Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_85.g27411 Utricularia gibba HOM05D005433 ORTHO05D006675 1.6e-136 489.6 274 100.0
unitig_86.g29837 Utricularia gibba HOM05D005433 ORTHO05D006675 1.6e-136 489.6 274 100.0
SGA_v2.0_scaffold73G24224 Striga asiatica HOM05D005433 ORTHO05D006675 4.0e-63 245.7 273 58.6
MSTRG.15245 Avicennia marina HOM05D005433 ORTHO05D006675 2.4e-60 236.5 268 58.2
SalBow8G0584 Salvia bowleyana HOM05D005433 ORTHO05D006675 2.7e-59 233.0 262 56.9
Migut.M00771 Erythranthe guttata HOM05D005433 ORTHO05D006675 1.5e-57 227.3 269 56.9
CSS0020446 Camellia sinensis var. sinensis HOM05D005433 ORTHO05D006675 1.2e-56 224.2 259 53.7
Hma1.2p1_0416F.1_g148475 Hydrangea macrophylla HOM05D005433 ORTHO05D006675 2.1e-56 223.4 209 62.2
Cfa020622 Carpinus fangiana HOM05D005433 ORTHO05D006675 2.4e-55 219.9 237 55.3
Solyc10g007120.4 Solanum lycopersicum HOM05D005433 ORTHO05D006675 6.9e-55 218.4 253 53.4
Haze_09383 Corylus avellana HOM05D005433 ORTHO05D006675 1.2e-54 217.6 286 51.0
TWI38G0185 Tripterygium wilfordii HOM05D005433 ORTHO05D006675 1.5e-54 217.2 199 62.3
Sabra11G0091300 Salix brachista HOM05D005433 ORTHO05D006675 2.0e-54 216.9 212 57.5
PGR083G2284 Punica granatum HOM05D005433 ORTHO05D006675 2.6e-54 216.5 267 52.8
CsaV3_3G019570 Cucumis sativus L. HOM05D005433 ORTHO05D006675 5.8e-54 215.3 217 58.1
Nitab4.5_0005232g0030 Nicotiana tabacum HOM05D005433 ORTHO05D006675 7.6e-54 214.9 269 51.7
QL08p023594 Quercus lobata HOM05D005433 ORTHO05D006675 7.6e-54 214.9 216 57.4
GSVIVG01014263001 Vitis vinifera HOM05D005433 ORTHO05D006675 7.6e-54 214.9 272 52.9
Sopen10g003020 Solanum pennellii HOM05D005433 ORTHO05D006675 1.3e-53 214.2 251 52.2
Potri.011G097800 Populus trichocarpa HOM05D005433 ORTHO05D006675 2.2e-53 213.4 212 58.5
Actinidia35236 Actinidia chinensis HOM05D005433 ORTHO05D006675 2.9e-53 213.0 211 60.2
Thecc.07G099400 Theobroma cacao HOM05D005433 ORTHO05D006675 2.9e-53 213.0 226 57.5
THA.LOC104810456 Tarenaya hassleriana HOM05D005433 ORTHO05D006675 3.8e-53 212.6 268 53.4
Nitab4.5_0001208g0170 Nicotiana tabacum HOM05D005433 ORTHO05D006675 6.4e-53 211.8 269 51.3
ClCG05G009210 Citrullus lanatus HOM05D005433 ORTHO05D006675 8.4e-53 211.5 270 51.9
TAR624G0745 Trochodendron aralioides HOM05D005433 ORTHO05D006675 1.1e-52 211.1 209 59.8
CAN.G1119.17 Capsicum annuum HOM05D005433 ORTHO05D006675 1.4e-52 210.7 273 49.8
PGSC0003DMG400021311 Solanum tuberosum HOM05D005433 ORTHO05D006675 1.4e-52 210.7 266 51.1
Nn1g06380 Nelumbo nucifera HOM05D005433 ORTHO05D006675 1.9e-52 210.3 266 53.8
AUR62036145 Chenopodium quinoa HOM05D005433 ORTHO05D006675 3.2e-52 209.5 203 61.1
Rhsim04G0023000 Rhododendron simsii HOM05D005433 ORTHO05D006675 3.2e-52 209.5 282 50.7
Manes.03G104600 Manihot esculenta HOM05D005433 ORTHO05D006675 9.3e-52 208.0 170 65.9
Ciclev10009151m.g Citrus clementina HOM05D005433 ORTHO05D006675 2.1e-51 206.8 233 54.5
CiPaw.12G116900 Carya illinoinensis HOM05D005433 ORTHO05D006675 3.5e-51 206.1 287 48.1
Duzib213G0446 Durio zibethinus HOM05D005433 ORTHO05D006675 4.6e-51 205.7 221 58.4
Cc05_g11610 Coffea canephora HOM05D005433 ORTHO05D006675 6.0e-51 205.3 296 47.6
Eucgr.F01178 Eucalyptus grandis HOM05D005433 ORTHO05D006675 6.0e-51 205.3 211 54.5
Gorai.002G066400 Gossypium raimondii HOM05D005433 ORTHO05D006675 7.8e-51 204.9 285 50.2
Gohir.A01G060400 Gossypium hirsutum HOM05D005433 ORTHO05D006675 1.3e-50 204.1 285 50.2
Gohir.D01G046900 Gossypium hirsutum HOM05D005433 ORTHO05D006675 1.3e-50 204.1 285 49.8
Peaxi162Scf00027g01311 Petunia axillaris HOM05D005433 ORTHO05D006675 1.3e-50 204.1 250 52.0
Cpa.g.sc80.11 Carica papaya HOM05D005433 ORTHO05D006675 1.7e-50 203.8 210 57.6
arahy.Tifrunner.gnm1.ann1.7LX6SY Arachis hypogaea HOM05D005433 ORTHO05D006675 2.3e-50 203.4 200 59.5
MD03G1235600 Malus domestica HOM05D005433 ORTHO05D006675 3.9e-50 202.6 264 51.1
Aa31LG8G2320 Aethionema arabicum HOM05D005433 ORTHO05D006675 5.1e-50 202.2 273 49.8
CANSAT35G1219 Cannabis sativa HOM05D005433 ORTHO05D006675 5.1e-50 202.2 202 60.4
PSO675G6755 Papaver somniferum HOM05D005433 ORTHO05D006675 1.5e-49 200.7 277 47.3
Lalb_Chr25g0286191 Lupinus albus HOM05D005433 ORTHO05D006675 1.9e-49 200.3 230 55.7
DCAR_019573 Daucus carota HOM05D005433 ORTHO05D006675 2.5e-49 199.9 204 58.8
vmacro09517 Vaccinium macrocarpon HOM05D005433 ORTHO05D006675 2.5e-49 199.9 324 44.4
EL10Ac4g08262 Beta vulgaris HOM05D005433 ORTHO05D006675 3.3e-49 199.5 204 58.3
arahy.Tifrunner.gnm1.ann1.H96BGA Arachis hypogaea HOM05D005433 ORTHO05D006675 5.6e-49 198.7 206 57.8
ECA234G3266 Erigeron canadensis HOM05D005433 ORTHO05D006675 7.3e-49 198.4 211 55.0
MBI07_g32542_MAGBIO Magnolia biondii HOM05D005433 ORTHO05D006675 9.6e-49 198.0 179 63.7
RcHm_v2.0_Chr5g0032261 Rosa chinensis HOM05D005433 ORTHO05D006675 1.6e-48 197.2 284 49.6
VMungo0331G0725 Vigna mungo HOM05D005433 ORTHO05D006675 1.6e-48 197.2 196 59.2
Thhalv10021284m.g Eutrema salsugineum HOM05D005433 ORTHO05D006675 3.6e-48 196.1 264 51.1
AT3G15110 Arabidopsis thaliana HOM05D005433 ORTHO05D006675 4.8e-48 195.7 249 51.8
Glyma.12G227200 Glycine max HOM05D005433 ORTHO05D006675 4.8e-48 195.7 218 55.5
PSO541G1927 Papaver somniferum HOM05D005433 ORTHO05D006675 4.8e-48 195.7 277 46.9
Sc16g0007310 Simmondsia chinensis HOM05D005433 ORTHO05D006675 6.2e-48 195.3 269 47.6
HanXRQChr10g0302491 Helianthus annuus HOM05D005433 ORTHO05D006675 8.1e-48 194.9 199 57.3
Lsat_1_v5_gn_5_127421 Lactuca sativa HOM05D005433 ORTHO05D006675 1.4e-47 194.1 238 51.3
AL3G27460 Arabidopsis lyrata HOM05D005433 ORTHO05D006675 1.8e-47 193.7 264 48.9
CDE10G1174 Ceratophyllum demersum HOM05D005433 ORTHO05D006675 1.8e-47 193.7 211 55.5
FAN11G1719 Fragaria x ananassa HOM05D005433 ORTHO05D006675 2.4e-47 193.4 199 58.3
Carub.0003s1475 Capsella rubella HOM05D005433 ORTHO05D006675 4.0e-47 192.6 229 53.3
Sp3g13310 Schrenkiella parvula HOM05D005433 ORTHO05D006675 6.9e-47 191.8 257 49.0
Phvul.010G112200 Phaseolus vulgaris HOM05D005433 ORTHO05D006675 1.2e-46 191.0 184 59.8
FvH4_3g19170 Fragaria vesca HOM05D005433 ORTHO05D006675 2.6e-46 189.9 267 50.2
A05p34330 Brassica napus HOM05D005433 ORTHO05D006675 3.4e-46 189.5 245 48.2
BraA05t22254Z Brassica rapa HOM05D005433 ORTHO05D006675 3.4e-46 189.5 244 48.4
FAN25G0011 Fragaria x ananassa HOM05D005433 ORTHO05D006675 4.5e-46 189.1 267 49.8
Lj3g0015051 Lotus japonicus HOM05D005433 ORTHO05D006675 4.5e-46 189.1 258 51.9
Psat5g241440 Pisum sativum HOM05D005433 ORTHO05D006675 9.9e-46 188.0 229 51.5
BcaB06g29536 Brassica carinata HOM05D005433 ORTHO05D006675 4.9e-45 185.7 269 45.7
C05p52110 Brassica napus HOM05D005433 ORTHO05D006675 4.9e-45 185.7 269 45.7
BolC5t33896H Brassica oleracea HOM05D005433 ORTHO05D006675 4.9e-45 185.7 269 45.7
FAN21G1059 Fragaria x ananassa HOM05D005433 ORTHO05D006675 1.1e-44 184.5 212 54.7
Os02g0307800 Oryza sativa ssp. japonica HOM05D005433 ORTHO05D006675 1.1e-44 184.5 268 49.3
TPR.G17538 Trifolium pratense HOM05D005433 ORTHO05D006675 1.4e-44 184.1 257 49.0
FAN16G0161 Fragaria x ananassa HOM05D005433 ORTHO05D006675 1.9e-44 183.7 267 48.3
ATR0602G229 Amborella trichopoda HOM05D005433 ORTHO05D006675 3.2e-44 183.0 198 57.6
Aqoxy4G00583 Aquilegia oxysepala HOM05D005433 ORTHO05D006675 4.2e-44 182.6 269 48.7
Ca_03534_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 4.6e-43 179.1 284 45.4
Ca_30930_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 4.6e-43 179.1 284 45.4
Zm00001eb235270 Zea mays HOM05D005433 ORTHO05D006675 6.0e-43 178.7 229 50.2
Medtr2g078540 Medicago truncatula HOM05D005433 ORTHO05D006675 3.9e-42 176.0 226 51.3
MSTRG.12890 Avicennia marina HOM05D005433 ORTHO05D006675 1.1e-41 174.5 228 50.9
Glyma.06G235100 Glycine max HOM05D005433 ORTHO05D006675 8.1e-40 168.3 180 53.9
Dinv14949 Davidia involucrata HOM05D005433 ORTHO05D006675 9.0e-39 164.9 192 55.2
Gohir.D11G306500 Gossypium hirsutum HOM05D005433 ORTHO05D006675 9.0e-39 164.9 275 45.8
Gorai.007G325500 Gossypium raimondii HOM05D005433 ORTHO05D006675 7.6e-38 161.8 241 48.1
Lj2g0011732 Lotus japonicus HOM05D005433 ORTHO05D006675 9.9e-38 161.4 188 51.6
Migut.H01964 Erythranthe guttata HOM05D005433 ORTHO05D006675 1.7e-37 160.6 206 51.5
Atru.chr2.2384 Acer truncatum HOM05D005433 ORTHO05D006675 2.2e-37 160.2 204 51.0
Gohir.A11G286600 Gossypium hirsutum HOM05D005433 ORTHO05D006675 2.9e-37 159.8 272 44.9
Sed0015039 Sechium edule HOM05D005433 ORTHO05D006675 1.9e-36 157.1 155 61.3
Prupe.4G173400 Prunus persica HOM05D005433 ORTHO05D006675 9.3e-36 154.8 145 60.7
AUR62019491 Chenopodium quinoa HOM05D005433 ORTHO05D006675 1.5e-33 147.5 204 49.5
MD11G1256600 Malus domestica HOM05D005433 ORTHO05D006675 7.4e-33 145.2 127 62.2
Mapoly0060s0103 Marchantia polymorpha HOM05D005433 ORTHO05D006675 2.8e-32 143.3 206 48.5
Medtr6g042030 Medicago truncatula HOM05D005433 ORTHO05D006675 1.1e-31 141.4 196 49.0
Psat1g075280 Pisum sativum HOM05D005433 ORTHO05D006675 5.3e-31 139.0 193 46.6
Pp3c11_19700 Physcomitrium patens HOM05D005433 ORTHO05D006675 2.0e-30 137.1 241 43.2
Lj8A153T41 Lonicera japonica HOM05D005433 ORTHO05D006675 1.0e-29 134.8 128 60.2
Thecc.07G099700 Theobroma cacao HOM05D005433 ORTHO05D006675 4.2e-28 129.4 132 59.8
HPP92_027387 Vanilla planifolia HOM05D005433 ORTHO05D006675 4.2e-28 129.4 192 46.4
AagrBONN_evm.TU.Sc2ySwM_368.1222 Anthoceros agrestis HOM05D005433 ORTHO05D006675 9.3e-28 128.3 214 38.8
TPR.G19712 Trifolium pratense HOM05D005433 ORTHO05D006675 9.3e-28 128.3 270 40.0
arahy.Tifrunner.gnm1.ann1.2X8QJZ Arachis hypogaea HOM05D005433 ORTHO05D006675 5.7e-25 119.0 252 39.7
arahy.Tifrunner.gnm1.ann1.8TDA44 Arachis hypogaea HOM05D005433 ORTHO05D006675 1.3e-24 117.9 263 39.9
SGA_v2.0_scaffold70G23696 Striga asiatica HOM05D005433 ORTHO05D006675 4.5e-22 109.4 184 43.5
SMO143G0248 Selaginella moellendorffii HOM05D009232 ORTHO05D006675 7.6e-22 108.6 210 37.6
CBR_g28819 Chara braunii HOM05D005433 ORTHO05D006675 1.7e-21 107.5 230 37.4
Lsat_1_v5_gn_7_42380 Lactuca sativa HOM05D005433 ORTHO05D006675 5.0e-21 105.9 158 48.1
C09p61630 Brassica napus HOM05D005433 ORTHO05D006675 4.2e-20 102.8 134 50.0
BolC9t59001H Brassica oleracea HOM05D005433 ORTHO05D006675 4.2e-20 102.8 134 50.0
Oeu051094.1 Olea europaea HOM05D005433 ORTHO05D006675 9.3e-20 101.7 224 38.8
C02p31450 Brassica napus HOM05D005433 ORTHO05D006675 3.6e-19 99.8 102 58.8
Lalb_Chr03g0030801 Lupinus albus HOM05D005433 ORTHO05D006675 1.1e-17 94.7 139 42.4
Oeu051093.1 Olea europaea HOM05D005433 ORTHO05D006675 3.3e-17 93.2 175 37.7
Lsat_1_v5_gn_0_4360 Lactuca sativa HOM05D005433 ORTHO05D006675 1.1e-15 88.2 158 42.4
Cre03.g167400 Chlamydomonas reinhardtii HOM05D005433 ORTHO05D006675 3.4e-14 83.2 142 40.8
CARHR090080 Cardamine hirsuta HOM05D005433 ORTHO05D006675 4.5e-14 82.8 74 63.5
BcaB01g02390 Brassica carinata HOM05D005433 ORTHO05D006675 2.9e-13 80.1 201 36.3
Glyma.13G273100 Glycine max HOM05D005433 ORTHO05D006675 1.4e-12 77.8 93 48.4
EL10Ac5g11588 Beta vulgaris HOM05D005433 ORTHO05D006675 7.9e-11 72.0 71 59.2
MCO01G315 Micromonas commoda HOM05D005433 ORTHO05D006675 3.9e-10 69.7 151 31.8
Oeu055126.1 Olea europaea HOM05D005433 ORTHO05D006675 1.3e-08 64.7 115 45.2
Lsat_1_v5_gn_4_180780 Lactuca sativa HOM05D005433 ORTHO05D006675 5.3e-07 59.3 60 58.3


User provided reference genes

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