Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_87.g27938 Utricularia gibba HOM05D005210 ORTHO05D010286 4.7e-61 237.7 119 100.0
AUR62042343 Chenopodium quinoa HOM05D005210 ORTHO05D010286 6.3e-21 104.4 66 78.8
AUR62043906 Chenopodium quinoa HOM05D005210 ORTHO05D010286 6.3e-21 104.4 66 78.8
Lj2P1229T95 Lonicera japonica HOM05D005210 ORTHO05D010286 1.1e-20 103.6 66 80.3
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea HOM05D005210 ORTHO05D010080 4.1e-20 101.7 66 78.8
EL10Ac6g14456 Beta vulgaris HOM05D005210 ORTHO05D010286 5.3e-20 101.3 66 77.3
Actinidia34888 Actinidia chinensis HOM05D005210 ORTHO05D010080 6.9e-20 100.9 66 78.8
Hma1.2p1_0066F.1_g036150 Hydrangea macrophylla HOM05D005210 ORTHO05D010286 9.0e-20 100.5 66 78.8
Peaxi162Scf00489g00022 Petunia axillaris HOM05D005210 ORTHO05D011782 9.0e-20 100.5 62 80.6
RhsimMtG0002800 Rhododendron simsii HOM05D002864 ORTHO05D008485 9.0e-20 100.5 66 78.8
Solyc00g025290.1 Solanum lycopersicum HOM05D005210 ORTHO05D010286 9.0e-20 100.5 62 80.6
PGSC0003DMG400041193 Solanum tuberosum HOM05D005210 ORTHO05D010286 9.0e-20 100.5 62 80.6
Cfa021370 Carpinus fangiana HOM05D002864 ORTHO05D008485 2.0e-19 99.4 66 77.3
Dinv06682 Davidia involucrata HOM05D005210 ORTHO05D010080 2.0e-19 99.4 66 77.3
RcHm_v2.0_Chr7g0235961 Rosa chinensis HOM05D005210 ORTHO05D010286 2.0e-19 99.4 66 77.3
RcHm_v2.0_MTg0499091 Rosa chinensis HOM05D005210 ORTHO05D010286 2.0e-19 99.4 66 77.3
CAN.G85.24 Capsicum annuum HOM05D005210 ORTHO05D010286 4.5e-19 98.2 59 83.1
SabraMtG0001200 Salix brachista HOM05D005210 ORTHO05D010286 7.7e-19 97.4 68 75.0
Ah.10g028400 Amaranthus hybridus HOM05D005210 ORTHO05D010286 2.9e-18 95.5 66 74.2
Sopen11g014320 Solanum pennellii HOM05D005210 ORTHO05D010286 5.0e-18 94.7 66 72.7
SalBow1G3053 Salvia bowleyana HOM05D005210 ORTHO05D010286 8.5e-18 94.0 66 75.8
Nitab4.5_0007225g0020 Nicotiana tabacum HOM05D005210 ORTHO05D010286 4.2e-17 91.7 62 74.2
CAN.G1.5 Capsicum annuum HOM05D005210 ORTHO05D010286 7.9e-16 87.4 62 72.6
ClCG09G013030 Citrullus lanatus HOM05D005210 ORTHO05D010286 7.9e-16 87.4 66 69.7
FAN17G0417 Fragaria x ananassa HOM05D005210 ORTHO05D010286 3.4e-11 72.0 61 63.9
HanXRQChr14g0460771 Helianthus annuus HOM05D005210 ORTHO05D010286 1.1e-09 67.0 37 89.2
HanXRQMTg0579401 Helianthus annuus HOM05D005210 ORTHO05D010286 1.1e-09 67.0 37 89.2
CARHR283020 Cardamine hirsuta HOM05D005210 ORTHO05D010286 1.2e-08 63.5 42 76.2
ATMG00660 Arabidopsis thaliana HOM05D005210 ORTHO05D010286 1.6e-08 63.2 42 76.2
SHI11895 Sapria himalayana HOM05D005210 ORTHO05D010286 1.1e-06 57.0 82 43.9
Oeu002130.1 Olea europaea HOM05D005210 ORTHO05D010286 9.7e-06 53.9 50 56.0


User provided reference genes

Program Settings