Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_87.g27955 Utricularia gibba HOM05D008105 ORTHO05D010309 3.0e-72 275.0 133 100.0
DCAR_024277 Daucus carota HOM05D008105 ORTHO05D010309 1.8e-45 186.0 113 80.5
DCAR_031801 Daucus carota HOM05D008105 ORTHO05D010309 1.8e-45 186.0 113 80.5
Nn1g10137 Nelumbo nucifera HOM05D008105 ORTHO05D010309 4.5e-44 181.4 89 95.5
Lsat_1_v5_gn_7_25421 Lactuca sativa HOM05D008105 ORTHO05D010309 1.4e-42 176.4 93 91.4
Lsat_1_v5_gn_9_5080 Lactuca sativa HOM05D008105 ORTHO05D010309 1.4e-42 176.4 93 91.4
Nitab4.5_0012260g0030 Nicotiana tabacum HOM05D008105 ORTHO05D010309 2.5e-42 175.6 114 77.2
Lsat_1_v5_gn_7_101141 Lactuca sativa HOM05D008105 ORTHO05D010309 1.2e-41 173.3 88 93.2
Solyc10g048060.2 Solanum lycopersicum HOM05D008105 ORTHO05D010309 2.1e-41 172.6 110 77.3
PGSC0003DMG400019855 Solanum tuberosum HOM05D008105 ORTHO05D010309 2.1e-41 172.6 110 77.3
ECA039G0009 Erigeron canadensis HOM05D008105 ORTHO05D010309 4.7e-41 171.4 105 81.0
TPR.G40844 Trifolium pratense HOM05D008105 ORTHO05D010309 2.6e-39 165.6 93 84.9
Lsat_1_v5_gn_0_34941 Lactuca sativa HOM05D008105 ORTHO05D010309 4.4e-39 164.9 93 87.1
Lsat_1_v5_gn_3_92260 Lactuca sativa HOM05D008105 ORTHO05D010309 4.4e-39 164.9 93 87.1
Nitab4.5_0000886g0210 Nicotiana tabacum HOM05D008105 ORTHO05D010309 7.4e-39 164.1 113 73.5
Hma1.2p1_1191F.1_g265450 Hydrangea macrophylla HOM05D008105 ORTHO05D010309 5.0e-35 151.4 89 83.1
Lsat_1_v5_gn_5_16381 Lactuca sativa HOM05D008105 ORTHO05D010309 5.0e-35 151.4 93 81.7
ATMG00030 Arabidopsis thaliana HOM05D008105 ORTHO05D010309 6.5e-27 124.4 60 93.3
BNapus_Darmor_BZH_scaffold_234p00090 Brassica napus HOM05D008105 ORTHO05D010309 6.5e-27 124.4 60 93.3
CARHR282600 Cardamine hirsuta HOM05D008105 ORTHO05D010309 6.5e-27 124.4 60 93.3
arahy.Tifrunner.gnm1.ann1.CS557D Arachis hypogaea HOM05D008105 ORTHO05D010309 1.9e-26 122.9 60 91.7
ClCG02G013160 Citrullus lanatus HOM05D008105 ORTHO05D010309 2.5e-26 122.5 63 88.9
GSVIVG01013601001 Vitis vinifera HOM05D008105 ORTHO05D010309 2.5e-26 122.5 60 93.3
C04p19700 Brassica napus HOM05D008105 ORTHO05D010309 9.4e-26 120.6 60 90.0
Nitab4.5_0002095g0030 Nicotiana tabacum HOM05D008105 ORTHO05D010309 9.4e-26 120.6 113 59.3
Nitab4.5_0006089g0080 Nicotiana tabacum HOM05D008105 ORTHO05D010309 1.6e-25 119.8 62 91.9
CsaV3_UNG208290 Cucumis sativus L. HOM05D008105 ORTHO05D010309 3.6e-25 118.6 58 91.4
CsaV3_UNG208900 Cucumis sativus L. HOM05D008105 ORTHO05D010309 3.6e-25 118.6 58 91.4
Migut.I00280 Erythranthe guttata HOM05D008105 ORTHO05D010309 6.1e-25 117.9 64 84.4
Potri.007G062282 Populus trichocarpa HOM05D008105 ORTHO05D010309 1.8e-24 116.3 73 79.5
SHI53302 Sapria himalayana HOM05D008105 ORTHO05D010309 1.8e-24 116.3 56 92.9
Nitab4.5_0001607g0060 Nicotiana tabacum HOM05D008105 ORTHO05D010309 2.3e-24 115.9 110 59.1
Lsat_1_v5_gn_4_65960 Lactuca sativa HOM05D008105 ORTHO05D010309 1.2e-23 113.6 62 83.9
Nitab4.5_0002418g0140 Nicotiana tabacum HOM05D008105 ORTHO05D010309 2.0e-23 112.8 81 69.1
SHI46576 Sapria himalayana HOM05D008105 ORTHO05D010309 4.4e-23 111.7 56 87.5
SHI47522 Sapria himalayana HOM05D008105 ORTHO05D010309 4.4e-23 111.7 56 87.5
SHI54884 Sapria himalayana HOM05D008105 ORTHO05D010309 7.5e-23 110.9 56 89.3
TPR.G25507 Trifolium pratense HOM05D008105 ORTHO05D010309 6.3e-22 107.8 53 90.6
TPR.G23916 Trifolium pratense HOM05D008105 ORTHO05D010309 1.4e-21 106.7 53 90.6
Nitab4.5_0008578g0040 Nicotiana tabacum HOM05D008105 ORTHO05D010309 2.7e-20 102.4 62 83.9
Nitab4.5_0006806g0130 Nicotiana tabacum HOM05D008105 ORTHO05D010309 1.5e-18 96.7 63 77.8
SGA_v2.0_scaffold255G45599 Striga asiatica HOM05D008105 ORTHO05D010309 9.5e-18 94.0 47 89.4
DCAR_028367 Daucus carota HOM05D008105 ORTHO05D010309 8.9e-16 87.4 41 95.1
ClCG06G007950 Citrullus lanatus HOM05D008105 ORTHO05D010309 1.2e-15 87.0 50 82.0
SHI43693 Sapria himalayana HOM05D008105 ORTHO05D010309 2.8e-14 82.4 38 89.5
Lsat_1_v5_gn_1_61481 Lactuca sativa HOM05D008105 ORTHO05D010309 1.2e-12 77.0 45 88.9
SHI14716 Sapria himalayana HOM05D008105 ORTHO05D010309 1.9e-10 69.7 42 76.2
Nitab4.5_0000031g0160 Nicotiana tabacum HOM05D008105 ORTHO05D010309 2.5e-10 69.3 70 54.3
arahy.Tifrunner.gnm1.ann1.DTZ4L4 Arachis hypogaea HOM05D008105 ORTHO05D010309 3.3e-10 68.9 71 53.5
Nitab4.5_0011987g0030 Nicotiana tabacum HOM05D008105 ORTHO05D010309 3.3e-10 68.9 53 62.3
Dinv06662 Davidia involucrata HOM05D008105 ORTHO05D010309 4.3e-10 68.6 40 82.5
Dinv06742 Davidia involucrata HOM05D008105 ORTHO05D010309 4.3e-10 68.6 40 82.5
Mapoly0028s0112 Marchantia polymorpha HOM05D008105 ORTHO05D010309 5.6e-10 68.2 52 59.6
Gohir.D01G116732 Gossypium hirsutum HOM05D008105 ORTHO05D010309 7.3e-10 67.8 41 75.6
Nitab4.5_0000172g1030 Nicotiana tabacum HOM05D008105 ORTHO05D010309 7.3e-10 67.8 34 85.3
Migut.H01107 Erythranthe guttata HOM05D008105 ORTHO05D010309 1.0e-08 63.9 54 61.1
GSVIVG01014508001 Vitis vinifera HOM05D008105 ORTHO05D010309 6.8e-08 61.2 31 90.3
Medtr3g110480 Medicago truncatula HOM05D008105 ORTHO05D010309 4.4e-07 58.5 28 85.7
SHI10636 Sapria himalayana HOM05D008105 ORTHO05D010309 4.9e-06 55.1 32 75.0


User provided reference genes

Program Settings