Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 5.1e-94 347.8 188 100.0
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 3.6e-23 112.5 253 38.3
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 6.2e-23 111.7 263 38.4
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 1.1e-19 100.9 197 46.7
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 2.7e-18 96.3 147 42.9
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 3.9e-17 92.4 186 40.9
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 5.1e-17 92.0 220 34.5
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 1.9e-16 90.1 222 37.4
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 1.9e-16 90.1 146 39.7
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 1.9e-16 90.1 146 39.7
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 2.5e-16 89.7 177 41.8
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 7.3e-16 88.2 144 39.6
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 7.3e-16 88.2 147 38.1
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 9.6e-16 87.8 147 38.1
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 9.6e-16 87.8 257 35.0
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 1.3e-15 87.4 143 39.2
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 1.3e-15 87.4 146 40.4
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 1.6e-15 87.0 148 41.2
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 1.6e-15 87.0 202 41.6
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 1.6e-15 87.0 143 41.3
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 2.1e-15 86.7 146 38.4
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 2.1e-15 86.7 143 41.3
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 2.1e-15 86.7 246 34.6
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 2.1e-15 86.7 201 37.3
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 2.8e-15 86.3 150 37.3
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 1.1e-14 84.3 202 32.2
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 1.1e-14 84.3 144 38.2
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 1.4e-14 84.0 148 38.5
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 1.8e-14 83.6 233 36.9
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 5.3e-14 82.0 259 31.3
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 5.3e-14 82.0 233 36.5
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 6.9e-14 81.6 143 38.5
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 9.0e-14 81.3 148 37.8
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 1.5e-13 80.5 244 31.6
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 2.6e-13 79.7 186 37.1
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 3.4e-13 79.3 141 37.6
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 3.4e-13 79.3 180 36.7
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 3.4e-13 79.3 186 37.6
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 3.4e-13 79.3 142 38.7
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 5.8e-13 78.6 144 36.8
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 7.6e-13 78.2 143 37.1
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 7.6e-13 78.2 182 40.1
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 7.6e-13 78.2 143 37.8
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 9.9e-13 77.8 146 36.3
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 9.9e-13 77.8 189 40.2
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 1.3e-12 77.4 149 38.3
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 1.7e-12 77.0 197 31.5
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 1.7e-12 77.0 186 33.3
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 2.2e-12 76.6 141 38.3
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 2.2e-12 76.6 145 36.6
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 2.2e-12 76.6 143 38.5
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 3.8e-12 75.9 142 36.6
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 3.8e-12 75.9 141 36.9
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 3.8e-12 75.9 143 37.8
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 3.8e-12 75.9 143 36.4
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 3.8e-12 75.9 141 36.9
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 4.9e-12 75.5 141 36.9
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 4.9e-12 75.5 141 36.9
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 4.9e-12 75.5 144 37.5
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 4.9e-12 75.5 142 36.6
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 6.4e-12 75.1 144 36.8
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 8.4e-12 74.7 141 36.9
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 8.4e-12 74.7 159 42.1
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 8.4e-12 74.7 178 38.2
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 8.4e-12 74.7 141 37.6
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 8.4e-12 74.7 152 37.5
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 8.4e-12 74.7 144 33.3
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 1.4e-11 73.9 153 34.6
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 1.9e-11 73.6 141 36.2
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 1.9e-11 73.6 141 36.2
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 2.4e-11 73.2 51 72.5
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 2.4e-11 73.2 148 34.5
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 3.2e-11 72.8 142 35.9
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 4.2e-11 72.4 174 37.4
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 4.2e-11 72.4 148 34.5
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 7.1e-11 71.6 143 35.0
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 2.7e-10 69.7 151 35.8
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 2.7e-10 69.7 89 62.9
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 2.7e-10 69.7 143 34.3
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 3.5e-10 69.3 46 71.7
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 4.6e-10 68.9 96 54.2
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 4.6e-10 68.9 46 73.9
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 7.9e-10 68.2 120 41.7
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 1.0e-09 67.8 145 36.6
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 1.0e-09 67.8 177 33.9
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 1.3e-09 67.4 150 33.3
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 1.8e-09 67.0 125 37.6
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 2.3e-09 66.6 41 75.6
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 2.3e-09 66.6 41 75.6
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 5.1e-09 65.5 51 68.6
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 6.7e-09 65.1 41 73.2
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 1.1e-08 64.3 145 33.1
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 3.3e-08 62.8 179 30.2
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 3.3e-08 62.8 179 30.2
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 4.3e-08 62.4 43 69.8
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 4.3e-08 62.4 153 28.1
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.3e-07 60.8 50 66.0
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 4.8e-07 58.9 129 35.7
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 4.0e-06 55.8 117 34.2


User provided reference genes

Program Settings