Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_85.g27246 Utricularia gibba HOM05D005557 ORTHO05D006748 4.8e-160 567.8 288 100.0
SalBow6G3747 Salvia bowleyana HOM05D005557 ORTHO05D006748 2.5e-84 316.2 293 58.4
SGA_v2.0_scaffold296G47553 Striga asiatica HOM05D005557 ORTHO05D006748 2.8e-83 312.8 324 54.3
Migut.J00918 Erythranthe guttata HOM05D005557 ORTHO05D006748 1.8e-82 310.1 297 56.6
MSTRG.10500 Avicennia marina HOM05D005557 ORTHO05D006748 3.1e-82 309.3 309 55.7
Atru.chr7.1734 Acer truncatum HOM05D005557 ORTHO05D006748 2.2e-80 303.1 221 66.5
CiPaw.03G203700 Carya illinoinensis HOM05D005557 ORTHO05D006748 2.2e-80 303.1 285 56.1
Thecc.08G180200 Theobroma cacao HOM05D005557 ORTHO05D006748 2.5e-79 299.7 277 57.0
Ciclev10009013m.g Citrus clementina HOM05D005557 ORTHO05D006748 9.3e-79 297.7 290 55.2
Cc06_g12460 Coffea canephora HOM05D005557 ORTHO05D006748 2.7e-78 296.2 220 64.5
Lj7A689T78 Lonicera japonica HOM05D005557 ORTHO05D006748 6.1e-78 295.0 290 53.8
GSVIVG01015048001 Vitis vinifera HOM05D005557 ORTHO05D006748 1.3e-77 293.9 221 64.3
Hma1.2p1_0169F.1_g074410 Hydrangea macrophylla HOM05D005557 ORTHO05D006748 2.3e-77 293.1 224 65.2
QL11p001232 Quercus lobata HOM05D005557 ORTHO05D006748 2.3e-77 293.1 228 61.0
Peaxi162Scf00880g00018 Petunia axillaris HOM05D005557 ORTHO05D006748 3.9e-77 292.4 255 60.0
SGA_v2.0_scaffold31G12665 Striga asiatica HOM05D005557 ORTHO05D006748 3.9e-77 292.4 293 53.9
Cfa002966 Carpinus fangiana HOM05D000173 ORTHO05D006748 5.1e-77 292.0 218 64.7
Prupe.2G075400 Prunus persica HOM05D005557 ORTHO05D006748 5.1e-77 292.0 304 52.6
Gohir.A06G078200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 6.7e-77 291.6 248 59.3
CANSAT56G2230 Cannabis sativa HOM05D005557 ORTHO05D006748 8.7e-77 291.2 231 62.8
RcHm_v2.0_Chr1g0332351 Rosa chinensis HOM05D005557 ORTHO05D006748 2.5e-76 289.7 290 53.1
TWI32G1325 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 7.4e-76 288.1 221 62.4
Dinv42413 Davidia involucrata HOM05D005557 ORTHO05D006748 1.3e-75 287.3 257 58.0
Sabra06G0109200 Salix brachista HOM05D005557 ORTHO05D006748 1.3e-75 287.3 241 58.5
TWI63G1120 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 1.6e-75 287.0 219 63.0
PGR142G2674 Punica granatum HOM05D005557 ORTHO05D006748 2.2e-75 286.6 305 51.5
Potri.006G139800 Populus trichocarpa HOM05D005557 ORTHO05D006748 3.7e-75 285.8 241 58.5
Nitab4.5_0000343g0390 Nicotiana tabacum HOM05D005557 ORTHO05D006748 4.8e-75 285.4 222 62.6
PGSC0003DMG400016040 Solanum tuberosum HOM05D005557 ORTHO05D006748 4.8e-75 285.4 309 50.2
TAR626G1135 Trochodendron aralioides HOM05D005557 ORTHO05D006748 4.8e-75 285.4 238 58.4
FvH4_7g05500 Fragaria vesca HOM05D005557 ORTHO05D006748 8.2e-75 284.6 249 57.4
Duzib168G0027 Durio zibethinus HOM05D005557 ORTHO05D006748 1.8e-74 283.5 304 53.3
Solyc07g042150.3 Solanum lycopersicum HOM05D005557 ORTHO05D006748 2.4e-74 283.1 232 60.3
FAN01G0749 Fragaria x ananassa HOM05D005557 ORTHO05D006748 3.1e-74 282.7 249 57.0
FAN10G4084 Fragaria x ananassa HOM05D005557 ORTHO05D006748 3.1e-74 282.7 249 57.0
Sopen07g021740 Solanum pennellii HOM05D005557 ORTHO05D006748 4.1e-74 282.3 235 58.3
FAN03G2003 Fragaria x ananassa HOM05D005557 ORTHO05D006748 5.3e-74 282.0 249 57.0
ClCG03G014930 Citrullus lanatus HOM05D005557 ORTHO05D006748 6.9e-74 281.6 226 61.5
Lalb_Chr13g0299361 Lupinus albus HOM05D005557 ORTHO05D006748 6.9e-74 281.6 284 52.8
Actinidia30238 Actinidia chinensis HOM05D005557 ORTHO05D006748 9.0e-74 281.2 222 63.1
Manes.03G042000 Manihot esculenta HOM05D005557 ORTHO05D006748 9.0e-74 281.2 214 63.1
Nitab4.5_0008784g0050 Nicotiana tabacum HOM05D005557 ORTHO05D006748 9.0e-74 281.2 219 61.6
CSS0017494 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 1.2e-73 280.8 213 63.4
DCAR_024765 Daucus carota HOM05D005557 ORTHO05D006748 1.2e-73 280.8 255 56.1
Gorai.010G090300 Gossypium raimondii HOM05D005557 ORTHO05D006748 2.0e-73 280.0 282 55.0
COL.COLO4_18069 Corchorus olitorius HOM05D005557 ORTHO05D006748 3.4e-73 279.3 208 64.9
arahy.Tifrunner.gnm1.ann1.C56SYK Arachis hypogaea HOM05D005557 ORTHO05D006748 4.5e-73 278.9 213 63.4
MD07G1063400 Malus domestica HOM05D005557 ORTHO05D006748 4.5e-73 278.9 284 51.1
PSO386G0114 Papaver somniferum HOM05D005557 ORTHO05D006748 7.7e-73 278.1 233 59.2
CAN.G32.9 Capsicum annuum HOM05D005557 ORTHO05D006748 1.3e-72 277.3 258 55.0
Aqoxy3G00735 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 1.7e-72 276.9 255 54.1
arahy.Tifrunner.gnm1.ann1.568RE3 Arachis hypogaea HOM05D005557 ORTHO05D006748 2.2e-72 276.6 213 62.9
MD02G1257100 Malus domestica HOM05D005557 ORTHO05D006748 2.2e-72 276.6 297 50.5
ECA234G3626 Erigeron canadensis HOM05D005557 ORTHO05D006748 6.5e-72 275.0 253 56.9
BcaB07g31927 Brassica carinata HOM05D005557 ORTHO05D006748 1.4e-71 273.9 264 53.0
Dinv25539 Davidia involucrata HOM05D005557 ORTHO05D006748 1.4e-71 273.9 230 60.9
Sed0003389 Sechium edule HOM05D005557 ORTHO05D006748 1.4e-71 273.9 214 61.2
Lsat_1_v5_gn_5_139800 Lactuca sativa HOM05D005557 ORTHO05D006748 1.9e-71 273.5 229 59.4
Duzib187G0437 Durio zibethinus HOM05D005557 ORTHO05D006748 2.5e-71 273.1 297 52.2
HanXRQChr12g0354431 Helianthus annuus HOM05D005557 ORTHO05D006748 5.5e-71 271.9 216 63.0
Aa31LG7G3880 Aethionema arabicum HOM05D005557 ORTHO05D006748 7.2e-71 271.6 277 51.6
Thhalv10008278m.g Eutrema salsugineum HOM05D005557 ORTHO05D006748 7.2e-71 271.6 265 53.2
CsaV3_1G041220 Cucumis sativus L. HOM05D005557 ORTHO05D006748 9.4e-71 271.2 227 59.9
Cpa.g.sc28.12 Carica papaya HOM05D005557 ORTHO05D006748 1.6e-70 270.4 241 57.3
AL1G31720 Arabidopsis lyrata HOM05D005557 ORTHO05D006748 7.9e-70 268.1 278 51.8
THA.LOC104815688 Tarenaya hassleriana HOM05D005557 ORTHO05D006748 7.9e-70 268.1 224 58.0
Phvul.003G129500 Phaseolus vulgaris HOM05D005557 ORTHO05D006748 1.0e-69 267.7 215 59.5
Lj4g0021187 Lotus japonicus HOM05D005557 ORTHO05D006748 1.4e-69 267.3 216 59.7
BolC5t30454H Brassica oleracea HOM05D005557 ORTHO05D006748 1.8e-69 266.9 301 48.8
CARHR019740 Cardamine hirsuta HOM05D005557 ORTHO05D006748 1.8e-69 266.9 299 48.8
A06p15270 Brassica napus HOM05D005557 ORTHO05D006748 2.3e-69 266.5 295 49.8
BraA06t24641Z Brassica rapa HOM05D005557 ORTHO05D006748 2.3e-69 266.5 295 49.8
Eucgr.C00788 Eucalyptus grandis HOM05D005557 ORTHO05D006748 2.3e-69 266.5 214 58.4
BcaC05g25811 Brassica carinata HOM05D005557 ORTHO05D006748 3.0e-69 266.2 286 49.7
C05p17510 Brassica napus HOM05D005557 ORTHO05D006748 3.0e-69 266.2 294 49.0
HPP92_013279 Vanilla planifolia HOM05D005557 ORTHO05D006748 3.0e-69 266.2 230 56.1
AT1G19140 Arabidopsis thaliana HOM05D005557 ORTHO05D006748 3.9e-69 265.8 275 50.5
Glyma.13G111700 Glycine max HOM05D005557 ORTHO05D006748 3.9e-69 265.8 226 57.5
FAN10G0153 Fragaria x ananassa HOM05D005557 ORTHO05D006748 6.7e-69 265.0 249 55.0
vmacro17121 Vaccinium macrocarpon HOM05D000173 ORTHO05D006748 8.8e-69 264.6 265 54.0
Glyma.17G048000 Glycine max HOM05D005557 ORTHO05D006748 2.0e-68 263.5 215 58.1
Lalb_Chr07g0181281 Lupinus albus HOM05D005557 ORTHO05D006748 2.0e-68 263.5 212 58.0
MELO3C015535.2 Cucumis melo HOM05D005557 ORTHO05D006748 3.3e-68 262.7 247 54.3
VMungo1215G1068 Vigna mungo HOM05D005557 ORTHO05D006748 3.3e-68 262.7 245 54.3
Os03g0405100 Oryza sativa ssp. japonica HOM05D005557 ORTHO05D006748 5.7e-68 261.9 215 60.5
Sp1g17050 Schrenkiella parvula HOM05D005557 ORTHO05D006748 5.7e-68 261.9 242 54.1
BcaC07g38981 Brassica carinata HOM05D005557 ORTHO05D006748 9.7e-68 261.2 295 49.2
A08p29990 Brassica napus HOM05D005557 ORTHO05D006748 9.7e-68 261.2 291 48.5
EL10Ac8g19008 Beta vulgaris HOM05D005557 ORTHO05D006748 1.3e-67 260.8 242 56.2
CANSAT56G3371 Cannabis sativa HOM05D005557 ORTHO05D006748 1.3e-67 260.8 239 58.6
CDE05G0257 Ceratophyllum demersum HOM05D005557 ORTHO05D006748 1.3e-67 260.8 234 54.7
Carub.0001s1877 Capsella rubella HOM05D005557 ORTHO05D006748 3.7e-67 259.2 224 57.6
AUR62028302 Chenopodium quinoa HOM05D005557 ORTHO05D006748 4.8e-67 258.8 221 56.6
Aqoxy7G00284 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 1.1e-66 257.7 320 45.9
Rhsim05G0005000 Rhododendron simsii HOM05D000173 ORTHO05D006748 1.1e-66 257.7 220 59.5
Ca_09310_v3 Cicer arietinum L. HOM05D005557 ORTHO05D006748 1.4e-66 257.3 287 50.9
Gohir.D06G077200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 1.8e-66 256.9 250 56.0
BolC8t49542H Brassica oleracea HOM05D005557 ORTHO05D006748 2.4e-66 256.5 212 58.0
CSS0008332 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 2.4e-66 256.5 213 60.1
C08p19230 Brassica napus HOM05D005557 ORTHO05D006748 3.1e-66 256.1 212 58.0
BraA08t34934Z Brassica rapa HOM05D005557 ORTHO05D006748 3.1e-66 256.1 289 47.4
Zm00001eb019520 Zea mays HOM05D005557 ORTHO05D006748 3.1e-66 256.1 211 60.2
BcaB03g12934 Brassica carinata HOM05D005557 ORTHO05D006748 2.0e-65 253.4 233 53.6
Sc18g0002770 Simmondsia chinensis HOM05D005557 ORTHO05D006748 2.6e-65 253.1 224 58.5
Medtr4g125000 Medicago truncatula HOM05D005557 ORTHO05D006748 1.7e-64 250.4 251 50.6
Hund26090 Selenicereus undatus HOM05D005557 ORTHO05D006748 1.9e-63 246.9 194 59.3
SEGI_32471 Sequoiadendron giganteum HOM05D005557 ORTHO05D006748 2.7e-62 243.0 253 49.8
Actinidia39641 Actinidia chinensis HOM05D005557 ORTHO05D006748 1.1e-60 237.7 232 55.2
TPR.G12564 Trifolium pratense HOM05D005557 ORTHO05D006748 1.3e-59 234.2 190 60.5
BcaB03g12932 Brassica carinata HOM05D005557 ORTHO05D006748 2.5e-55 219.9 289 45.3
Pp3c26_10620 Physcomitrium patens HOM05D005557 ORTHO05D006748 5.2e-53 212.2 225 46.7
TAR624G0952 Trochodendron aralioides HOM05D005557 ORTHO05D006748 3.3e-52 209.5 208 52.4
Mapoly0016s0081 Marchantia polymorpha HOM05D005557 ORTHO05D006748 1.1e-50 204.5 239 46.0
Thecc.09G074000 Theobroma cacao HOM05D005557 ORTHO05D006748 2.9e-48 196.4 297 43.4
ATR1100G017 Amborella trichopoda HOM05D005557 ORTHO05D006748 6.5e-48 195.3 177 55.9
Psat7g057840 Pisum sativum HOM05D005557 ORTHO05D006748 6.5e-48 195.3 261 44.4
MBI13_g00696_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 1.9e-47 193.7 203 51.2
SMO364G0522 Selaginella moellendorffii HOM05D005557 ORTHO05D006748 6.1e-46 188.7 232 42.7
Haze_26037 Corylus avellana HOM05D000173 ORTHO05D000316 6.3e-43 178.7 188 51.1
AagrBONN_evm.TU.Sc2ySwM_228.5739 Anthoceros agrestis HOM05D005557 ORTHO05D006748 2.5e-39 166.8 180 46.7
SHI52085 Sapria himalayana HOM05D005557 ORTHO05D006748 4.0e-37 159.5 136 58.1
PSO724G0807 Papaver somniferum HOM05D005557 ORTHO05D006748 1.7e-32 144.1 171 48.0
CBR_g19881 Chara braunii HOM05D005557 ORTHO05D006748 3.8e-32 142.9 161 44.7
arahy.Tifrunner.gnm1.ann1.D619LQ Arachis hypogaea HOM05D005557 ORTHO05D006748 1.2e-28 131.3 112 58.0
AUR62025296 Chenopodium quinoa HOM05D005557 ORTHO05D006748 4.4e-28 129.4 109 56.9
AagrBONN_evm.TU.Sc2ySwM_228.4614 Anthoceros agrestis HOM05D005557 ORTHO05D006748 1.1e-26 124.8 125 48.8
PRCOL_00004586 Prasinoderma coloniale HOM05D005557 ORTHO05D006748 5.0e-24 115.9 208 36.5
MCO02G393 Micromonas commoda HOM05D005557 ORTHO05D006748 2.3e-21 107.1 203 30.5
arahy.Tifrunner.gnm1.ann1.CV9S7K Arachis hypogaea HOM05D005557 ORTHO05D006748 1.7e-19 100.9 101 48.5
arahy.Tifrunner.gnm1.ann1.56M64E Arachis hypogaea HOM05D005557 ORTHO05D006748 8.3e-19 98.6 83 55.4
Cre06.g269550 Chlamydomonas reinhardtii HOM05D005557 ORTHO05D006748 2.7e-17 93.6 140 30.7
Migut.J00920 Erythranthe guttata HOM05D005557 ORTHO05D006748 8.6e-16 88.6 134 44.0
arahy.Tifrunner.gnm1.ann1.67TMSF Arachis hypogaea HOM05D005557 ORTHO05D006748 9.5e-15 85.1 68 57.4
arahy.Tifrunner.gnm1.ann1.WCQ4SR Arachis hypogaea HOM05D005557 ORTHO05D006748 9.5e-15 85.1 80 51.2
Nn1g06537 Nelumbo nucifera HOM05D005557 ORTHO05D006748 6.8e-13 79.0 126 37.3
Migut.J00958 Erythranthe guttata HOM05D005557 ORTHO05D006748 2.9e-11 73.6 129 39.5
MBI13_g00695_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 5.1e-08 62.8 88 40.9
arahy.Tifrunner.gnm1.ann1.L7J4LP Arachis hypogaea HOM05D005557 ORTHO05D006748 8.1e-06 55.5 54 51.9


User provided reference genes

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