Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 8.7e-51 203.4 104 100.0
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.6e-36 156.0 107 72.9
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 3.5e-36 154.8 104 76.0
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 1.8e-35 152.5 101 69.3
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 2.3e-35 152.1 100 79.0
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 5.1e-35 151.0 100 76.0
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.1e-34 149.8 101 73.3
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 1.3e-33 146.4 100 74.0
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 2.1e-33 145.6 102 70.6
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 6.2e-33 144.1 100 70.0
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 1.8e-32 142.5 100 70.0
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 1.5e-31 139.4 94 75.5
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 2.6e-31 138.7 103 68.0
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 5.8e-31 137.5 99 67.7
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 5.8e-31 137.5 102 66.7
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 1.3e-30 136.3 101 68.3
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 1.7e-30 136.0 103 68.9
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 1.7e-30 136.0 113 60.2
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 2.2e-30 135.6 102 64.7
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 2.9e-30 135.2 103 63.1
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 2.9e-30 135.2 106 63.2
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 2.9e-30 135.2 101 67.3
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 2.9e-30 135.2 101 67.3
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.9e-30 135.2 107 65.4
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.9e-30 135.2 118 60.2
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 2.9e-30 135.2 102 65.7
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 3.8e-30 134.8 106 65.1
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 4.9e-30 134.4 113 60.2
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 4.9e-30 134.4 113 60.2
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 1.1e-29 133.3 100 65.0
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 1.9e-29 132.5 106 62.3
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 2.5e-29 132.1 100 64.0
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 2.5e-29 132.1 104 63.5
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 3.2e-29 131.7 104 66.3
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 4.2e-29 131.3 107 64.5
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 4.2e-29 131.3 103 65.0
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 4.2e-29 131.3 101 66.3
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 7.1e-29 130.6 103 64.1
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 9.3e-29 130.2 101 65.3
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 9.3e-29 130.2 101 65.3
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 1.2e-28 129.8 100 63.0
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 1.2e-28 129.8 100 66.0
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 1.6e-28 129.4 100 65.0
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 1.6e-28 129.4 100 65.0
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 2.1e-28 129.0 109 61.5
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 2.7e-28 128.6 104 61.5
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 4.6e-28 127.9 107 59.8
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 6.0e-28 127.5 102 61.8
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 6.0e-28 127.5 103 64.1
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 7.9e-28 127.1 104 61.5
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 1.0e-27 126.7 105 59.0
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 1.0e-27 126.7 100 61.0
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 1.8e-27 125.9 104 59.6
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 1.8e-27 125.9 109 57.8
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 2.3e-27 125.6 109 57.8
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 3.0e-27 125.2 104 61.5
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 6.7e-27 124.0 102 59.8
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 8.7e-27 123.6 103 60.2
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 8.7e-27 123.6 103 60.2
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 8.7e-27 123.6 106 59.4
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 1.1e-26 123.2 106 57.5
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 1.5e-26 122.9 104 57.7
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 1.9e-26 122.5 114 56.1
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 2.5e-26 122.1 116 55.2
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 2.5e-26 122.1 116 55.2
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 2.5e-26 122.1 105 60.0
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.5e-26 122.1 103 59.2
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 2.5e-26 122.1 105 57.1
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 3.3e-26 121.7 102 58.8
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 5.7e-26 120.9 102 58.8
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 7.4e-26 120.6 106 56.6
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 9.6e-26 120.2 113 54.0
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 9.6e-26 120.2 116 52.6
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 9.6e-26 120.2 106 56.6
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 9.6e-26 120.2 106 56.6
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 9.6e-26 120.2 113 54.9
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 1.3e-25 119.8 116 52.6
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 1.3e-25 119.8 116 52.6
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 1.3e-25 119.8 116 52.6
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 1.3e-25 119.8 104 57.7
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 1.6e-25 119.4 111 55.0
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 2.1e-25 119.0 119 51.3
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 2.1e-25 119.0 116 54.3
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 3.7e-25 118.2 102 58.8
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 3.7e-25 118.2 101 59.4
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 3.7e-25 118.2 114 55.3
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 4.8e-25 117.9 116 53.4
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 6.2e-25 117.5 106 55.7
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 6.2e-25 117.5 94 62.8
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 8.2e-25 117.1 108 53.7
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 8.2e-25 117.1 117 53.8
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 8.2e-25 117.1 105 58.1
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 1.1e-24 116.7 105 57.1
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 3.1e-24 115.2 100 55.0
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 4.1e-24 114.8 113 53.1
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 5.3e-24 114.4 103 55.3
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 6.9e-24 114.0 114 51.8
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 1.2e-23 113.2 103 55.3
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 1.2e-23 113.2 105 54.3
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 1.5e-23 112.8 108 54.6
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 2.0e-23 112.5 110 52.7
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 3.4e-23 111.7 92 63.0
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 4.5e-23 111.3 93 55.9
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 4.5e-23 111.3 104 56.7
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 5.8e-23 110.9 106 53.8
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 1.7e-22 109.4 102 57.8
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 3.8e-22 108.2 103 53.4
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 8.4e-22 107.1 116 48.3
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 8.4e-22 107.1 116 48.3
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 1.1e-21 106.7 114 48.2
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 1.1e-21 106.7 105 50.5
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.4e-21 106.3 105 55.2
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 3.2e-21 105.1 114 45.6
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 3.2e-21 105.1 102 51.0
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 5.5e-21 104.4 106 50.9
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 7.2e-21 104.0 102 50.0
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 6.1e-20 100.9 115 47.0
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 6.1e-20 100.9 108 52.8
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 1.3e-19 99.8 95 55.8
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 1.9e-18 95.9 112 49.1
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 3.3e-18 95.1 108 42.6
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 5.7e-18 94.4 117 47.0
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 2.2e-17 92.4 110 46.4
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 4.8e-17 91.3 77 61.0
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 4.1e-16 88.2 105 39.0
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 2.1e-12 75.9 72 58.3
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 4.8e-09 64.7 56 58.9
SalBow6G5718 Salvia bowleyana HOM05D006069 ORTHO05D008101 3.1e-08 62.0 54 63.0
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 1.2e-07 60.1 66 48.5


User provided reference genes

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