Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 4.0e-251 870.9 429 100.0
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 4.3e-72 276.2 391 47.6
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 6.9e-70 268.9 305 54.8
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 5.1e-65 252.7 263 58.2
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 4.3e-64 249.6 254 57.5
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 5.0e-60 236.1 249 59.0
TPR.G40481 Trifolium pratense HOM05D002965 ORTHO05D010183 1.9e-59 234.2 120 94.2
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.7e-58 230.3 221 60.6
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 1.4e-57 228.0 214 63.1
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 1.0e-52 211.8 253 53.0
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 2.4e-46 190.7 129 76.0
LjContig00315g0010995 Lotus japonicus HOM05D002965 ORTHO05D010183 3.1e-46 190.3 103 93.2
CsaV3_UNG209220 Cucumis sativus L. HOM05D002965 ORTHO05D010183 7.0e-46 189.1 99 93.9
Medtr0082s0280 Medicago truncatula HOM05D002965 ORTHO05D010183 7.0e-46 189.1 99 93.9
Hma1.2p1_1338F.1_g276549 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 9.1e-46 188.7 99 93.9
Hma1.2p1_1338F.1_g276560 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 9.1e-46 188.7 99 93.9
Actinidia10888 Actinidia chinensis HOM05D002965 ORTHO05D010183 1.6e-45 188.0 99 93.9
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 2.6e-45 187.2 125 78.4
Ca_28560_v3 Cicer arietinum L. HOM05D002965 ORTHO05D010536 5.9e-45 186.0 149 67.8
Cpa.g.sc263.23 Carica papaya HOM05D002965 ORTHO05D010183 1.7e-44 184.5 99 91.9
SalBow1G8555 Salvia bowleyana HOM05D002965 ORTHO05D010183 5.0e-44 183.0 99 91.9
QL05p039661 Quercus lobata HOM05D002965 ORTHO05D010183 8.5e-44 182.2 99 90.9
arahy.Tifrunner.gnm1.ann1.CG3D8R Arachis hypogaea HOM05D002965 ORTHO05D010183 2.5e-43 180.6 98 91.8
arahy.Tifrunner.gnm1.ann1.EP7E6M Arachis hypogaea HOM05D002965 ORTHO05D010183 2.5e-43 180.6 98 91.8
arahy.Tifrunner.gnm1.ann1.I1QAK6 Arachis hypogaea HOM05D002965 ORTHO05D010183 2.5e-43 180.6 98 91.8
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 3.2e-43 180.3 97 92.8
Nitab4.5_0005613g0040 Nicotiana tabacum HOM05D002965 ORTHO05D010183 3.6e-42 176.8 101 87.1
Nitab4.5_0002418g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 8.0e-42 175.6 202 53.0
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 9.8e-40 168.7 275 45.8
Hma1.2p1_0204F.1_g086870 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 6.3e-39 166.0 97 84.5
Sp3g25630 Schrenkiella parvula HOM05D002965 ORTHO05D010183 1.1e-38 165.2 89 92.1
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 1.2e-37 161.8 311 37.3
HanXRQChr08g0212281 Helianthus annuus HOM05D002965 ORTHO05D010183 3.6e-34 150.2 90 85.6
HanXRQMTg0579441 Helianthus annuus HOM05D002965 ORTHO05D010183 3.6e-34 150.2 90 85.6
RcHm_v2.0_MTg0499241 Rosa chinensis HOM05D002965 ORTHO05D010183 1.0e-33 148.7 80 92.5
Peaxi162Scf00863g00003 Petunia axillaris HOM05D002965 ORTHO05D011068 2.3e-33 147.5 85 83.5
Cpa.g.sc263.24 Carica papaya HOM05D002965 ORTHO05D011068 3.0e-33 147.1 85 83.5
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 6.8e-33 146.0 147 57.1
Medtr5g040110 Medicago truncatula HOM05D002965 ORTHO05D010183 8.8e-33 145.6 80 91.2
Potri.007G061981 Populus trichocarpa HOM05D002965 ORTHO05D010183 8.8e-33 145.6 80 91.2
Lsat_1_v5_gn_4_66041 Lactuca sativa HOM05D002965 ORTHO05D010183 1.2e-32 145.2 80 91.2
Peaxi162Scf00197g00037 Petunia axillaris HOM05D002965 ORTHO05D010183 2.0e-32 144.4 163 54.6
Aqoxy1G02687 Aquilegia oxysepala HOM05D002965 ORTHO05D010183 4.4e-32 143.3 80 90.0
CDE02G3239 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 2.2e-31 141.0 88 81.8
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 2.8e-31 140.6 285 38.9
SHI48910 Sapria himalayana HOM05D002965 ORTHO05D010183 1.1e-30 138.7 78 88.5
MELO3C031425.2 Cucumis melo HOM05D002965 ORTHO05D010183 1.8e-30 137.9 83 80.7
Nitab4.5_0002558g0110 Nicotiana tabacum HOM05D002965 ORTHO05D011068 2.4e-30 137.5 85 77.6
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 3.1e-30 137.1 215 43.7
Nitab4.5_0001796g0200 Nicotiana tabacum HOM05D002965 ORTHO05D011068 1.2e-29 135.2 79 81.0
ATMG01120 Arabidopsis thaliana HOM05D002965 ORTHO05D010183 1.5e-27 128.3 64 96.9
Hma1.2p1_0000F.1_g000060 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 7.2e-27 125.9 75 81.3
Psat6g191080 Pisum sativum HOM05D002965 ORTHO05D010183 1.6e-26 124.8 67 88.1
Sopen06g007640 Solanum pennellii HOM05D002965 ORTHO05D012151 1.6e-26 124.8 82 75.6
Aa31csc822G20 Aethionema arabicum HOM05D002965 ORTHO05D011068 2.1e-26 124.4 124 58.9
Solyc00g118690.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 5.2e-25 119.8 86 75.6
Hma1.2p1_0713F.1_g207720 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.6e-24 117.5 66 90.9
BraSC48t46251Z Brassica rapa HOM05D002965 ORTHO05D010183 7.5e-24 115.9 74 83.8
ECA246G1890 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-23 115.2 81 69.1
CAN.G390.19 Capsicum annuum HOM05D002965 ORTHO05D010183 2.9e-23 114.0 72 83.3
BNapus_Darmor_BZH_scaffold_234p00020 Brassica napus HOM05D002965 ORTHO05D010183 3.7e-23 113.6 63 90.5
BolSC28t60382H Brassica oleracea HOM05D002965 ORTHO05D010183 3.7e-23 113.6 63 90.5
BolSC28t60415H Brassica oleracea HOM05D002965 ORTHO05D010183 3.7e-23 113.6 63 90.5
BraSC177t45752Z Brassica rapa HOM05D002965 ORTHO05D010183 3.7e-23 113.6 63 90.5
Sopen05g007970 Solanum pennellii HOM05D002965 ORTHO05D010183 7.0e-22 109.4 55 94.5
Lalb_Chr00c21g0405781 Lupinus albus HOM05D002965 ORTHO05D010183 9.2e-22 109.0 54 98.1
Solyc10g018950.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 2.7e-21 107.5 185 40.0
Nitab4.5_0001796g0410 Nicotiana tabacum HOM05D002965 ORTHO05D010183 4.6e-21 106.7 58 89.7
ECA039G0012 Erigeron canadensis HOM05D002965 ORTHO05D010183 1.3e-20 105.1 107 57.9
CAN.G1061.19 Capsicum annuum HOM05D002965 ORTHO05D010183 5.0e-20 103.2 55 92.7
CAN.G285.11 Capsicum annuum HOM05D002965 ORTHO05D010183 5.0e-20 103.2 55 92.7
VMungo0647G1384 Vigna mungo HOM05D002965 ORTHO05D010183 7.3e-19 99.4 55 89.1
SMO053G0011 Selaginella moellendorffii HOM05D002965 ORTHO05D010183 9.5e-19 99.0 68 67.6
Nitab4.5_0002558g0140 Nicotiana tabacum HOM05D002965 ORTHO05D010183 4.7e-18 96.7 56 85.7
QL02p008127 Quercus lobata HOM05D003783 ORTHO05D004568 1.8e-17 94.7 129 46.5
Nitab4.5_0005613g0030 Nicotiana tabacum HOM05D002965 ORTHO05D011068 2.3e-17 94.4 58 75.9
Nitab4.5_0000580g0190 Nicotiana tabacum HOM05D002965 ORTHO05D011068 2.0e-16 91.3 56 78.6
Mapoly0013s0013 Marchantia polymorpha HOM05D002965 ORTHO05D010183 5.8e-16 89.7 65 64.6
Peaxi162Scf02014g00001 Petunia axillaris HOM05D016050 ORTHO05D011068 6.4e-15 86.3 55 76.4
Ah.04g159760 Amaranthus hybridus HOM05D003103 ORTHO05D011068 2.7e-13 80.9 83 61.4
CSS0026545 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D010183 3.5e-13 80.5 62 69.4
Nitab4.5_0002653g0030 Nicotiana tabacum HOM05D002965 ORTHO05D011068 2.3e-12 77.8 63 65.1
SHI41349 Sapria himalayana HOM05D037518 ORTHO05D010183 5.0e-12 76.6 109 43.1
CDE02G2102 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 1.2e-10 72.0 47 76.6
Nitab4.5_0001763g0110 Nicotiana tabacum HOM05D002965 ORTHO05D011068 1.2e-10 72.0 41 82.9
CAN.G1542.11 Capsicum annuum HOM05D002965 ORTHO05D011068 4.7e-10 70.1 80 52.5
BolC7t41501H Brassica oleracea HOM05D002965 ORTHO05D010183 1.4e-09 68.6 36 88.9
CsaV3_UNG209190 Cucumis sativus L. HOM05D016050 ORTHO05D011068 2.3e-09 67.8 47 70.2
SHI29064 Sapria himalayana HOM05D002965 ORTHO05D010183 3.1e-09 67.4 58 60.3
Dinv34203 Davidia involucrata HOM05D002965 ORTHO05D010183 8.9e-09 65.9 54 66.7
ClCG01G010190 Citrullus lanatus HOM05D042035 ORTHO05D016641 3.4e-08 63.9 41 73.2
SHI27034 Sapria himalayana HOM05D023343 ORTHO05D011068 1.3e-07 62.0 39 71.8
Haze_08129 Corylus avellana HOM05D000001 ORTHO05D000003 1.4e-06 58.5 39 64.1
Nitab4.5_0000886g0150 Nicotiana tabacum HOM05D002965 ORTHO05D011068 7.1e-06 56.2 42 66.7


User provided reference genes

Program Settings