Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_87.g27978 Utricularia gibba HOM05D000533 ORTHO05D011488 1.2e-67 259.6 121 100.0
CARHR287180 Cardamine hirsuta HOM05D000533 ORTHO05D011488 2.3e-31 139.0 80 85.0
Lsat_1_v5_gn_7_67841 Lactuca sativa HOM05D000533 ORTHO05D011488 2.3e-31 139.0 80 86.2
Aqoxy3G01142 Aquilegia oxysepala HOM05D000533 ORTHO05D011488 1.2e-30 136.7 80 85.0
CiPaw.12G057700 Carya illinoinensis HOM05D000533 ORTHO05D011488 2.0e-30 136.0 80 83.8
HanXRQChr10g0297221 Helianthus annuus HOM05D000533 ORTHO05D011488 4.9e-29 131.3 80 82.5
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 4.9e-29 131.3 77 84.4
arahy.Tifrunner.gnm1.ann1.20VADI Arachis hypogaea HOM05D000533 ORTHO05D011488 2.7e-27 125.6 72 83.3
arahy.Tifrunner.gnm1.ann1.2U5581 Arachis hypogaea HOM05D000533 ORTHO05D011488 2.7e-27 125.6 72 83.3
arahy.Tifrunner.gnm1.ann1.EH7RRY Arachis hypogaea HOM05D000533 ORTHO05D011488 2.7e-27 125.6 72 83.3
ATR0645G003 Amborella trichopoda HOM05D000533 ORTHO05D011488 3.5e-27 125.2 63 93.7
Lalb_Chr00c54g0413551 Lupinus albus HOM05D000533 ORTHO05D011488 3.5e-27 125.2 63 93.7
Lalb_Chr01g0010861 Lupinus albus HOM05D000533 ORTHO05D011488 5.9e-27 124.4 72 81.9
Cpa.g.sc263.10 Carica papaya HOM05D000533 ORTHO05D011488 2.3e-26 122.5 63 92.1
CsaV3_6G023980 Cucumis sativus L. HOM05D000533 ORTHO05D011488 2.3e-26 122.5 63 92.1
CsaV3_6G025260 Cucumis sativus L. HOM05D000533 ORTHO05D011488 2.3e-26 122.5 63 92.1
CsaV3_UNG208480 Cucumis sativus L. HOM05D000533 ORTHO05D011488 2.3e-26 122.5 63 92.1
RhsimMtG0002300 Rhododendron simsii HOM05D000533 ORTHO05D001069 3.9e-26 121.7 72 81.9
Phvul.011G124215 Phaseolus vulgaris HOM05D000533 ORTHO05D011488 5.0e-26 121.3 64 87.5
HanXRQChr14g0434371 Helianthus annuus HOM05D000533 ORTHO05D001069 1.5e-25 119.8 60 93.3
SabraMtG0006600 Salix brachista HOM05D000533 ORTHO05D001069 3.3e-25 118.6 75 77.3
Solyc00g500183.1 Solanum lycopersicum HOM05D000533 ORTHO05D011488 2.3e-23 112.5 56 91.1
Nn1g10104 Nelumbo nucifera HOM05D000533 ORTHO05D001069 4.4e-22 108.2 72 76.4
Lalb_Chr00c24g0407321 Lupinus albus HOM05D000533 ORTHO05D011488 2.2e-21 105.9 55 89.1
Hma1.2p1_0386F.1_g141700 Hydrangea macrophylla HOM05D000533 ORTHO05D001069 6.4e-21 104.4 55 89.1
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 2.4e-20 102.4 55 87.3
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 3.2e-20 102.1 55 87.3
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 1.7e-18 96.3 55 83.6
SHI36143 Sapria himalayana HOM05D000533 ORTHO05D011488 1.7e-18 96.3 55 83.6
Sp3g25570 Schrenkiella parvula HOM05D000533 ORTHO05D001069 1.7e-18 96.3 47 95.7
PGSC0003DMG400013204 Solanum tuberosum HOM05D000533 ORTHO05D011488 3.0e-18 95.5 55 83.6
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 5.0e-18 94.7 56 76.8
Sp5g20290 Schrenkiella parvula HOM05D000533 ORTHO05D011488 6.6e-18 94.4 62 75.8
Nitab4.5_0000859g0010 Nicotiana tabacum HOM05D000533 ORTHO05D011488 8.6e-18 94.0 58 77.6
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 1.9e-17 92.8 54 77.8
GSVIVG01004958001 Vitis vinifera HOM05D000533 ORTHO05D001069 2.5e-17 92.4 55 83.6
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 9.5e-17 90.5 48 89.6
Glyma.14G103300 Glycine max HOM05D000533 ORTHO05D001069 8.1e-16 87.4 47 85.1
GSVIVG01004967001 Vitis vinifera HOM05D000533 ORTHO05D011488 3.1e-15 85.5 55 80.0
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 4.0e-15 85.1 44 90.9
Phvul.009G072400 Phaseolus vulgaris HOM05D000533 ORTHO05D011488 5.2e-15 84.7 47 85.1
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 2.0e-14 82.8 48 81.2
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 2.2e-13 79.3 49 69.4
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 2.2e-13 79.3 47 80.9
Nitab4.5_0001034g0060 Nicotiana tabacum HOM05D000533 ORTHO05D011488 2.9e-13 79.0 58 70.7
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 3.7e-13 78.6 53 60.4
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 1.9e-12 76.3 54 63.0
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 3.2e-12 75.5 51 62.7
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 5.4e-12 74.7 50 66.0
SHI51311 Sapria himalayana HOM05D000533 ORTHO05D011488 5.4e-12 74.7 55 72.7
Nitab4.5_0015438g0010 Nicotiana tabacum HOM05D007877 ORTHO05D009957 6.6e-10 67.8 35 85.7
Peaxi162Scf00197g00046 Petunia axillaris HOM05D000533 ORTHO05D011488 6.6e-10 67.8 47 74.5
BolSC28t60428H Brassica oleracea HOM05D000533 ORTHO05D011488 3.6e-08 62.0 30 93.3
Pp3c7_10190 Physcomitrium patens HOM05D000533 ORTHO05D011488 3.6e-08 62.0 33 81.8
Mapoly0031s0086 Marchantia polymorpha HOM05D000533 ORTHO05D011488 1.8e-07 59.7 33 75.8
Mapoly0031s0085 Marchantia polymorpha HOM05D000533 ORTHO05D011488 3.1e-07 58.9 33 72.7
SHI35303 Sapria himalayana HOM05D011739 ORTHO05D012473 6.8e-07 57.8 45 62.2


User provided reference genes

Program Settings