Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_87.g27951 Utricularia gibba HOM05D008204 ORTHO05D010378 4.0e-57 224.6 114 100.0
arahy.Tifrunner.gnm1.ann1.13YUNC Arachis hypogaea HOM05D008204 ORTHO05D010378 2.9e-15 85.5 114 54.4
arahy.Tifrunner.gnm1.ann1.4CE1ET Arachis hypogaea HOM05D008204 ORTHO05D010378 2.9e-15 85.5 114 54.4
arahy.Tifrunner.gnm1.ann1.CN6S56 Arachis hypogaea HOM05D008204 ORTHO05D010378 2.9e-15 85.5 114 54.4
arahy.Tifrunner.gnm1.ann1.TNUC9A Arachis hypogaea HOM05D008204 ORTHO05D010378 2.9e-15 85.5 114 54.4
LjContig00439g0017375 Lotus japonicus HOM05D008204 ORTHO05D010378 3.8e-15 85.1 76 68.4
Lsat_1_v5_gn_0_35040 Lactuca sativa HOM05D008204 ORTHO05D010378 1.4e-14 83.2 50 94.0
Nn1g09977 Nelumbo nucifera HOM05D008204 ORTHO05D010378 1.4e-14 83.2 50 94.0
Nn1g10041 Nelumbo nucifera HOM05D008204 ORTHO05D010378 1.4e-14 83.2 50 94.0
Peaxi162Scf00651g00636 Petunia axillaris HOM05D007533 ORTHO05D009622 1.4e-14 83.2 50 94.0
Dinv06665 Davidia involucrata HOM05D008204 ORTHO05D010378 7.1e-14 80.9 50 92.0
Lsat_1_v5_gn_5_43061 Lactuca sativa HOM05D008204 ORTHO05D010378 7.1e-14 80.9 50 92.0
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 1.2e-13 80.1 68 73.5
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 1.2e-13 80.1 68 73.5
Ah.02g111570 Amaranthus hybridus HOM05D007533 ORTHO05D009622 2.7e-13 79.0 68 72.1
Ah.10g028140 Amaranthus hybridus HOM05D008204 ORTHO05D010378 3.5e-13 78.6 50 90.0
CAN.G2446.2 Capsicum annuum HOM05D008204 ORTHO05D010378 3.5e-13 78.6 45 97.8
CAN.G2792.2 Capsicum annuum HOM05D008204 ORTHO05D010378 3.5e-13 78.6 45 97.8
DCAR_032454 Daucus carota HOM05D008204 ORTHO05D010378 3.5e-13 78.6 45 97.8
HanXRQChr16g0504421 Helianthus annuus HOM05D008204 ORTHO05D010378 3.5e-13 78.6 45 97.8
HanXRQMTg0579141 Helianthus annuus HOM05D008204 ORTHO05D010378 3.5e-13 78.6 45 97.8
RcHm_v2.0_MTg0498341 Rosa chinensis HOM05D008204 ORTHO05D010378 3.5e-13 78.6 45 97.8
Lalb_Chr00c21g0405851 Lupinus albus HOM05D008204 ORTHO05D010378 4.6e-13 78.2 45 97.8
Lalb_Chr00c24g0407001 Lupinus albus HOM05D008204 ORTHO05D010378 4.6e-13 78.2 45 97.8
TPR.G39971 Trifolium pratense HOM05D008204 ORTHO05D010378 4.6e-13 78.2 45 97.8
Glyma.17G186100 Glycine max HOM05D008204 ORTHO05D010378 6.0e-13 77.8 45 95.6
FAN20G2339 Fragaria x ananassa HOM05D007533 ORTHO05D010378 1.0e-12 77.0 45 95.6
Nitab4.5_0010333g0030 Nicotiana tabacum HOM05D008204 ORTHO05D010378 1.3e-12 76.6 49 89.8
SabraMtG0004200 Salix brachista HOM05D007533 ORTHO05D009622 1.8e-12 76.3 55 81.8
SHI41393 Sapria himalayana HOM05D008204 ORTHO05D010378 3.0e-12 75.5 50 86.0
CDE02G0407 Ceratophyllum demersum HOM05D008466 ORTHO05D010817 6.7e-12 74.3 45 93.3
Aa31csc1168G40 Aethionema arabicum HOM05D008204 ORTHO05D010378 8.7e-12 73.9 45 93.3
Aqoxy12s023 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 8.7e-12 73.9 45 93.3
Aqoxy1G02968 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 8.7e-12 73.9 45 93.3
Aqoxy23s009 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 8.7e-12 73.9 45 93.3
ATMG00650 Arabidopsis thaliana HOM05D008204 ORTHO05D010378 8.7e-12 73.9 45 93.3
BolSC28t60309H Brassica oleracea HOM05D007533 ORTHO05D009622 8.7e-12 73.9 45 93.3
BolSC28t60365H Brassica oleracea HOM05D007533 ORTHO05D009622 8.7e-12 73.9 45 93.3
BraSC48t46233Z Brassica rapa HOM05D008204 ORTHO05D010378 8.7e-12 73.9 45 93.3
BraSC54t46364Z Brassica rapa HOM05D008204 ORTHO05D010378 8.7e-12 73.9 45 93.3
CARHR283010 Cardamine hirsuta HOM05D008204 ORTHO05D010378 8.7e-12 73.9 45 93.3
C01p34800 Brassica napus HOM05D008204 ORTHO05D010378 2.5e-11 72.4 45 91.1
BolC1t03448H Brassica oleracea HOM05D008204 ORTHO05D010378 2.5e-11 72.4 45 91.1
Thhalv10023053m.g Eutrema salsugineum HOM05D008204 ORTHO05D010378 2.5e-11 72.4 45 91.1
Nitab4.5_0012599g0060 Nicotiana tabacum HOM05D008204 ORTHO05D010378 3.3e-11 72.0 45 91.1
Potri.007G061661 Populus trichocarpa HOM05D008204 ORTHO05D010378 4.3e-11 71.6 45 91.1
Potri.007G062622 Populus trichocarpa HOM05D008204 ORTHO05D010378 4.3e-11 71.6 45 91.1
CANSAT16G0035 Cannabis sativa HOM05D008204 ORTHO05D010378 5.6e-11 71.2 45 91.1
PSO764G0230 Papaver somniferum HOM05D017042 ORTHO05D018469 5.6e-11 71.2 45 88.9
Sed0011989 Sechium edule HOM05D008204 ORTHO05D010378 5.6e-11 71.2 45 91.1
Sed0024014 Sechium edule HOM05D008204 ORTHO05D010378 5.6e-11 71.2 45 91.1
HanXRQChr07g0188981 Helianthus annuus HOM05D008204 ORTHO05D010378 7.4e-11 70.9 43 95.3
SEGI_24171 Sequoiadendron giganteum HOM05D008204 ORTHO05D010378 5.3e-09 64.7 45 82.2
Nitab4.5_0000172g1780 Nicotiana tabacum HOM05D008204 ORTHO05D010378 1.5e-08 63.2 43 83.7
Gorai.001G160700 Gossypium raimondii HOM05D008204 ORTHO05D010378 2.0e-08 62.8 56 73.2
Peaxi162Scf01098g00002 Petunia axillaris HOM05D007533 ORTHO05D009622 2.0e-08 62.8 73 57.5
ClCG06G013560 Citrullus lanatus HOM05D005029 ORTHO05D006052 4.5e-08 61.6 42 83.3
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 4.5e-08 61.6 55 69.1
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 4.5e-08 61.6 55 69.1
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 1.1e-06 57.0 34 94.1
Mapoly0002s0163 Marchantia polymorpha HOM05D008204 ORTHO05D010378 1.4e-06 56.6 38 84.2
Oeu013685.1 Olea europaea HOM05D008204 ORTHO05D010378 1.4e-06 56.6 34 88.2
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 3.2e-06 55.5 32 96.9
BraSC48t46321Z Brassica rapa HOM05D008204 ORTHO05D010378 4.2e-06 55.1 33 93.9


User provided reference genes

Program Settings