Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g5043 Utricularia gibba HOM05D007769 ORTHO05D009588 3.0e-32 141.4 77 100.0
Gohir.D01G110800 Gossypium hirsutum HOM05D007769 ORTHO05D009588 5.5e-26 120.6 77 80.5
SalBow7G0030 Salvia bowleyana HOM05D007769 ORTHO05D009588 3.5e-25 117.9 77 83.1
Duzib093G1544 Durio zibethinus HOM05D007769 ORTHO05D009588 6.0e-25 117.1 77 79.2
Actinidia08247 Actinidia chinensis HOM05D007769 ORTHO05D009588 7.9e-25 116.7 77 80.5
TWI12G0690 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 7.9e-25 116.7 76 80.3
Actinidia38106 Actinidia chinensis HOM05D007769 ORTHO05D009588 1.3e-24 115.9 77 80.5
CiPaw.07G174700 Carya illinoinensis HOM05D007769 ORTHO05D009588 1.3e-24 115.9 77 77.9
Manes.05G182100 Manihot esculenta HOM05D007769 ORTHO05D009588 1.8e-24 115.5 77 77.9
CSS0007942 Camellia sinensis var. sinensis HOM05D007769 ORTHO05D009588 2.3e-24 115.2 77 79.2
Gohir.D05G213500 Gossypium hirsutum HOM05D007769 ORTHO05D009588 3.0e-24 114.8 78 78.2
Gorai.009G220200 Gossypium raimondii HOM05D007769 ORTHO05D009588 3.0e-24 114.8 78 78.2
COL.COLO4_28504 Corchorus olitorius HOM05D007769 ORTHO05D009588 3.9e-24 114.4 77 76.6
Potri.014G015866 Populus trichocarpa HOM05D007769 ORTHO05D009588 3.9e-24 114.4 77 77.9
Potri.002G118366 Populus trichocarpa HOM05D007769 ORTHO05D009588 5.1e-24 114.0 77 79.2
TWI56G0221 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 1.1e-23 112.8 76 78.9
Sabra02G0093000 Salix brachista HOM05D007769 ORTHO05D009588 1.6e-22 109.0 72 80.6
Sabra14G0009800 Salix brachista HOM05D007769 ORTHO05D009588 1.6e-22 109.0 72 80.6
Lsat_1_v5_gn_4_131941 Lactuca sativa HOM05D007769 ORTHO05D009588 3.7e-22 107.8 78 78.2
THA.LOC104825778 Tarenaya hassleriana HOM05D007769 ORTHO05D009588 3.7e-22 107.8 77 72.7
PGR031G3105 Punica granatum HOM05D007769 ORTHO05D009588 8.2e-22 106.7 73 78.1
Ciclev10003023m.g Citrus clementina HOM05D007769 ORTHO05D009588 1.4e-21 105.9 72 76.4
HanXRQChr02g0039171 Helianthus annuus HOM05D007769 ORTHO05D009588 1.4e-21 105.9 78 76.9
Atru.chr13.834 Acer truncatum HOM05D007769 ORTHO05D009588 1.8e-21 105.5 75 72.0
CARHR277820 Cardamine hirsuta HOM05D007769 ORTHO05D009588 6.9e-21 103.6 75 72.0
SGA_v2.0_scaffold238G43959 Striga asiatica HOM05D007769 ORTHO05D009588 9.0e-21 103.2 72 79.2
Aa31LG2G19320 Aethionema arabicum HOM05D007769 ORTHO05D009588 1.5e-20 102.4 75 72.0
Eucgr.F02251 Eucalyptus grandis HOM05D007769 ORTHO05D009588 1.5e-20 102.4 77 70.1
Gohir.A01G123201 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.5e-20 102.4 91 63.7
Gohir.A05G210200 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.5e-20 102.4 76 72.4
ECA232G2369 Erigeron canadensis HOM05D007769 ORTHO05D009588 2.6e-20 101.7 78 74.4
MELO3C010803.2 Cucumis melo HOM05D007769 ORTHO05D009588 3.4e-20 101.3 75 72.0
Carub.0008s2472 Capsella rubella HOM05D007769 ORTHO05D009588 4.5e-20 100.9 75 70.7
TPR.G37744 Trifolium pratense HOM05D007769 ORTHO05D009588 1.3e-19 99.4 75 74.7
Lj5g0000132 Lotus japonicus HOM05D007769 ORTHO05D009588 1.7e-19 99.0 75 70.7
Sed0024574 Sechium edule HOM05D007769 ORTHO05D009588 3.8e-19 97.8 75 69.3
BcaNung04624 Brassica carinata HOM05D007769 ORTHO05D009588 6.5e-19 97.1 75 68.0
PSO017G3300 Papaver somniferum HOM05D007769 ORTHO05D009588 1.1e-18 96.3 75 69.3
PSO170G4501 Papaver somniferum HOM05D007769 ORTHO05D009588 1.1e-18 96.3 75 69.3
Ca_13216_v3 Cicer arietinum L. HOM05D007769 ORTHO05D009588 1.4e-18 95.9 75 68.0
Psat6g018200 Pisum sativum HOM05D007769 ORTHO05D009588 1.4e-18 95.9 75 69.3
BcaC04g23346 Brassica carinata HOM05D007769 ORTHO05D009588 1.9e-18 95.5 75 68.0
Migut.C00485 Erythranthe guttata HOM05D007769 ORTHO05D009588 2.5e-18 95.1 77 67.5
AT5G63905 Arabidopsis thaliana HOM05D007769 ORTHO05D009588 5.5e-18 94.0 75 68.0
EL10Ac1g02381 Beta vulgaris HOM05D007769 ORTHO05D009588 5.5e-18 94.0 76 68.4
Medtr1g018020 Medicago truncatula HOM05D007769 ORTHO05D009588 7.2e-18 93.6 75 68.0
AL8G41140 Arabidopsis lyrata HOM05D007769 ORTHO05D009588 3.6e-17 91.3 75 65.3
Aqoxy5G00863 Aquilegia oxysepala HOM05D007769 ORTHO05D009588 4.6e-17 90.9 76 67.1
Glyma.17G234900 Glycine max HOM05D007769 ORTHO05D009588 4.6e-17 90.9 75 70.7
Glyma.14G089015 Glycine max HOM05D007769 ORTHO05D009588 6.1e-17 90.5 75 70.7
Gorai.002G135600 Gossypium raimondii HOM05D007769 ORTHO05D009588 7.9e-17 90.1 90 60.0
Sed0002164 Sechium edule HOM05D007769 ORTHO05D009588 2.3e-16 88.6 70 67.1
A09p08470 Brassica napus HOM05D007769 ORTHO05D009588 3.0e-16 88.2 72 66.7
BraA09t36497Z Brassica rapa HOM05D007769 ORTHO05D009588 3.0e-16 88.2 72 66.7
ClCG08G016510 Citrullus lanatus HOM05D007769 ORTHO05D009588 3.9e-16 87.8 70 70.0
Rhsim07G0219800 Rhododendron simsii HOM05D007769 ORTHO05D009588 5.1e-16 87.4 92 58.7
C09p09600 Brassica napus HOM05D007769 ORTHO05D009588 6.7e-16 87.0 72 66.7
BolC9t53870H Brassica oleracea HOM05D007769 ORTHO05D009588 6.7e-16 87.0 72 66.7
CDE04G0481 Ceratophyllum demersum HOM05D007769 ORTHO05D009588 6.7e-16 87.0 74 68.9
CsaV3_2G026100 Cucumis sativus L. HOM05D007769 ORTHO05D009588 1.9e-15 85.5 70 67.1
Thhalv10005134m.g Eutrema salsugineum HOM05D007769 ORTHO05D009588 2.5e-15 85.1 75 60.0
Dinv39221 Davidia involucrata HOM05D007769 ORTHO05D009588 3.3e-15 84.7 77 63.6
Haze_22434 Corylus avellana HOM05D007769 ORTHO05D009588 1.3e-14 82.8 88 54.5
Sp2g26970 Schrenkiella parvula HOM05D007769 ORTHO05D009588 1.6e-14 82.4 75 58.7
arahy.Tifrunner.gnm1.ann1.3X0B87 Arachis hypogaea HOM05D007769 ORTHO05D009588 2.8e-14 81.6 74 68.9
arahy.Tifrunner.gnm1.ann1.5K9QCS Arachis hypogaea HOM05D007769 ORTHO05D009588 3.7e-14 81.3 74 68.9
Nn1g04547 Nelumbo nucifera HOM05D007769 ORTHO05D009588 6.3e-14 80.5 79 62.0
CANSAT78G2421 Cannabis sativa HOM05D007769 ORTHO05D009588 2.0e-12 75.5 74 59.5
Nn5g30603 Nelumbo nucifera HOM05D007769 ORTHO05D009588 4.5e-12 74.3 80 60.0
HPP92_006078 Vanilla planifolia HOM05D007769 ORTHO05D009588 4.5e-12 74.3 73 61.6
FAN27G1659 Fragaria x ananassa HOM05D007769 ORTHO05D009588 7.7e-12 73.6 77 55.8
QL12p038109 Quercus lobata HOM05D007769 ORTHO05D009588 7.7e-12 73.6 102 47.1
Hma1.2p1_0819F.1_g223670 Hydrangea macrophylla HOM05D007769 ORTHO05D009588 1.0e-11 73.2 72 61.1
Phvul.001G027800 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 1.0e-11 73.2 75 58.7
FAN20G1609 Fragaria x ananassa HOM05D007769 ORTHO05D009588 3.8e-11 71.2 91 51.6
Lalb_Chr14g0368191 Lupinus albus HOM05D007769 ORTHO05D009588 1.4e-10 69.3 72 55.6
CANSAT25G3084 Cannabis sativa HOM05D007769 ORTHO05D009588 4.2e-10 67.8 74 55.4
FAN15G2183 Fragaria x ananassa HOM05D007769 ORTHO05D009588 2.1e-09 65.5 72 54.2
AagrBONN_evm.TU.Sc2ySwM_344.2823 Anthoceros agrestis HOM05D007769 ORTHO05D009588 3.9e-08 61.2 77 46.8
Glyma.06G046700 Glycine max HOM05D015670 ORTHO05D009588 9.7e-07 56.6 70 48.6
Medtr3g103180 Medicago truncatula HOM05D015670 ORTHO05D009588 1.7e-06 55.8 70 51.4
Peaxi162Scf00003g01523 Petunia axillaris HOM05D007769 ORTHO05D009588 4.8e-06 54.3 39 71.8
GSVIVG01009342001 Vitis vinifera HOM05D007769 ORTHO05D009588 6.3e-06 53.9 78 50.0


User provided reference genes

Program Settings