.D03G004600 Gossypium hirsutum HOM05D005912 ORTHO05D007329 1.4e-13 80.1 111 36.9
Lj4A227T48 Lonicera japonica HOM05D005912 ORTHO05D007329 1.4e-13 80.1 102 43.1
THA.LOC104807519 Tarenaya hassleriana HOM05D005912 ORTHO05D007329 1.4e-13 80.1 53 58.5
Gohir.A02G175200 Gossypium hirsutum HOM05D005912 ORTHO05D007329 1.8e-13 79.7 111 36.9
Hma1.2p1_4017F.1_g338140 Hydrangea macrophylla HOM05D005912 ORTHO05D007329 1.8e-13 79.7 53 67.9
A01p02950 Brassica napus HOM05D005912 ORTHO05D007329 3.2e-13 79.0 62 56.5
BolC1t00315H Brassica oleracea HOM05D005912 ORTHO05D007329 3.2e-13 79.0 62 56.5
BraA01t00278Z Brassica rapa HOM05D005912 ORTHO05D007329 3.2e-13 79.0 62 56.5
ClCG01G020670 Citrullus lanatus HOM05D005912 ORTHO05D007329 3.2e-13 79.0 104 52.9
C01p03300 Brassica napus HOM05D005912 ORTHO05D007329 4.1e-13 78.6 62 56.5
Cpa.g.sc6.326 Carica papaya HOM05D005912 ORTHO05D007329 4.1e-13 78.6 55 61.8
MELO3C007950.2 Cucumis melo HOM05D005912 ORTHO05D007329 7.0e-13 77.8 52 63.5
SalBow3G0555 Salvia bowleyana HOM05D005912 ORTHO05D007329 7.0e-13 77.8 113 40.7
ATR0661G434 Amborella trichopoda HOM05D005912 ORTHO05D007329 9.2e-13 77.4 52 65.4
HPP92_022166 Vanilla planifolia HOM05D005912 ORTHO05D007329 1.2e-12 77.0 48 64.6
Thecc.01G010100 Theobroma cacao HOM05D005912 ORTHO05D007329 1.6e-12 76.6 52 61.5
TWI73G1263 Tripterygium wilfordii HOM05D005912 ORTHO05D007329 2.0e-12 76.3 55 63.6
Carub.0007s0449 Capsella rubella HOM05D005912 ORTHO05D007329 2.7e-12 75.9 52 57.7
CsaV3_6G047590 Cucumis sativus L. HOM05D005912 ORTHO05D007329 2.7e-12 75.9 105 51.4
ECA238G3446 Erigeron canadensis HOM05D005912 ORTHO05D007329 2.7e-12 75.9 104 47.1
Sp7g33520 Schrenkiella parvula HOM05D005912 ORTHO05D007329 2.7e-12 75.9 52 57.7
FvH4_1g10920 Fragaria vesca HOM05D005912 ORTHO05D007329 3.5e-12 75.5 105 41.9
FAN26G2135 Fragaria x ananassa HOM05D005912 ORTHO05D007329 3.5e-12 75.5 105 41.9
PSO541G6093 Papaver somniferum HOM05D005912 ORTHO05D007329 3.5e-12 75.5 52 63.5
FAN23G1227 Fragaria x ananassa HOM05D005912 ORTHO05D007329 4.5e-12 75.1 105 41.9
QL06p052316 Quercus lobata HOM05D005912 ORTHO05D007329 4.5e-12 75.1 47 70.2
CARHR244100 Cardamine hirsuta HOM05D005912 ORTHO05D007329 5.9e-12 74.7 52 57.7
CDE06G1293 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 5.9e-12 74.7 53 54.7
RcHm_v2.0_Chr2g0098181 Rosa chinensis HOM05D005912 ORTHO05D007329 7.8e-12 74.3 106 41.5
Thhalv10025477m.g Eutrema salsugineum HOM05D005912 ORTHO05D007329 1.3e-11 73.6 50 58.0
Zm00001eb002560 Zea mays HOM05D005912 ORTHO05D007329 1.3e-11 73.6 54 63.0
Aa31LG6G12710 Aethionema arabicum HOM05D005912 ORTHO05D007329 1.7e-11 73.2 52 55.8
EL10Ac5g11470 Beta vulgaris HOM05D005912 ORTHO05D007329 2.3e-11 72.8 52 59.6
A08p21710 Brassica napus HOM05D000088 ORTHO05D000933 2.9e-11 72.4 49 59.2
SGA_v2.0_scaffold108G30993 Striga asiatica HOM05D005912 ORTHO05D007329 2.9e-11 72.4 104 38.5
COL.COLO4_09868 Corchorus olitorius HOM05D005912 ORTHO05D007329 3.9e-11 72.0 108 37.0
Nn6g31870 Nelumbo nucifera HOM05D005912 ORTHO05D007329 3.9e-11 72.0 53 58.5
Os03g0131500 Oryza sativa ssp. japonica HOM05D005912 ORTHO05D007329 3.9e-11 72.0 54 57.4
Prupe.7G176300 Prunus persica HOM05D005912 ORTHO05D007329 3.9e-11 72.0 44 72.7
CDE03G0408 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 5.0e-11 71.6 53 52.8
Migut.H02191 Erythranthe guttata HOM05D005912 ORTHO05D007329 5.0e-11 71.6 99 42.4
Eucgr.J02496 Eucalyptus grandis HOM05D005912 ORTHO05D007329 5.0e-11 71.6 50 62.0
PSO675G2300 Papaver somniferum HOM05D005912 ORTHO05D007329 5.0e-11 71.6 52 61.5
BcaC01g00519 Brassica carinata HOM05D005912 ORTHO05D007329 6.6e-11 71.2 49 57.1
BcaNung05729 Brassica carinata HOM05D005912 ORTHO05D007329 6.6e-11 71.2 52 57.7
C03p80880 Brassica napus HOM05D000088 ORTHO05D000933 6.6e-11 71.2 49 57.1
Sed0007504 Sechium edule HOM05D005912 ORTHO05D007329 6.6e-11 71.2 52 55.8
Duzib147G0472 Durio zibethinus HOM05D005912 ORTHO05D007329 8.6e-11 70.9 52 59.6
AUR62033809 Chenopodium quinoa HOM05D005912 ORTHO05D007329 2.5e-10 69.3 44 65.9
VMungo1215G0927 Vigna mungo HOM05D005912 ORTHO05D007329 3.3e-10 68.9 57 56.1
Glyma.11G082400 Glycine max HOM05D005912 ORTHO05D007329 7.3e-10 67.8 55 56.4
Lj2g0008610 Lotus japonicus HOM05D005912 ORTHO05D007329 7.3e-10 67.8 50 60.0
MD02G1122300 Malus domestica HOM05D005912 ORTHO05D007329 7.3e-10 67.8 54 63.0
BolC3t20343H Brassica oleracea HOM05D000088 ORTHO05D000933 1.2e-09 67.0 49 55.1
Phvul.002G112700 Phaseolus vulgaris HOM05D005912 ORTHO05D007329 1.2e-09 67.0 62 50.0
Psat2g151360 Pisum sativum HOM05D005912 ORTHO05D007329 2.1e-09 66.2 50 58.0
arahy.Tifrunner.gnm1.ann1.JJKM7S Arachis hypogaea HOM05D005912 ORTHO05D007329 6.1e-09 64.7 46 58.7
arahy.Tifrunner.gnm1.ann1.TNL2KY Arachis hypogaea HOM05D005912 ORTHO05D007329 6.1e-09 64.7 46 58.7
arahy.Tifrunner.gnm1.ann1.SP2XL4 Arachis hypogaea HOM05D005912 ORTHO05D007329 8.0e-09 64.3 46 58.7
TPR.G25119 Trifolium pratense HOM05D005912 ORTHO05D007329 8.0e-09 64.3 50 54.0
Medtr5g023180 Medicago truncatula HOM05D005912 ORTHO05D007329 4.0e-08 62.0 50 50.0
Glyma.01G161400 Glycine max HOM05D005912 ORTHO05D007329 8.9e-08 60.8 38 71.1
Lalb_Chr05g0212091 Lupinus albus HOM05D005912 ORTHO05D007329 8.9e-08 60.8 50 52.0
SEGI_06824 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 8.9e-08 60.8 60 43.3
Ca_24951_v3 Cicer arietinum L. HOM05D005912 ORTHO05D007329 1.5e-07 60.1 46 54.3
Lj2A1074G31 Lonicera japonica HOM05D005912 ORTHO05D007329 1.5e-07 60.1 50 54.0
BraA08t34122Z Brassica rapa HOM05D005912 ORTHO05D007329 2.0e-07 59.7 39 61.5
AL7G15340 Arabidopsis lyrata HOM05D005912 ORTHO05D007329 5.8e-07 58.2 39 59.0
AT4G35760 Arabidopsis thaliana HOM05D005912 ORTHO05D007329 5.8e-07 58.2 39 59.0


User provided reference genes

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