Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g48227_MAGBIO Magnolia biondii HOM05D007952 ORTHO05D009823 1.4e-40 169.1 82 100.0
Peaxi162Scf00987g00215 Petunia axillaris HOM05D007952 ORTHO05D009823 1.4e-40 169.1 82 100.0
unitig_87.g27919 Utricularia gibba HOM05D007952 ORTHO05D009823 1.4e-40 169.1 82 100.0
unitig_87.g28035 Utricularia gibba HOM05D007952 ORTHO05D009823 1.4e-40 169.1 82 100.0
unitig_91.g26519 Utricularia gibba HOM05D007952 ORTHO05D009823 1.4e-40 169.1 82 100.0
EL10As10g23962 Beta vulgaris HOM05D007952 ORTHO05D009823 3.5e-39 164.5 82 98.8
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 5.1e-38 160.6 76 100.0
Lsat_1_v5_gn_4_99801 Lactuca sativa HOM05D007952 ORTHO05D009823 5.6e-37 157.1 81 95.1
PGSC0003DMG400028997 Solanum tuberosum HOM05D007952 ORTHO05D009823 5.6e-37 157.1 81 95.1
PGSC0003DMG400035391 Solanum tuberosum HOM05D007952 ORTHO05D009823 5.6e-37 157.1 81 95.1
Nn5g29057 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.1e-36 155.2 81 93.8
Oeu020621.1 Olea europaea HOM05D007952 ORTHO05D009823 1.4e-35 152.5 81 91.4
Migut.D01400 Erythranthe guttata HOM05D007952 ORTHO05D009823 3.1e-35 151.4 72 100.0
CSS0039937 Camellia sinensis var. sinensis HOM05D007952 ORTHO05D009823 5.3e-35 150.6 74 97.3
Medtr0002s0270 Medicago truncatula HOM05D007952 ORTHO05D009823 5.3e-35 150.6 81 91.4
Sc01g0006530 Simmondsia chinensis HOM05D007952 ORTHO05D009823 6.9e-35 150.2 81 91.4
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 9.0e-35 149.8 80 90.0
Nn029s41587 Nelumbo nucifera HOM05D007952 ORTHO05D009823 9.0e-35 149.8 74 97.3
Nn064s42224 Nelumbo nucifera HOM05D007952 ORTHO05D009823 9.0e-35 149.8 74 97.3
Nn206s45068 Nelumbo nucifera HOM05D007952 ORTHO05D009823 9.0e-35 149.8 74 97.3
Nn219s45283 Nelumbo nucifera HOM05D007952 ORTHO05D009823 9.0e-35 149.8 74 97.3
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.2e-34 149.4 78 92.3
Lj2C1239G84 Lonicera japonica HOM05D007952 ORTHO05D009823 3.4e-34 147.9 73 98.6
Atru.chr9.365 Acer truncatum HOM05D007952 ORTHO05D009823 6.4e-33 143.7 73 94.5
Atru.chr13.2454 Acer truncatum HOM05D007952 ORTHO05D009823 1.9e-32 142.1 67 98.5
Sc23g0003910 Simmondsia chinensis HOM05D007952 ORTHO05D009823 2.1e-31 138.7 82 84.1
Sc04g0003580 Simmondsia chinensis HOM05D007952 ORTHO05D009823 1.5e-29 132.5 75 86.7
EL10Ac6g15366 Beta vulgaris HOM05D007952 ORTHO05D009823 2.5e-29 131.7 75 86.7
ECA246G1432 Erigeron canadensis HOM05D007952 ORTHO05D009823 4.3e-29 131.0 81 84.0
arahy.Tifrunner.gnm1.ann1.J5KLX8 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.6e-28 129.0 93 71.0
SEGI_38349 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 2.8e-28 128.3 73 87.7
SEGI_08440 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 1.8e-27 125.6 74 85.1
SEGI_09919 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 1.8e-27 125.6 74 85.1
SEGI_21867 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 1.8e-27 125.6 74 85.1
Nn6g32821 Nelumbo nucifera HOM05D007952 ORTHO05D009823 9.0e-27 123.2 61 96.7
Nn6g32826 Nelumbo nucifera HOM05D007952 ORTHO05D009823 9.0e-27 123.2 61 96.7
ECA232G1868 Erigeron canadensis HOM05D000002 ORTHO05D002065 1.5e-26 122.5 71 81.7
arahy.Tifrunner.gnm1.ann1.GIFH8E Arachis hypogaea HOM05D007952 ORTHO05D009823 1.3e-25 119.4 59 93.2
arahy.Tifrunner.gnm1.ann1.RE2PS1 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.3e-25 119.4 59 93.2
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 2.2e-25 118.6 62 88.7
Hma1.2p1_0594F.1_g185798 Hydrangea macrophylla HOM05D007952 ORTHO05D009823 2.2e-25 118.6 56 98.2
Nn6g33130 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.4e-24 115.2 56 98.2
arahy.Tifrunner.gnm1.ann1.0845WK Arachis hypogaea HOM05D007952 ORTHO05D009823 4.2e-24 114.4 52 98.1
arahy.Tifrunner.gnm1.ann1.88RRM9 Arachis hypogaea HOM05D007952 ORTHO05D009823 4.2e-24 114.4 52 98.1
arahy.Tifrunner.gnm1.ann1.XUIM66 Arachis hypogaea HOM05D007952 ORTHO05D009823 4.2e-24 114.4 52 98.1
Oeu022560.1 Olea europaea HOM05D007952 ORTHO05D009823 4.2e-24 114.4 67 80.6
Nitab4.5_0004552g0010 Nicotiana tabacum HOM05D000796 ORTHO05D009823 2.7e-23 111.7 57 93.0
arahy.Tifrunner.gnm1.ann1.HDQ4NC Arachis hypogaea HOM05D007952 ORTHO05D009823 1.0e-22 109.8 52 94.2
Medtr3g035635 Medicago truncatula HOM05D007952 ORTHO05D009823 1.8e-22 109.0 51 96.1
BcaC04g20704 Brassica carinata HOM05D007952 ORTHO05D009823 5.6e-21 104.0 47 100.0
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 7.4e-21 103.6 48 95.8
Nitab4.5_0007400g0010 Nicotiana tabacum HOM05D007952 ORTHO05D009823 1.6e-20 102.4 75 69.3
BolSC44t60812H Brassica oleracea HOM05D007952 ORTHO05D009823 8.1e-20 100.1 50 92.0
arahy.Tifrunner.gnm1.ann1.PHD7EH Arachis hypogaea HOM05D007952 ORTHO05D009823 1.4e-19 99.4 59 78.0
Psat0ss8367g0160 Pisum sativum HOM05D001387 ORTHO05D001250 4.0e-19 97.8 60 76.7
Sc21g0004590 Simmondsia chinensis HOM05D007952 ORTHO05D009823 2.6e-18 95.1 66 71.2
Potri.005G037850 Populus trichocarpa HOM05D007952 ORTHO05D009823 1.7e-17 92.4 57 78.9
CBR_g12953 Chara braunii HOM05D000019 ORTHO05D000048 4.9e-17 90.9 73 60.3
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 1.9e-16 89.0 42 92.9
arahy.Tifrunner.gnm1.ann1.B37VQ6 Arachis hypogaea HOM05D007952 ORTHO05D009823 7.9e-15 83.6 75 60.0
SEGI_02200 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 2.5e-13 78.6 53 71.7
SEGI_20804 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 2.5e-13 78.6 52 75.0
Nitab4.5_0007025g0020 Nicotiana tabacum HOM05D001226 ORTHO05D009823 5.7e-13 77.4 55 69.1
BolSC91t61267H Brassica oleracea HOM05D007952 ORTHO05D009823 3.7e-12 74.7 52 78.8
Ca_02733_v3 Cicer arietinum L. HOM05D008016 ORTHO05D009823 2.0e-10 68.9 37 86.5
CAN.G262.4 Capsicum annuum HOM05D007952 ORTHO05D009823 5.0e-09 64.3 46 67.4
SEGI_35056 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 5.0e-09 64.3 33 84.8
Sopen11g014330 Solanum pennellii HOM05D000743 ORTHO05D000580 1.9e-08 62.4 42 73.8
ECA236G0169 Erigeron canadensis HOM05D000353 ORTHO05D000174 2.5e-08 62.0 58 60.3
DCAR_004958 Daucus carota HOM05D007952 ORTHO05D009823 3.2e-08 61.6 33 84.8
Peaxi162Scf00002g00723 Petunia axillaris HOM05D007952 ORTHO05D009823 3.2e-08 61.6 38 76.3
BolC6t36075H Brassica oleracea HOM05D000963 ORTHO05D009823 7.1e-08 60.5 30 83.3
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 1.6e-07 59.3 26 96.2
CAN.G8.21 Capsicum annuum HOM05D000580 ORTHO05D001362 2.7e-07 58.5 80 41.2
Actinidia30703 Actinidia chinensis HOM05D001966 ORTHO05D009823 7.9e-07 57.0 65 52.3
Oeu000007.1 Olea europaea HOM05D007952 ORTHO05D009823 8.7e-06 53.5 28 75.0


User provided reference genes

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