Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4983 Utricularia gibba HOM05D006036 ORTHO05D007736 3.4e-135 485.0 239 100.0
Oeu037915.1 Olea europaea HOM05D006036 ORTHO05D007736 2.3e-83 312.8 178 82.6
MSTRG.4890 Avicennia marina HOM05D006036 ORTHO05D007736 8.3e-81 304.3 195 73.8
SalBow5G3583 Salvia bowleyana HOM05D006036 ORTHO05D007736 1.1e-80 303.9 178 78.7
Lsat_1_v5_gn_4_40940 Lactuca sativa HOM05D006036 ORTHO05D007736 7.0e-80 301.2 176 80.7
SalBow5G0783 Salvia bowleyana HOM05D006036 ORTHO05D007736 9.2e-80 300.8 178 78.1
HanXRQChr16g0520241 Helianthus annuus HOM05D006036 ORTHO05D007736 1.2e-79 300.4 176 80.7
ECA234G4399 Erigeron canadensis HOM05D006036 ORTHO05D007736 7.8e-79 297.7 201 71.6
Cc02_g36690 Coffea canephora HOM05D006036 ORTHO05D007736 1.0e-78 297.4 173 78.6
Sc02g0002580 Simmondsia chinensis HOM05D006036 ORTHO05D007736 1.1e-77 293.9 177 76.8
Aqoxy7G00627 Aquilegia oxysepala HOM05D006036 ORTHO05D007736 2.5e-77 292.7 201 70.1
TWI14G1308 Tripterygium wilfordii HOM05D006036 ORTHO05D007736 4.3e-77 292.0 191 75.4
AUR62013628 Chenopodium quinoa HOM05D006036 ORTHO05D007736 5.6e-77 291.6 203 68.0
CiPaw.01G261900 Carya illinoinensis HOM05D006036 ORTHO05D007736 7.3e-77 291.2 221 67.0
EL10Ac1g00899 Beta vulgaris HOM05D006036 ORTHO05D007736 2.1e-76 289.7 176 76.1
Dinv32378 Davidia involucrata HOM05D006036 ORTHO05D007736 2.1e-76 289.7 203 69.0
Nn1g01232 Nelumbo nucifera HOM05D006036 ORTHO05D007736 2.8e-76 289.3 177 76.8
Ah.16g109830 Amaranthus hybridus HOM05D006036 ORTHO05D007736 6.1e-76 288.1 172 77.3
Sed0006891 Sechium edule HOM05D006036 ORTHO05D007736 6.1e-76 288.1 176 76.7
CsaV3_6G006160 Cucumis sativus L. HOM05D006036 ORTHO05D007736 8.0e-76 287.7 183 72.7
QL08p052466 Quercus lobata HOM05D006036 ORTHO05D007736 8.0e-76 287.7 176 77.3
SEGI_01363 Sequoiadendron giganteum HOM05D006036 ORTHO05D007736 8.0e-76 287.7 172 76.2
Cfa001720 Carpinus fangiana HOM05D006036 ORTHO05D007736 1.0e-75 287.3 200 70.5
CDE02G2016 Ceratophyllum demersum HOM05D006036 ORTHO05D007736 1.4e-75 287.0 204 69.6
Gohir.A08G134500 Gossypium hirsutum HOM05D006036 ORTHO05D007736 1.4e-75 287.0 176 77.3
Actinidia12688 Actinidia chinensis HOM05D006036 ORTHO05D007736 3.0e-75 285.8 177 78.0
Lj9A569G50 Lonicera japonica HOM05D006036 ORTHO05D007736 3.0e-75 285.8 159 82.4
Sed0014119 Sechium edule HOM05D006036 ORTHO05D007736 3.0e-75 285.8 176 75.0
Thecc.01G376100 Theobroma cacao HOM05D006036 ORTHO05D007736 5.2e-75 285.0 176 76.7
RcHm_v2.0_Chr1g0350591 Rosa chinensis HOM05D006036 ORTHO05D007736 1.2e-74 283.9 177 76.8
Haze_16816 Corylus avellana HOM05D006036 ORTHO05D007736 1.5e-74 283.5 218 67.9
Sopen01g037100 Solanum pennellii HOM05D006036 ORTHO05D007736 1.5e-74 283.5 197 71.6
MBI04_g35276_MAGBIO Magnolia biondii HOM05D006036 ORTHO05D007736 2.6e-74 282.7 186 70.4
Hund17020 Selenicereus undatus HOM05D006036 ORTHO05D007736 2.6e-74 282.7 176 75.0
Solyc01g091360.4 Solanum lycopersicum HOM05D006036 ORTHO05D007736 2.6e-74 282.7 197 71.6
Eucgr.E01417 Eucalyptus grandis HOM05D006036 ORTHO05D007736 3.4e-74 282.3 201 68.7
FAN01G0425 Fragaria x ananassa HOM05D006036 ORTHO05D007736 4.4e-74 282.0 177 76.8
PGR042G0035 Punica granatum HOM05D006036 ORTHO05D007736 4.4e-74 282.0 202 69.8
PGSC0003DMG400012774 Solanum tuberosum HOM05D006036 ORTHO05D007736 4.4e-74 282.0 173 77.5
Duzib133G1287 Durio zibethinus HOM05D006036 ORTHO05D007736 9.8e-74 280.8 176 76.1
Zm00001eb210410 Zea mays HOM05D006036 ORTHO05D007736 9.8e-74 280.8 177 74.0
Glyma.01G142900 Glycine max HOM05D006036 ORTHO05D007736 1.7e-73 280.0 197 69.0
Glyma.03G023900 Glycine max HOM05D006036 ORTHO05D007736 1.7e-73 280.0 172 76.2
DCAR_031531 Daucus carota HOM05D006036 ORTHO05D007736 2.9e-73 279.3 159 81.8
FAN03G0372 Fragaria x ananassa HOM05D006036 ORTHO05D007736 2.9e-73 279.3 177 75.7
Prupe.2G145700 Prunus persica HOM05D006036 ORTHO05D007736 3.7e-73 278.9 177 75.7
GSVIVG01027612001 Vitis vinifera HOM05D006036 ORTHO05D007736 3.7e-73 278.9 172 76.7
FAN10G3538 Fragaria x ananassa HOM05D006036 ORTHO05D007736 4.9e-73 278.5 177 75.1
Rhsim01G0147400 Rhododendron simsii HOM05D006036 ORTHO05D007736 4.9e-73 278.5 177 75.7
Potri.002G148400 Populus trichocarpa HOM05D006036 ORTHO05D007736 1.1e-72 277.3 176 75.0
Glyma.14G070200 Glycine max HOM05D006036 ORTHO05D007736 1.4e-72 276.9 196 68.4
Cpa.g.sc349.4 Carica papaya HOM05D006036 ORTHO05D007736 5.4e-72 275.0 176 74.4
FvH4_7g11910 Fragaria vesca HOM05D006036 ORTHO05D007736 1.2e-71 273.9 177 75.1
Manes.05G045200 Manihot esculenta HOM05D006036 ORTHO05D007736 1.6e-71 273.5 176 74.4
Ca_03013_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 2.7e-71 272.7 172 72.1
Os03g0858700 Oryza sativa ssp. japonica HOM05D006036 ORTHO05D007736 2.7e-71 272.7 181 69.6
Psat7g231640 Pisum sativum HOM05D006036 ORTHO05D007736 6.0e-71 271.6 172 72.7
Sabra02G0117300 Salix brachista HOM05D006036 ORTHO05D007736 6.0e-71 271.6 176 73.3
Lalb_Chr07g0189801 Lupinus albus HOM05D006036 ORTHO05D007736 1.3e-70 270.4 172 72.1
Phvul.010G084400 Phaseolus vulgaris HOM05D006036 ORTHO05D007736 1.3e-70 270.4 207 66.2
TPR.G9852 Trifolium pratense HOM05D006036 ORTHO05D007736 2.3e-70 269.6 172 72.7
Medtr4g023550 Medicago truncatula HOM05D006036 ORTHO05D007736 3.0e-70 269.2 172 72.7
Sabra02G0115600 Salix brachista HOM05D006036 ORTHO05D007736 5.0e-70 268.5 176 72.2
CARHR171200 Cardamine hirsuta HOM05D006036 ORTHO05D007736 6.6e-70 268.1 199 68.3
MD02G1204100 Malus domestica HOM05D006036 ORTHO05D007736 1.1e-69 267.3 177 73.4
AL5G43130 Arabidopsis lyrata HOM05D006036 ORTHO05D007736 4.3e-69 265.4 199 66.8
AT3G60810 Arabidopsis thaliana HOM05D006036 ORTHO05D007736 5.6e-69 265.0 196 67.9
CSS0011162 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 7.3e-69 264.6 168 75.6
CSS0022013 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 7.3e-69 264.6 168 75.6
CANSAT56G2189 Cannabis sativa HOM05D006036 ORTHO05D007736 9.5e-69 264.2 229 60.3
AUR62004220 Chenopodium quinoa HOM05D006036 ORTHO05D007736 1.2e-68 263.8 155 78.1
arahy.Tifrunner.gnm1.ann1.B3VI1A Arachis hypogaea HOM05D006036 ORTHO05D007736 2.8e-68 262.7 171 73.7
Lj3g0008791 Lotus japonicus HOM05D006036 ORTHO05D007736 3.6e-68 262.3 172 69.8
Nitab4.5_0005372g0020 Nicotiana tabacum HOM05D006036 ORTHO05D007736 3.6e-68 262.3 155 78.7
Glyma.08G286100 Glycine max HOM05D006036 ORTHO05D007736 4.7e-68 261.9 172 72.1
A09p53070 Brassica napus HOM05D006036 ORTHO05D007736 6.2e-68 261.5 202 64.9
Sp5g02440 Schrenkiella parvula HOM05D006036 ORTHO05D007736 6.2e-68 261.5 195 68.2
BcaC07g40602 Brassica carinata HOM05D006036 ORTHO05D007736 1.8e-67 260.0 202 64.9
C08p35770 Brassica napus HOM05D006036 ORTHO05D007736 1.8e-67 260.0 202 64.9
BolC8t51167H Brassica oleracea HOM05D006036 ORTHO05D007736 3.1e-67 259.2 202 64.4
Carub.0005s2756 Capsella rubella HOM05D006036 ORTHO05D007736 3.1e-67 259.2 179 72.1
Aa31LG10G15050 Aethionema arabicum HOM05D006036 ORTHO05D007736 5.2e-67 258.5 200 66.0
ATR0810G113 Amborella trichopoda HOM05D006036 ORTHO05D007736 2.0e-66 256.5 190 63.2
THA.LOC104802443 Tarenaya hassleriana HOM05D006036 ORTHO05D007736 3.4e-66 255.8 200 64.0
BcaC07g42642 Brassica carinata HOM05D006036 ORTHO05D007736 9.8e-66 254.2 179 69.8
Atru.chr5.310 Acer truncatum HOM05D006036 ORTHO05D007736 3.7e-65 252.3 177 68.4
Thhalv10006234m.g Eutrema salsugineum HOM05D006036 ORTHO05D007736 4.9e-65 251.9 208 65.4
Ciclev10022362m.g Citrus clementina HOM05D006036 ORTHO05D007736 6.4e-65 251.5 156 78.2
BraA09t40733Z Brassica rapa HOM05D006036 ORTHO05D007736 1.1e-64 250.8 173 71.7
Mapoly0007s0216 Marchantia polymorpha HOM05D006036 ORTHO05D007736 9.2e-64 247.7 171 66.7
Medtr7g074920 Medicago truncatula HOM05D006036 ORTHO05D007736 9.2e-64 247.7 173 65.3
vmacro21008 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 3.5e-63 245.7 155 75.5
FAN10G0738 Fragaria x ananassa HOM05D006036 ORTHO05D007736 6.0e-63 245.0 153 75.8
vmacro21009 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 7.8e-63 244.6 159 72.3
Pp3c23_9860 Physcomitrium patens HOM05D006036 ORTHO05D007736 1.3e-62 243.8 232 56.0
AagrBONN_evm.TU.Sc2ySwM_117.1558 Anthoceros agrestis HOM05D006036 ORTHO05D007736 8.6e-62 241.1 169 65.7
arahy.Tifrunner.gnm1.ann1.Y8TVDJ Arachis hypogaea HOM05D006036 ORTHO05D007736 1.1e-61 240.7 154 74.7
SMO143G0045 Selaginella moellendorffii HOM05D006036 ORTHO05D007736 8.1e-60 234.6 151 68.9
PSO782G0421 Papaver somniferum HOM05D006036 ORTHO05D007736 1.7e-57 226.9 187 61.0
Hma1.2p1_1122F.1_g259290 Hydrangea macrophylla HOM05D006036 ORTHO05D007736 6.4e-57 224.9 174 64.4
PSO478G2400 Papaver somniferum HOM05D006036 ORTHO05D007736 1.1e-56 224.2 188 60.1
SGA_v2.0_scaffold153G37014 Striga asiatica HOM05D006036 ORTHO05D001464 1.9e-56 223.4 200 58.0
Gohir.D08G155400 Gossypium hirsutum HOM05D006036 ORTHO05D007736 3.5e-55 219.2 132 76.5
VMungo0251G0926 Vigna mungo HOM05D006036 ORTHO05D007736 9.5e-53 211.1 172 62.8
Nitab4.5_0000457g0290 Nicotiana tabacum HOM05D006036 ORTHO05D007736 3.2e-48 196.1 198 54.5
VMungo0331G0186 Vigna mungo HOM05D006036 ORTHO05D007736 3.2e-48 196.1 242 47.5
Cre11.g468750 Chlamydomonas reinhardtii HOM05D006036 ORTHO05D007736 7.8e-47 191.4 174 54.6
ClCG06G000370 Citrullus lanatus HOM05D006036 ORTHO05D007736 1.0e-46 191.0 176 56.8
COL.COLO4_12549 Corchorus olitorius HOM05D006036 ORTHO05D007736 1.1e-45 187.6 120 75.0
MELO3C035247.2 Cucumis melo HOM05D006036 ORTHO05D007736 4.7e-44 182.2 113 76.1
Peaxi162Scf00021g01720 Petunia axillaris HOM05D006036 ORTHO05D007736 1.5e-42 177.2 109 78.0
CAN.G388.12 Capsicum annuum HOM05D006036 ORTHO05D007736 2.1e-39 166.8 109 72.5
Migut.N01635 Erythranthe guttata HOM05D006036 ORTHO05D007736 2.5e-37 159.8 120 65.8
Glyma.09G269100 Glycine max HOM05D006036 ORTHO05D007736 1.3e-36 157.5 117 66.7
Lalb_Chr03g0039561 Lupinus albus HOM05D006036 ORTHO05D007736 4.8e-36 155.6 123 61.8
FAN06G1700 Fragaria x ananassa HOM05D006036 ORTHO05D007736 5.3e-35 152.1 95 77.9
MCO13G087 Micromonas commoda HOM05D006036 ORTHO05D007736 1.1e-32 144.4 167 47.3
Ca_07819_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 1.0e-30 137.9 91 70.3
Ca_19909_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 8.7e-30 134.8 90 65.6
FAN06G2896 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.5e-29 134.0 76 81.6
CBR_g54966 Chara braunii HOM05D006036 ORTHO05D007736 5.6e-29 132.1 83 72.3
Ciclev10033315m.g Citrus clementina HOM05D006036 ORTHO05D007736 8.4e-25 118.2 142 50.0
Gorai.007G091200 Gossypium raimondii HOM05D001611 ORTHO05D001464 1.4e-24 117.5 99 58.6
MELO3C034959.2 Cucumis melo HOM05D006036 ORTHO05D007736 4.2e-24 115.9 63 81.0
Gohir.D11G085366 Gossypium hirsutum HOM05D001611 ORTHO05D001464 2.7e-23 113.2 99 56.6
Psat3g116040 Pisum sativum HOM05D006036 ORTHO05D007736 1.0e-17 94.7 62 64.5
Lalb_Chr03g0039551 Lupinus albus HOM05D006036 ORTHO05D007736 2.9e-17 93.2 78 55.1
Lj1g0011795 Lotus japonicus HOM05D006036 ORTHO05D007736 7.1e-16 88.6 52 75.0
arahy.Tifrunner.gnm1.ann1.WD24C8 Arachis hypogaea HOM05D006036 ORTHO05D007736 2.7e-15 86.7 137 38.7
Gorai.004G161600 Gossypium raimondii HOM05D006036 ORTHO05D007736 5.7e-13 79.0 94 47.9
arahy.Tifrunner.gnm1.ann1.BW32E7 Arachis hypogaea HOM05D006036 ORTHO05D000587 3.7e-12 76.3 59 61.0


User provided reference genes

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