Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_87.g28008 Utricularia gibba HOM05D002660 ORTHO05D003902 8.9e-173 610.1 303 100.0
SabraMtG0005500 Salix brachista HOM05D002660 ORTHO05D003902 5.7e-26 122.5 294 32.0
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 3.1e-24 116.7 120 47.5
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 3.4e-23 113.2 196 40.3
arahy.Tifrunner.gnm1.ann1.DD5JWP Arachis hypogaea HOM05D002660 ORTHO05D003902 7.6e-23 112.1 214 36.9
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 7.6e-23 112.1 204 37.3
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.8e-22 109.8 109 54.1
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.8e-22 109.8 109 54.1
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.8e-22 109.8 109 54.1
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.8e-22 109.8 109 54.1
Sopen00g006790 Solanum pennellii HOM05D002660 ORTHO05D003902 3.8e-22 109.8 109 54.1
BcaC05g26896 Brassica carinata HOM05D002660 ORTHO05D003902 5.0e-22 109.4 106 51.9
BcaC08g43707 Brassica carinata HOM05D002660 ORTHO05D003902 5.0e-22 109.4 106 51.9
BNapus_Darmor_BZH_scaffold_234p00270 Brassica napus HOM05D002660 ORTHO05D003902 5.0e-22 109.4 106 51.9
BolSC28t60340H Brassica oleracea HOM05D002660 ORTHO05D003902 5.0e-22 109.4 106 51.9
BraSC177t45771Z Brassica rapa HOM05D002660 ORTHO05D003902 5.0e-22 109.4 106 51.9
BraSC48t46265Z Brassica rapa HOM05D002660 ORTHO05D003902 5.0e-22 109.4 106 51.9
arahy.Tifrunner.gnm1.ann1.64IP8W Arachis hypogaea HOM05D002660 ORTHO05D003902 1.4e-21 107.8 213 38.0
arahy.Tifrunner.gnm1.ann1.MHP2RT Arachis hypogaea HOM05D002660 ORTHO05D003902 1.4e-21 107.8 213 38.0
BolC6t36210H Brassica oleracea HOM05D002660 ORTHO05D003902 1.4e-21 107.8 113 48.7
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 1.9e-21 107.5 151 44.4
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 1.9e-21 107.5 144 41.0
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 1.9e-21 107.5 151 44.4
arahy.Tifrunner.gnm1.ann1.RJKU2P Arachis hypogaea HOM05D002660 ORTHO05D003902 1.9e-21 107.5 214 36.9
RcHm_v2.0_MTg0498601 Rosa chinensis HOM05D002660 ORTHO05D003902 2.5e-21 107.1 133 44.4
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 3.2e-21 106.7 110 46.4
SGA_v2.0_scaffold420G51340 Striga asiatica HOM05D002660 ORTHO05D003902 3.2e-21 106.7 108 47.2
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea HOM05D002660 ORTHO05D003902 7.2e-21 105.5 110 50.0
Cpa.g.sc263.8 Carica papaya HOM05D002660 ORTHO05D003902 2.1e-20 104.0 106 51.9
arahy.Tifrunner.gnm1.ann1.4WR8AK Arachis hypogaea HOM05D002660 ORTHO05D003902 3.6e-20 103.2 118 50.8
Sed0005295 Sechium edule HOM05D002660 ORTHO05D003902 3.6e-20 103.2 137 46.0
SGA_v2.0_scaffold400G50856 Striga asiatica HOM05D002660 ORTHO05D003902 1.4e-19 101.3 122 49.2
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea HOM05D002660 ORTHO05D003902 6.7e-19 99.0 258 31.8
arahy.Tifrunner.gnm1.ann1.1F9GAV Arachis hypogaea HOM05D002660 ORTHO05D003902 8.8e-19 98.6 206 37.4
Solyc11g063530.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 8.8e-19 98.6 125 46.4
Aa31csc1168G10 Aethionema arabicum HOM05D002660 ORTHO05D003902 5.7e-18 95.9 107 46.7
CAN.G85.19 Capsicum annuum HOM05D002660 ORTHO05D003902 3.7e-17 93.2 100 52.0
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea HOM05D002660 ORTHO05D003902 6.3e-17 92.4 104 45.2
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea HOM05D002660 ORTHO05D003902 6.3e-17 92.4 104 45.2
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea HOM05D002660 ORTHO05D003902 6.3e-17 92.4 104 45.2
SGA_v2.0_scaffold255G45438 Striga asiatica HOM05D002660 ORTHO05D003902 8.2e-17 92.0 139 36.0
MBI14_g44092_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 1.8e-16 90.9 153 35.9
Sopen05g012700 Solanum pennellii HOM05D002660 ORTHO05D000001 3.1e-16 90.1 140 38.6
COL.COLO4_02507 Corchorus olitorius HOM05D002660 ORTHO05D003902 2.2e-14 84.0 98 48.0
COL.COLO4_04088 Corchorus olitorius HOM05D002660 ORTHO05D003902 3.2e-13 80.1 86 46.5
Lj2A1234T113 Lonicera japonica HOM05D002660 ORTHO05D003902 1.2e-12 78.2 91 45.1
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 1.6e-12 77.8 96 46.9
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 6.1e-12 75.9 56 62.5
Lj2P1228T81 Lonicera japonica HOM05D011380 ORTHO05D019448 1.0e-11 75.1 76 46.1
arahy.Tifrunner.gnm1.ann1.PGW3V5 Arachis hypogaea HOM05D002660 ORTHO05D003902 1.1e-10 71.6 57 63.2
arahy.Tifrunner.gnm1.ann1.UMNW15 Arachis hypogaea HOM05D002660 ORTHO05D003902 1.1e-10 71.6 57 63.2
SGA_v2.0_scaffold400G50852 Striga asiatica HOM05D000388 ORTHO05D000473 1.5e-10 71.2 114 36.8
ATR0575G001 Amborella trichopoda HOM05D002660 ORTHO05D003902 7.4e-10 68.9 53 58.5
BcaC05g27131 Brassica carinata HOM05D002660 ORTHO05D003902 1.3e-09 68.2 111 39.6
ATR0661G179 Amborella trichopoda HOM05D002660 ORTHO05D003902 2.2e-09 67.4 77 48.1
CARHR283370 Cardamine hirsuta HOM05D002660 ORTHO05D003902 2.2e-09 67.4 72 45.8
ATMG01110 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 2.8e-09 67.0 72 45.8
SGA_v2.0_scaffold507G52551 Striga asiatica HOM05D002660 ORTHO05D003902 4.8e-09 66.2 49 57.1
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 6.3e-09 65.9 59 54.2
MBI14_g38700_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 1.4e-08 64.7 134 35.1
SGA_v2.0_scaffold420G51422 Striga asiatica HOM05D002660 ORTHO05D019448 7.0e-08 62.4 56 55.4
arahy.Tifrunner.gnm1.ann1.FFDS4S Arachis hypogaea HOM05D002660 ORTHO05D003902 9.1e-08 62.0 99 38.4
Sed0020463 Sechium edule HOM05D002660 ORTHO05D003902 9.1e-08 62.0 83 38.6
arahy.Tifrunner.gnm1.ann1.2INJ5A Arachis hypogaea HOM05D002660 ORTHO05D003902 1.2e-07 61.6 110 36.4
CAN.G505.14 Capsicum annuum HOM05D000743 ORTHO05D000580 1.5e-07 61.2 76 44.7
Nn1g10106 Nelumbo nucifera HOM05D002660 ORTHO05D003902 2.6e-07 60.5 90 41.1
Nn1g10197 Nelumbo nucifera HOM05D002660 ORTHO05D003902 2.6e-07 60.5 90 41.1
CAN.G1109.11 Capsicum annuum HOM05D002660 ORTHO05D003902 3.4e-07 60.1 76 44.7
CAN.G1167.16 Capsicum annuum HOM05D002660 ORTHO05D003902 3.4e-07 60.1 76 44.7
MBI05_g05343_MAGBIO Magnolia biondii HOM05D000445 ORTHO05D000314 7.7e-07 58.9 69 40.6
AT2G07749 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 1.3e-06 58.2 66 42.4
GSVIVG01029663001 Vitis vinifera HOM05D002660 ORTHO05D003902 2.2e-06 57.4 73 41.1
CAN.G1.6 Capsicum annuum HOM05D002660 ORTHO05D003902 5.0e-06 56.2 76 43.4
MBI14_g38260_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 5.0e-06 56.2 134 32.1


User provided reference genes

Program Settings