Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_85.g27216 Utricularia gibba HOM05D003920 ORTHO05D004877 5.4e-242 840.5 403 100.0
Peaxi162Scf00428g00618 Petunia axillaris HOM05D003920 ORTHO05D004877 1.1e-125 454.1 359 62.4
Migut.N01471 Erythranthe guttata HOM05D003920 ORTHO05D004877 5.4e-125 451.8 352 64.5
Dinv43454 Davidia involucrata HOM05D003920 ORTHO05D004877 7.8e-124 448.0 361 61.5
Psat5g204200 Pisum sativum HOM05D003920 ORTHO05D004877 1.3e-123 447.2 356 60.4
MSTRG.5016 Avicennia marina HOM05D003920 ORTHO05D004877 3.0e-123 446.0 331 66.5
Medtr3g028190 Medicago truncatula HOM05D003920 ORTHO05D004877 3.9e-123 445.7 356 61.0
Lalb_Chr01g0015291 Lupinus albus HOM05D003920 ORTHO05D004877 6.6e-123 444.9 356 60.7
Peaxi162Scf00407g00639 Petunia axillaris HOM05D003920 ORTHO05D004877 8.6e-123 444.5 359 60.4
VMungo1080G0709 Vigna mungo HOM05D003920 ORTHO05D004877 3.3e-122 442.6 362 60.2
Ca_27172_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 9.6e-122 441.0 357 60.8
ECA248G0446 Erigeron canadensis HOM05D003920 ORTHO05D004877 9.6e-122 441.0 350 61.7
Prupe.2G011700 Prunus persica HOM05D003920 ORTHO05D004877 2.1e-121 439.9 366 59.6
MD02G1313900 Malus domestica HOM05D003920 ORTHO05D004877 8.1e-121 438.0 361 61.5
Manes.10G144700 Manihot esculenta HOM05D003920 ORTHO05D004877 8.1e-121 438.0 360 58.6
Rhsim07G0054700 Rhododendron simsii HOM05D003920 ORTHO05D004877 1.4e-120 437.2 351 59.8
SGA_v2.0_scaffold167G38446 Striga asiatica HOM05D003920 ORTHO05D004877 1.4e-120 437.2 340 63.2
HanXRQChr01g0016141 Helianthus annuus HOM05D003920 ORTHO05D004877 2.4e-120 436.4 350 60.3
FvH4_7g00890 Fragaria vesca HOM05D003920 ORTHO05D004877 4.0e-120 435.6 362 59.9
Phvul.005G019900 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 5.2e-120 435.3 362 58.6
TPR.G12140 Trifolium pratense HOM05D003920 ORTHO05D004877 5.2e-120 435.3 346 60.4
FAN06G2354 Fragaria x ananassa HOM05D003920 ORTHO05D004877 6.9e-120 434.9 362 59.7
Lj3g0003225 Lotus japonicus HOM05D003920 ORTHO05D004877 6.9e-120 434.9 358 58.7
Eucgr.J01264 Eucalyptus grandis HOM05D003920 ORTHO05D004877 8.9e-120 434.5 361 61.2
PGR044G2195 Punica granatum HOM05D003920 ORTHO05D004877 2.0e-119 433.3 363 58.7
Aqoxy2G00138 Aquilegia oxysepala HOM05D003920 ORTHO05D004877 4.4e-119 432.2 358 59.5
Nn7g36164 Nelumbo nucifera HOM05D003920 ORTHO05D004877 4.4e-119 432.2 353 60.1
Glyma.08G153800 Glycine max HOM05D003920 ORTHO05D004877 7.6e-119 431.4 362 59.1
Gohir.D08G038400 Gossypium hirsutum HOM05D003920 ORTHO05D004877 9.9e-119 431.0 360 57.8
arahy.Tifrunner.gnm1.ann1.Z50281 Arachis hypogaea HOM05D003920 ORTHO05D004877 1.7e-118 430.3 359 60.2
Gohir.A08G027700 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.7e-118 430.3 360 59.7
Sabra09G0046300 Salix brachista HOM05D003920 ORTHO05D004877 4.9e-118 428.7 357 59.7
Gorai.004G036900 Gossypium raimondii HOM05D003920 ORTHO05D004877 6.4e-118 428.3 360 57.5
MD07G1008500 Malus domestica HOM05D003920 ORTHO05D004877 8.4e-118 427.9 361 59.8
Nitab4.5_0011837g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 8.4e-118 427.9 371 57.1
Glyma.15G272400 Glycine max HOM05D003920 ORTHO05D004877 1.9e-117 426.8 362 58.6
CAN.G709.1 Capsicum annuum HOM05D003920 ORTHO05D004877 2.4e-117 426.4 349 59.3
Sopen10g011530 Solanum pennellii HOM05D003920 ORTHO05D004877 3.2e-117 426.0 360 57.5
Potri.001G268200 Populus trichocarpa HOM05D003920 ORTHO05D004877 7.1e-117 424.9 361 57.3
DCAR_003208 Daucus carota HOM05D003920 ORTHO05D004877 2.7e-116 422.9 359 57.4
Nn2g15431 Nelumbo nucifera HOM05D003920 ORTHO05D004877 2.7e-116 422.9 357 58.3
Potri.009G062600 Populus trichocarpa HOM05D003920 ORTHO05D004877 3.5e-116 422.5 364 58.8
Solyc10g038000.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 3.5e-116 422.5 360 57.2
DCAR_022405 Daucus carota HOM05D003920 ORTHO05D004877 6.0e-116 421.8 359 57.4
PSO384G3532 Papaver somniferum HOM05D003920 ORTHO05D004877 7.8e-116 421.4 363 56.5
Nitab4.5_0000634g0100 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.0e-115 421.0 383 54.3
PSO339G5616 Papaver somniferum HOM05D003920 ORTHO05D004877 3.0e-115 419.5 363 55.9
TWI73G0359 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 3.9e-115 419.1 380 53.7
BraA08t33064Z Brassica rapa HOM05D003920 ORTHO05D004877 5.1e-115 418.7 346 58.7
CARHR291420 Cardamine hirsuta HOM05D003920 ORTHO05D004877 8.7e-115 417.9 345 58.8
Sabra16G0164300 Salix brachista HOM05D003920 ORTHO05D004877 1.1e-114 417.5 359 58.2
Sopen01g034110 Solanum pennellii HOM05D003920 ORTHO05D004877 1.5e-114 417.2 358 57.8
BcaC07g37767 Brassica carinata HOM05D003920 ORTHO05D004877 5.6e-114 415.2 340 58.8
SalBow5G4770 Salvia bowleyana HOM05D003920 ORTHO05D004877 7.3e-114 414.8 354 58.2
arahy.Tifrunner.gnm1.ann1.LBVL0K Arachis hypogaea HOM05D003920 ORTHO05D004877 1.3e-113 414.1 358 58.7
Sed0011667 Sechium edule HOM05D003920 ORTHO05D004877 1.3e-113 414.1 358 57.5
Solyc01g087030.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 2.8e-113 412.9 358 57.8
Thhalv10010518m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 8.1e-113 411.4 344 57.0
Sc10g0000010 Simmondsia chinensis HOM05D003920 ORTHO05D004877 1.1e-112 411.0 343 60.6
Gorai.004G173300 Gossypium raimondii HOM05D003920 ORTHO05D004877 1.2e-111 407.5 357 56.6
Sp1g00020 Schrenkiella parvula HOM05D003920 ORTHO05D004877 1.2e-111 407.5 354 55.1
AUR62009376 Chenopodium quinoa HOM05D003920 ORTHO05D004877 3.4e-111 406.0 335 58.2
ATR0605G260 Amborella trichopoda HOM05D003920 ORTHO05D004877 4.5e-111 405.6 349 57.9
CDE04G0006 Ceratophyllum demersum HOM05D003920 ORTHO05D004877 4.5e-111 405.6 354 55.4
THA.LOC104827426 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 9.9e-111 404.4 350 56.3
THA.LOC104819067 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 3.8e-110 402.5 359 56.0
vmacro13655 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 1.4e-109 400.6 420 50.7
HPP92_005768 Vanilla planifolia HOM05D003920 ORTHO05D004877 1.4e-109 400.6 365 54.8
SEGI_34678 Sequoiadendron giganteum HOM05D003920 ORTHO05D004877 7.1e-109 398.3 335 57.6
MBI04_g13623_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D004877 9.3e-109 397.9 351 55.8
Zm00001eb381600 Zea mays HOM05D003920 ORTHO05D004877 9.3e-109 397.9 369 55.8
Lj9C630T11 Lonicera japonica HOM05D003920 ORTHO05D004877 1.2e-108 397.5 346 55.8
EL10Ac2g04315 Beta vulgaris HOM05D003920 ORTHO05D004877 2.1e-108 396.7 336 57.7
A08p28590 Brassica napus HOM05D003920 ORTHO05D004877 2.7e-108 396.4 331 56.5
AL3G19480 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 4.6e-108 395.6 337 55.8
Sp3g06990 Schrenkiella parvula HOM05D003920 ORTHO05D004877 6.0e-108 395.2 342 55.0
AT3G08505 Arabidopsis thaliana HOM05D003920 ORTHO05D004877 1.3e-107 394.0 338 55.6
TAR369G0176 Trochodendron aralioides HOM05D003920 ORTHO05D004877 5.1e-107 392.1 364 52.7
Thhalv10021103m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 8.7e-107 391.3 343 56.0
COL.COLO4_23923 Corchorus olitorius HOM05D003920 ORTHO05D004877 1.6e-105 387.1 337 56.1
Ciclev10031666m.g Citrus clementina HOM05D003920 ORTHO05D004877 1.1e-104 384.4 314 58.3
RcHm_v2.0_Chr1g0315781 Rosa chinensis HOM05D003920 ORTHO05D004877 2.4e-104 383.3 328 57.6
QL04p007133 Quercus lobata HOM05D003920 ORTHO05D004877 9.0e-104 381.3 327 56.0
CSS0030964 Camellia sinensis var. sinensis HOM05D003920 ORTHO05D004877 1.5e-103 380.6 327 57.5
FAN01G3017 Fragaria x ananassa HOM05D003920 ORTHO05D004877 2.6e-103 379.8 328 57.3
FAN03G2194 Fragaria x ananassa HOM05D003920 ORTHO05D004877 3.4e-103 379.4 328 57.3
BcaB03g11569 Brassica carinata HOM05D003920 ORTHO05D004877 9.9e-103 377.9 339 54.3
CARHR082810 Cardamine hirsuta HOM05D003920 ORTHO05D004877 2.9e-102 376.3 337 52.2
Aa31LG10G17420 Aethionema arabicum HOM05D003920 ORTHO05D004877 6.4e-102 375.2 428 46.3
Carub.0003s0765 Capsella rubella HOM05D003920 ORTHO05D004877 6.4e-102 375.2 341 53.4
MSTRG.20593 Avicennia marina HOM05D003920 ORTHO05D004877 9.3e-101 371.3 344 53.8
Atru.chr11.2647 Acer truncatum HOM05D003920 ORTHO05D004877 2.1e-100 370.2 321 56.1
BraA03t12740Z Brassica rapa HOM05D003920 ORTHO05D004877 6.0e-100 368.6 336 53.6
BcaC09g47976 Brassica carinata HOM05D003920 ORTHO05D004877 1.0e-99 367.9 341 51.6
BraA01t04343Z Brassica rapa HOM05D003920 ORTHO05D004877 1.8e-99 367.1 335 51.6
BcaB04g21254 Brassica carinata HOM05D003920 ORTHO05D004877 5.1e-99 365.5 339 53.1
Haze_03212 Corylus avellana HOM05D003920 ORTHO05D004877 5.1e-99 365.5 322 55.9
Thecc.01G412100 Theobroma cacao HOM05D003920 ORTHO05D004877 5.1e-99 365.5 327 55.0
TAR633G1074 Trochodendron aralioides HOM05D003920 ORTHO05D004877 5.1e-99 365.5 339 53.4
A08p10660 Brassica napus HOM05D003920 ORTHO05D004877 1.9e-98 363.6 311 55.6
A03p35650 Brassica napus HOM05D003920 ORTHO05D004877 3.3e-98 362.8 325 53.2
BolC3t16599H Brassica oleracea HOM05D003920 ORTHO05D004877 3.3e-98 362.8 336 53.6
MELO3C023541.2 Cucumis melo HOM05D003920 ORTHO05D004877 9.6e-98 361.3 317 57.7
BolC8t48154H Brassica oleracea HOM05D003920 ORTHO05D004877 2.8e-97 359.8 305 56.4
CsaV3_7G031170 Cucumis sativus L. HOM05D003920 ORTHO05D004877 3.7e-97 359.4 317 56.5
Gohir.D08G166100 Gossypium hirsutum HOM05D003920 ORTHO05D004877 4.8e-97 359.0 214 73.4
BcaC01g04265 Brassica carinata HOM05D003920 ORTHO05D004877 1.1e-96 357.8 326 53.7
Cc02_g27790 Coffea canephora HOM05D003920 ORTHO05D004877 1.1e-96 357.8 329 53.8
C03p43290 Brassica napus HOM05D003920 ORTHO05D004877 1.4e-96 357.5 323 53.9
Lsat_1_v5_gn_1_107981 Lactuca sativa HOM05D003920 ORTHO05D004877 1.4e-96 357.5 311 56.6
Carub.0005s3016 Capsella rubella HOM05D003920 ORTHO05D004877 5.3e-96 355.5 317 54.3
Thhalv10023829m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 9.0e-96 354.8 347 49.9
AL5G46410 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 1.5e-95 354.0 319 54.9
Pp3c5_25680 Physcomitrium patens HOM05D003920 ORTHO05D004877 1.3e-94 350.9 340 49.4
BolC8t49780H Brassica oleracea HOM05D003920 ORTHO05D004877 1.7e-94 350.5 304 53.6
SMO203G0245 Selaginella moellendorffii HOM05D003920 ORTHO05D004877 7.1e-93 345.1 328 52.1
Mapoly0042s0020 Marchantia polymorpha HOM05D003920 ORTHO05D004877 1.1e-90 337.8 417 44.1
Aa31LG5G18640 Aethionema arabicum HOM05D003920 ORTHO05D004877 4.1e-88 329.3 223 65.9
AUR62023057 Chenopodium quinoa HOM05D003920 ORTHO05D004877 1.1e-85 321.2 291 53.6
Sp5g00030 Schrenkiella parvula HOM05D003920 ORTHO05D004877 1.2e-84 317.8 338 48.5
SGA_v2.0_scaffold24G10678 Striga asiatica HOM05D003920 ORTHO05D004877 4.6e-84 315.8 349 47.3
Nitab4.5_0004786g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.3e-83 314.3 343 48.7
Hund03665 Selenicereus undatus HOM05D003920 ORTHO05D004877 1.8e-83 313.9 295 53.2
ClCG09G004250 Citrullus lanatus HOM05D003920 ORTHO05D004877 2.3e-83 313.5 264 59.1
Zm00001eb252860 Zea mays HOM05D003920 ORTHO05D004877 3.3e-82 309.7 330 46.7
BcaC07g39147 Brassica carinata HOM05D003920 ORTHO05D004877 1.7e-81 307.4 304 51.0
PGR044G2672 Punica granatum HOM05D003920 ORTHO05D004877 4.1e-80 302.8 336 46.1
Manes.07G005000 Manihot esculenta HOM05D003920 ORTHO05D004877 5.3e-80 302.4 297 50.5
Actinidia24671 Actinidia chinensis HOM05D003920 ORTHO05D004877 6.9e-80 302.0 262 56.5
C08p21410 Brassica napus HOM05D003920 ORTHO05D004877 1.0e-78 298.1 261 54.0
Lj7A569G59 Lonicera japonica HOM05D003920 ORTHO05D004877 8.5e-78 295.0 298 49.7
TWI53G1741 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 1.4e-77 294.3 292 50.7
Peaxi162Scf00148g00610 Petunia axillaris HOM05D003920 ORTHO05D004877 3.2e-77 293.1 306 50.0
Potri.004G134400 Populus trichocarpa HOM05D003920 ORTHO05D004877 1.1e-74 284.6 308 47.7
Nitab4.5_0001299g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 7.4e-74 282.0 332 48.2
Actinidia31057 Actinidia chinensis HOM05D003920 ORTHO05D004877 1.3e-73 281.2 359 45.4
AagrBONN_evm.TU.Sc2ySwM_344.3645 Anthoceros agrestis HOM05D003920 ORTHO05D004877 1.3e-73 281.2 316 44.3
Gohir.A08G145200 Gossypium hirsutum HOM05D003920 ORTHO05D004877 2.2e-73 280.4 286 51.0
Lalb_Chr20g0108061 Lupinus albus HOM05D003920 ORTHO05D004877 6.3e-73 278.9 313 47.0
Actinidia36714 Actinidia chinensis HOM05D003920 ORTHO05D004877 1.5e-71 274.2 337 44.5
arahy.Tifrunner.gnm1.ann1.3CZ6TN Arachis hypogaea HOM05D003920 ORTHO05D004877 1.5e-71 274.2 321 46.1
arahy.Tifrunner.gnm1.ann1.NHZH5I Arachis hypogaea HOM05D003920 ORTHO05D004877 5.9e-71 272.3 318 45.9
VMungo1080G1751 Vigna mungo HOM05D003920 ORTHO05D004877 2.2e-70 270.4 328 43.6
Glyma.15G273000 Glycine max HOM05D003920 ORTHO05D004877 5.0e-70 269.2 318 45.6
vmacro08182 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 1.9e-69 267.3 296 48.0
Psat5g204240 Pisum sativum HOM05D003920 ORTHO05D004877 1.2e-68 264.6 321 43.3
Sabra04G0083700 Salix brachista HOM05D003920 ORTHO05D004877 1.6e-68 264.2 302 45.7
Lalb_Chr01g0015331 Lupinus albus HOM05D003920 ORTHO05D004877 2.7e-68 263.5 316 44.9
Phvul.005G020000 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 2.7e-68 263.5 320 43.4
TPR.G12281 Trifolium pratense HOM05D003920 ORTHO05D004877 3.6e-68 263.1 310 44.8
Glyma.08G154100 Glycine max HOM05D003920 ORTHO05D004877 6.1e-68 262.3 319 45.1
Medtr3g028170 Medicago truncatula HOM05D003920 ORTHO05D004877 8.8e-67 258.5 311 44.7
Ca_14370_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 2.2e-65 253.8 320 42.8
Lj3g0002246 Lotus japonicus HOM05D003920 ORTHO05D004877 2.8e-65 253.4 322 39.4
Nitab4.5_0000254g0170 Nicotiana tabacum HOM05D003920 ORTHO05D004877 3.8e-62 243.0 190 61.1
Cre06.g278136 Chlamydomonas reinhardtii HOM05D003920 ORTHO05D004877 5.7e-58 229.2 224 46.4
unitig_26.g8826 Utricularia gibba HOM05D003920 ORTHO05D004877 2.3e-51 207.2 297 43.1
arahy.Tifrunner.gnm1.ann1.HIY6S0 Arachis hypogaea HOM05D003920 ORTHO05D004877 6.8e-51 205.7 317 38.2
arahy.Tifrunner.gnm1.ann1.YQ2HRW Arachis hypogaea HOM05D003920 ORTHO05D004877 7.5e-50 202.2 323 36.8
PRCOL_00005356 Prasinoderma coloniale HOM05D003920 ORTHO05D004877 8.3e-49 198.7 352 34.7
Nitab4.5_0003190g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 5.4e-48 196.1 167 57.5
Oeu039134.1 Olea europaea HOM05D003920 ORTHO05D004877 1.6e-47 194.5 107 81.3
GSVIVG01032073001 Vitis vinifera HOM05D003920 ORTHO05D004877 1.7e-46 191.0 107 78.5
Phvul.011G110100 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 1.0e-38 165.2 93 76.3
TPR.G31394 Trifolium pratense HOM05D002628 ORTHO05D002785 2.4e-16 90.9 119 37.0
Cc02_g27780 Coffea canephora HOM05D003920 ORTHO05D017698 1.6e-12 78.2 41 87.8
QL04p032014 Quercus lobata HOM05D003920 ORTHO05D004877 4.7e-12 76.6 38 81.6
QL04p032319 Quercus lobata HOM05D003920 ORTHO05D004877 1.4e-11 75.1 48 66.7
MBI17_g06171_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D017698 1.3e-09 68.6 66 57.6
BolC8t48153H Brassica oleracea HOM05D003920 ORTHO05D017698 2.9e-09 67.4 45 68.9
BolC8t49779H Brassica oleracea HOM05D003920 ORTHO05D017698 3.8e-09 67.0 41 75.6
BraA08t34788Z Brassica rapa HOM05D003920 ORTHO05D017698 3.8e-09 67.0 41 75.6
QL04p005704 Quercus lobata HOM05D003920 ORTHO05D004877 4.9e-09 66.6 70 47.1
QL05p013448 Quercus lobata HOM05D001342 ORTHO05D017698 7.1e-08 62.8 44 68.2
arahy.Tifrunner.gnm1.ann1.RPY2B8 Arachis hypogaea HOM05D004014 ORTHO05D031593 1.0e-06 58.9 32 84.4
QL93p2025_0050 Quercus lobata HOM05D003920 ORTHO05D337666 1.3e-06 58.5 30 86.7
CARHR211880 Cardamine hirsuta HOM05D000799 ORTHO05D000629 2.3e-06 57.8 127 31.5
C08p21400 Brassica napus HOM05D003920 ORTHO05D017698 3.0e-06 57.4 51 58.8
FAN10G2408 Fragaria x ananassa HOM05D003920 ORTHO05D017698 8.7e-06 55.8 47 59.6


User provided reference genes

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