Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_87.g27923 Utricularia gibba HOM05D003430 ORTHO05D004809 2.6e-94 348.6 163 100.0
Solyc00g052430.2 Solanum lycopersicum HOM05D003430 ORTHO05D004809 3.2e-84 315.1 165 90.3
Solyc00g500224.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 3.2e-84 315.1 165 90.3
Solyc00g500241.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 3.2e-84 315.1 165 90.3
Peaxi162Scf00456g00037 Petunia axillaris HOM05D003430 ORTHO05D004809 5.5e-84 314.3 165 90.3
RcHm_v2.0_MTg0498431 Rosa chinensis HOM05D003430 ORTHO05D004809 2.7e-83 312.0 164 90.2
SabraMtG0000300 Salix brachista HOM05D003430 ORTHO05D004809 2.5e-81 305.4 163 89.6
ATMG00180 Arabidopsis thaliana HOM05D003430 ORTHO05D004809 2.8e-80 302.0 164 87.8
DCAR_032431 Daucus carota HOM05D003430 ORTHO05D004809 6.2e-80 300.8 164 87.8
LjContig00439g0009782 Lotus japonicus HOM05D003430 ORTHO05D004809 6.2e-80 300.8 164 87.2
Aa31csc1081G20 Aethionema arabicum HOM05D003430 ORTHO05D004809 1.4e-79 299.7 164 87.2
CARHR282710 Cardamine hirsuta HOM05D003430 ORTHO05D004809 1.8e-79 299.3 164 87.2
CARHR288640 Cardamine hirsuta HOM05D003430 ORTHO05D004809 1.8e-79 299.3 164 87.2
Sc11g0004440 Simmondsia chinensis HOM05D003430 ORTHO05D004809 1.8e-79 299.3 164 87.2
Ah.10g028080 Amaranthus hybridus HOM05D003430 ORTHO05D004809 2.4e-79 298.9 165 87.3
CANSAT16G0003 Cannabis sativa HOM05D003430 ORTHO05D004809 4.0e-79 298.1 164 87.8
Medtr0082s0260 Medicago truncatula HOM05D003430 ORTHO05D004809 9.0e-79 297.0 164 86.0
A04p09460 Brassica napus HOM05D003430 ORTHO05D004809 1.2e-78 296.6 164 86.6
BolSC28t60376H Brassica oleracea HOM05D003430 ORTHO05D004809 1.2e-78 296.6 164 86.6
BraSC177t45748Z Brassica rapa HOM05D003430 ORTHO05D004809 1.2e-78 296.6 164 86.6
BraSC48t46245Z Brassica rapa HOM05D003430 ORTHO05D004809 1.2e-78 296.6 164 86.6
BraSC54t46373Z Brassica rapa HOM05D003430 ORTHO05D004809 1.2e-78 296.6 164 86.6
Lalb_Chr00c21g0406111 Lupinus albus HOM05D003430 ORTHO05D004809 1.5e-78 296.2 164 86.6
Lalb_Chr00c39g0409061 Lupinus albus HOM05D003430 ORTHO05D004809 1.5e-78 296.2 164 86.6
Lalb_Chr00c39g0409241 Lupinus albus HOM05D003430 ORTHO05D004809 1.5e-78 296.2 164 86.6
Lalb_Chr00c51g0413151 Lupinus albus HOM05D003430 ORTHO05D004809 1.5e-78 296.2 164 86.6
MBI05_g40995_MAGBIO Magnolia biondii HOM05D003430 ORTHO05D004809 5.8e-78 294.3 167 85.6
arahy.Tifrunner.gnm1.ann1.13LUN9 Arachis hypogaea HOM05D003430 ORTHO05D004809 1.0e-77 293.5 164 86.0
arahy.Tifrunner.gnm1.ann1.2J3QCS Arachis hypogaea HOM05D003430 ORTHO05D004809 1.0e-77 293.5 164 86.0
arahy.Tifrunner.gnm1.ann1.4C4WEU Arachis hypogaea HOM05D003430 ORTHO05D004809 1.0e-77 293.5 164 86.0
HanXRQChr00c0055g0571401 Helianthus annuus HOM05D003430 ORTHO05D004809 2.2e-77 292.4 164 84.1
HanXRQMTg0579531 Helianthus annuus HOM05D003430 ORTHO05D004809 2.2e-77 292.4 164 84.1
SGA_v2.0_scaffold245G44667 Striga asiatica HOM05D003430 ORTHO05D004809 1.9e-76 289.3 165 86.1
Nitab4.5_0003945g0010 Nicotiana tabacum HOM05D003430 ORTHO05D004809 1.2e-75 286.6 165 83.0
Medtr0024s0150 Medicago truncatula HOM05D003430 ORTHO05D004809 3.5e-75 285.0 162 83.3
ATR0559G258 Amborella trichopoda HOM05D003430 ORTHO05D004809 2.3e-74 282.3 164 83.5
Gohir.D01G116901 Gossypium hirsutum HOM05D003430 ORTHO05D004809 5.1e-74 281.2 162 83.3
Nitab4.5_0001127g0210 Nicotiana tabacum HOM05D003430 ORTHO05D004809 1.1e-73 280.0 164 81.7
HanXRQChr11g0335431 Helianthus annuus HOM05D003430 ORTHO05D004809 9.7e-73 276.9 162 81.5
Cfa023013 Carpinus fangiana HOM05D003430 ORTHO05D004809 5.3e-71 271.2 143 88.8
SHI29635 Sapria himalayana HOM05D003430 ORTHO05D004809 1.2e-70 270.0 151 86.8
Zm00001eb435490 Zea mays HOM05D003430 ORTHO05D004809 6.5e-69 264.2 164 78.7
Zm00001eb436080 Zea mays HOM05D003430 ORTHO05D004809 6.5e-69 264.2 164 78.7
Sp3g25660 Schrenkiella parvula HOM05D003430 ORTHO05D004809 4.6e-67 258.1 164 78.7
Cpa.g.c41010 Carica papaya HOM05D003430 ORTHO05D004809 2.3e-66 255.8 164 77.4
Lj2C1222T70 Lonicera japonica HOM05D003430 ORTHO05D004809 2.5e-65 252.3 145 83.4
BraSC77t46628Z Brassica rapa HOM05D003430 ORTHO05D004809 2.4e-63 245.7 146 80.8
LjContig00446g0005008 Lotus japonicus HOM05D003430 ORTHO05D004809 1.5e-62 243.0 164 74.4
Dinv06724 Davidia involucrata HOM05D003430 ORTHO05D004809 6.5e-61 237.7 124 89.5
Lj2C1222T53 Lonicera japonica HOM05D003430 ORTHO05D004809 1.6e-59 233.0 124 87.9
Gorai.001G162300 Gossypium raimondii HOM05D003430 ORTHO05D004809 1.4e-58 229.9 124 87.1
VMungo0044G0003 Vigna mungo HOM05D003430 ORTHO05D004809 3.7e-56 221.9 141 77.3
arahy.Tifrunner.gnm1.ann1.Y9E1XU Arachis hypogaea HOM05D003430 ORTHO05D004809 4.8e-56 221.5 124 83.9
arahy.Tifrunner.gnm1.ann1.ZQA7LX Arachis hypogaea HOM05D003430 ORTHO05D004809 4.8e-56 221.5 124 83.9
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 8.2e-56 220.7 123 84.6
CDE02G3943 Ceratophyllum demersum HOM05D003430 ORTHO05D004809 1.3e-53 213.4 126 81.7
ECA039G0023 Erigeron canadensis HOM05D003430 ORTHO05D004809 1.3e-53 213.4 154 67.5
Ah.01g011780 Amaranthus hybridus HOM05D003430 ORTHO05D004809 1.7e-53 213.0 123 82.9
SHI42478 Sapria himalayana HOM05D003430 ORTHO05D004809 7.2e-52 207.6 121 83.5
Aqoxy23s002 Aquilegia oxysepala HOM05D003430 ORTHO05D004809 2.7e-51 205.7 129 81.4
Peaxi162Scf00456g00036 Petunia axillaris HOM05D003430 ORTHO05D004809 3.6e-51 205.3 111 88.3
Solyc10g076630.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 8.0e-51 204.1 109 84.4
Thhalv10002931m.g Eutrema salsugineum HOM05D003430 ORTHO05D004809 3.9e-50 201.8 162 65.4
Gorai.002G142200 Gossypium raimondii HOM05D003430 ORTHO05D004809 3.9e-50 201.8 144 70.1
Lj6g0002337 Lotus japonicus HOM05D003430 ORTHO05D004809 4.1e-47 191.8 114 79.8
Pp3c4_28970 Physcomitrium patens HOM05D003430 ORTHO05D004809 7.0e-47 191.0 179 60.9
Pp3c4_28972 Physcomitrium patens HOM05D003430 ORTHO05D004809 7.0e-47 191.0 179 60.9
Nitab4.5_0001152g0350 Nicotiana tabacum HOM05D003430 ORTHO05D004809 5.9e-46 188.0 116 79.3
TPR.G13784 Trifolium pratense HOM05D003430 ORTHO05D004809 3.2e-44 182.2 101 83.2
HanXRQChr09g0250621 Helianthus annuus HOM05D003430 ORTHO05D004809 5.5e-44 181.4 105 78.1
BolSC28t60410H Brassica oleracea HOM05D003430 ORTHO05D004809 7.5e-33 144.4 113 61.9
Nitab4.5_0000172g1130 Nicotiana tabacum HOM05D003430 ORTHO05D004809 6.6e-29 131.3 65 89.2
SHI20518 Sapria himalayana HOM05D003430 ORTHO05D004809 3.6e-27 125.6 131 54.2
Solyc05g025700.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 4.1e-23 112.1 107 57.9
SHI04802 Sapria himalayana HOM05D003430 ORTHO05D004809 2.3e-21 106.3 64 81.2
SHI03773 Sapria himalayana HOM05D003430 ORTHO05D004809 5.6e-20 101.7 77 63.6
SHI25675 Sapria himalayana HOM05D003430 ORTHO05D004809 2.9e-16 89.4 52 75.0
Solyc03g013370.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 4.6e-14 82.0 54 72.2
TPR.G22979 Trifolium pratense HOM05D000681 ORTHO05D007906 1.0e-13 80.9 42 88.1
Lalb_Chr21g0308991 Lupinus albus HOM05D002109 ORTHO05D002149 6.6e-13 78.2 47 78.7
SGA_v2.0_scaffold178G39492 Striga asiatica HOM05D003430 ORTHO05D004809 1.6e-11 73.6 44 75.0
SHI33657 Sapria himalayana HOM05D003430 ORTHO05D004809 2.1e-11 73.2 159 33.3
Mapoly0017s0010 Marchantia polymorpha HOM05D003430 ORTHO05D004809 3.6e-11 72.4 59 66.1
Nitab4.5_0000172g1190 Nicotiana tabacum HOM05D003430 ORTHO05D004809 3.6e-11 72.4 40 87.5
Nitab4.5_0000684g0110 Nicotiana tabacum HOM05D003430 ORTHO05D015169 6.8e-10 68.2 47 68.1
Prupe.5G026600 Prunus persica HOM05D003430 ORTHO05D004809 2.6e-09 66.2 68 54.4
SHI32119 Sapria himalayana HOM05D003430 ORTHO05D004809 3.4e-09 65.9 64 56.2


User provided reference genes

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