Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4975 Utricularia gibba HOM05D007323 ORTHO05D009238 1.7e-129 466.1 249 100.0
SGA_v2.0_scaffold20G09163 Striga asiatica HOM05D007323 ORTHO05D009238 6.2e-71 271.6 209 68.9
Migut.A00078 Erythranthe guttata HOM05D007323 ORTHO05D009238 5.8e-69 265.0 237 65.0
MSTRG.25986 Avicennia marina HOM05D007323 ORTHO05D009238 6.4e-68 261.5 242 64.9
Sopen08g017220 Solanum pennellii HOM05D007323 ORTHO05D009238 5.3e-62 241.9 207 62.8
Cc08_g01150 Coffea canephora HOM05D007323 ORTHO05D009238 6.9e-62 241.5 207 64.3
ECA234G0604 Erigeron canadensis HOM05D007323 ORTHO05D009238 4.5e-61 238.8 219 57.5
Lsat_1_v5_gn_5_79461 Lactuca sativa HOM05D007323 ORTHO05D009238 4.5e-61 238.8 216 60.2
COL.COLO4_21139 Corchorus olitorius HOM05D007323 ORTHO05D009238 5.8e-61 238.4 208 60.6
Manes.16G085700 Manihot esculenta HOM05D007323 ORTHO05D009238 5.8e-61 238.4 215 60.5
Dinv41843 Davidia involucrata HOM05D007323 ORTHO05D009238 7.6e-61 238.0 241 56.0
HanXRQChr10g0309971 Helianthus annuus HOM05D007323 ORTHO05D009238 9.9e-61 237.7 206 61.2
vmacro05236 Vaccinium macrocarpon HOM05D007323 ORTHO05D009238 8.4e-60 234.6 174 67.2
Actinidia03545 Actinidia chinensis HOM05D007323 ORTHO05D009238 3.2e-59 232.6 206 58.3
Nn8g38659 Nelumbo nucifera HOM05D007323 ORTHO05D009238 7.1e-59 231.5 206 59.2
Nitab4.5_0000446g0180 Nicotiana tabacum HOM05D007323 ORTHO05D009238 9.3e-59 231.1 208 62.5
Rhsim10G0107900 Rhododendron simsii HOM05D007323 ORTHO05D009238 9.3e-59 231.1 173 67.1
Nitab4.5_0002831g0040 Nicotiana tabacum HOM05D007323 ORTHO05D009238 1.6e-58 230.3 208 62.0
Thecc.09G063400 Theobroma cacao HOM05D007323 ORTHO05D009238 1.0e-57 227.6 208 58.2
TWI34G0887 Tripterygium wilfordii HOM05D007323 ORTHO05D009238 2.3e-57 226.5 206 59.2
Lalb_Chr08g0244811 Lupinus albus HOM05D007323 ORTHO05D009238 3.0e-57 226.1 206 57.3
GSVIVG01035470001 Vitis vinifera HOM05D007323 ORTHO05D009238 3.9e-57 225.7 178 62.9
Duzib150G1239 Durio zibethinus HOM05D007323 ORTHO05D009238 5.1e-57 225.3 208 57.2
Glyma.06G055900 Glycine max HOM05D007323 ORTHO05D009238 6.7e-57 224.9 206 61.7
Potri.006G220800 Populus trichocarpa HOM05D007323 ORTHO05D009238 8.7e-57 224.6 210 57.6
EL10Ac2g03780 Beta vulgaris HOM05D007323 ORTHO05D009238 2.5e-56 223.0 204 57.8
Ca_15835_v3 Cicer arietinum L. HOM05D007323 ORTHO05D009238 1.3e-55 220.7 216 56.0
PGR031G0894 Punica granatum HOM05D007323 ORTHO05D009238 1.3e-55 220.7 196 60.2
ClCG08G009880 Citrullus lanatus HOM05D007323 ORTHO05D009238 4.8e-55 218.8 206 60.7
Gorai.001G020100 Gossypium raimondii HOM05D007323 ORTHO05D009238 4.8e-55 218.8 210 58.6
Sed0017686 Sechium edule HOM05D007323 ORTHO05D009238 4.8e-55 218.8 204 60.3
Sc06g0001110 Simmondsia chinensis HOM05D007323 ORTHO05D009238 4.8e-55 218.8 209 56.9
VMungo1309G0522 Vigna mungo HOM05D007323 ORTHO05D009238 4.8e-55 218.8 207 58.9
Aqoxy7G01049 Aquilegia oxysepala HOM05D007323 ORTHO05D009238 6.2e-55 218.4 226 56.2
Cfa017873 Carpinus fangiana HOM05D007323 ORTHO05D009238 6.2e-55 218.4 204 58.3
Phvul.009G082000 Phaseolus vulgaris HOM05D007323 ORTHO05D009238 8.1e-55 218.0 207 58.5
Eucgr.B01965 Eucalyptus grandis HOM05D007323 ORTHO05D009238 1.1e-54 217.6 196 60.2
CsaV3_6G031970 Cucumis sativus L. HOM05D007323 ORTHO05D009238 1.4e-54 217.2 206 60.7
QL02p017014 Quercus lobata HOM05D007323 ORTHO05D009238 1.4e-54 217.2 196 59.7
CANSAT25G3877 Cannabis sativa HOM05D007323 ORTHO05D009238 1.8e-54 216.9 232 54.3
DCAR_007767 Daucus carota HOM05D007323 ORTHO05D009238 2.4e-54 216.5 249 53.8
CiPaw.16G068300 Carya illinoinensis HOM05D007323 ORTHO05D009238 3.1e-54 216.1 206 58.3
Sabra06G0170600 Salix brachista HOM05D007323 ORTHO05D009238 3.1e-54 216.1 250 51.2
Ciclev10009314m.g Citrus clementina HOM05D007323 ORTHO05D009238 6.9e-54 214.9 211 58.3
RcHm_v2.0_Chr6g0311811 Rosa chinensis HOM05D007323 ORTHO05D009238 9.0e-54 214.5 207 57.5
MELO3C011483.2 Cucumis melo HOM05D007323 ORTHO05D009238 1.2e-53 214.2 221 57.9
Lj1g0021270 Lotus japonicus HOM05D007323 ORTHO05D009238 1.2e-53 214.2 224 54.9
Atru.chr7.1847 Acer truncatum HOM05D007323 ORTHO05D009238 3.4e-53 212.6 173 62.4
FvH4_2g30980 Fragaria vesca HOM05D007323 ORTHO05D009238 3.4e-53 212.6 206 56.3
FAN20G2477 Fragaria x ananassa HOM05D007323 ORTHO05D009238 5.8e-53 211.8 206 56.8
FAN27G1709 Fragaria x ananassa HOM05D007323 ORTHO05D009238 5.8e-53 211.8 206 56.3
CDE05G0862 Ceratophyllum demersum HOM05D007323 ORTHO05D009238 7.6e-53 211.5 219 56.6
FAN24G0989 Fragaria x ananassa HOM05D007323 ORTHO05D009238 7.6e-53 211.5 206 56.3
Gohir.D07G019400 Gossypium hirsutum HOM05D007323 ORTHO05D009238 7.6e-53 211.5 210 57.6
PSO421G0353 Papaver somniferum HOM05D007323 ORTHO05D009238 9.9e-53 211.1 210 55.7
Hund03297 Selenicereus undatus HOM05D007323 ORTHO05D009238 1.7e-52 210.3 196 55.1
Medtr3g105050 Medicago truncatula HOM05D007323 ORTHO05D009238 2.9e-52 209.5 212 55.2
A09p55240 Brassica napus HOM05D007323 ORTHO05D009238 3.8e-52 209.1 235 52.8
THA.LOC104819519 Tarenaya hassleriana HOM05D007323 ORTHO05D009238 3.8e-52 209.1 204 55.9
TPR.G3557 Trifolium pratense HOM05D007323 ORTHO05D009238 3.8e-52 209.1 213 55.4
BcaC07g40825 Brassica carinata HOM05D007323 ORTHO05D009238 6.4e-52 208.4 232 53.0
C08p38170 Brassica napus HOM05D007323 ORTHO05D009238 6.4e-52 208.4 232 53.0
BolC8t51392H Brassica oleracea HOM05D007323 ORTHO05D009238 6.4e-52 208.4 232 53.0
BraA09t40931Z Brassica rapa HOM05D007323 ORTHO05D009238 6.4e-52 208.4 237 52.3
PSO063G6894 Papaver somniferum HOM05D007323 ORTHO05D009238 6.4e-52 208.4 200 56.5
ATR0598G133 Amborella trichopoda HOM05D007323 ORTHO05D009238 1.1e-51 207.6 175 61.7
Thhalv10002091m.g Eutrema salsugineum HOM05D007323 ORTHO05D009238 1.9e-51 206.8 209 57.9
Sp4g06990 Schrenkiella parvula HOM05D007323 ORTHO05D009238 1.9e-51 206.8 234 52.1
Prupe.1G404100 Prunus persica HOM05D007323 ORTHO05D009238 5.5e-51 205.3 207 57.0
arahy.Tifrunner.gnm1.ann1.7DEW7H Arachis hypogaea HOM05D007323 ORTHO05D009238 9.3e-51 204.5 196 55.6
BcaB08g35255 Brassica carinata HOM05D007323 ORTHO05D009238 2.1e-50 203.4 229 51.5
MD15G1049800 Malus domestica HOM05D007323 ORTHO05D009238 2.1e-50 203.4 219 55.3
Os03g0176700 Oryza sativa ssp. japonica HOM05D007323 ORTHO05D009238 1.0e-49 201.1 196 57.1
Aa31LG2G12250 Aethionema arabicum HOM05D007323 ORTHO05D009238 3.9e-49 199.1 211 55.9
AL4G18960 Arabidopsis lyrata HOM05D007323 ORTHO05D009238 6.7e-49 198.4 230 51.3
HPP92_024332 Vanilla planifolia HOM05D007323 ORTHO05D009238 6.7e-49 198.4 193 57.0
Gohir.A07G019600 Gossypium hirsutum HOM05D007323 ORTHO05D009238 1.1e-48 197.6 182 58.8
Haze_18294 Corylus avellana HOM05D007323 ORTHO05D009238 3.3e-48 196.1 254 46.9
Carub.0004s0625 Capsella rubella HOM05D007323 ORTHO05D009238 5.6e-48 195.3 216 54.2
Zm00001eb005760 Zea mays HOM05D007323 ORTHO05D009238 1.6e-47 193.7 197 56.3
arahy.Tifrunner.gnm1.ann1.287SRD Arachis hypogaea HOM05D007323 ORTHO05D009238 1.2e-45 187.6 202 53.0
A09p54710 Brassica napus HOM05D007323 ORTHO05D009238 1.0e-44 184.5 172 58.1
CARHR118450 Cardamine hirsuta HOM05D007323 ORTHO05D009238 2.2e-44 183.3 178 56.7
AagrBONN_evm.TU.Sc2ySwM_228.4439 Anthoceros agrestis HOM05D007323 ORTHO05D009238 1.1e-43 181.0 181 54.7
AT2G26340 Arabidopsis thaliana HOM05D007323 ORTHO05D009238 1.4e-43 180.6 236 48.7
Psat5g030560 Pisum sativum HOM05D007323 ORTHO05D009238 3.2e-43 179.5 161 57.1
SEGI_00918 Sequoiadendron giganteum HOM05D007323 ORTHO05D009238 3.2e-43 179.5 200 49.0
AUR62009079 Chenopodium quinoa HOM05D007323 ORTHO05D009238 2.7e-42 176.4 163 58.3
Peaxi162Scf00486g01025 Petunia axillaris HOM05D007323 ORTHO05D009238 8.7e-41 171.4 245 49.0
Pp3c4_13280 Physcomitrium patens HOM05D007323 ORTHO05D009238 2.5e-40 169.9 165 53.9
Eucgr.B01870 Eucalyptus grandis HOM05D007323 ORTHO05D009238 5.7e-40 168.7 134 67.2
SMO239G0030 Selaginella moellendorffii HOM05D007323 ORTHO05D009238 2.6e-37 159.8 200 47.5
Mapoly0001s0019 Marchantia polymorpha HOM05D007323 ORTHO05D009238 2.2e-36 156.8 177 48.0
AUR62020587 Chenopodium quinoa HOM05D007323 ORTHO05D009238 5.5e-35 152.1 207 45.9
TAR636G1368 Trochodendron aralioides HOM05D007323 ORTHO05D009238 3.7e-31 139.4 127 56.7
CSS0001075 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 1.5e-29 134.0 105 67.6
CSS0018719 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 1.5e-29 134.0 105 67.6
CBR_g19268 Chara braunii HOM05D007323 ORTHO05D009238 7.7e-29 131.7 178 42.7
Cpa.g.sc126.24 Carica papaya HOM05D007323 ORTHO05D009238 2.5e-27 126.7 105 65.7
MBI13_g42814_MAGBIO Magnolia biondii HOM05D007323 ORTHO05D009238 1.2e-26 124.4 329 32.5
Cre16.g684150 Chlamydomonas reinhardtii HOM05D007323 ORTHO05D009238 2.2e-15 87.0 174 35.6
MD08G1071400 Malus domestica HOM05D007323 ORTHO05D009238 1.3e-12 77.8 64 60.9
Solyc08g061800.3 Solanum lycopersicum HOM05D007323 ORTHO05D009238 3.6e-10 69.7 71 50.7
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 2.6e-08 63.5 120 34.2


User provided reference genes

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