Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4921 Utricularia gibba HOM05D008022 ORTHO05D010147 2.5e-68 262.3 165 100.0
MELO3C018685.2 Cucumis melo HOM05D008022 ORTHO05D010147 1.1e-12 77.4 55 67.3
Phvul.001G009600 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 1.1e-12 77.4 70 51.4
CsaV3_7G006070 Cucumis sativus L. HOM05D008022 ORTHO05D010147 2.5e-12 76.3 55 58.2
Sed0002960 Sechium edule HOM05D008022 ORTHO05D010147 7.4e-12 74.7 55 52.7
Nn5g29204 Nelumbo nucifera HOM05D008022 ORTHO05D010147 1.3e-11 73.9 75 52.0
CSS0048901 Camellia sinensis var. sinensis HOM05D008022 ORTHO05D010147 1.6e-11 73.6 51 56.9
Nitab4.5_0000493g0010 Nicotiana tabacum HOM05D008022 ORTHO05D010147 2.1e-11 73.2 49 57.1
Gohir.A05G188500 Gossypium hirsutum HOM05D008022 ORTHO05D010147 2.8e-11 72.8 51 54.9
Gohir.D05G191600 Gossypium hirsutum HOM05D008022 ORTHO05D010147 2.8e-11 72.8 51 54.9
Gorai.009G196900 Gossypium raimondii HOM05D008022 ORTHO05D010147 2.8e-11 72.8 51 54.9
Lalb_Chr08g0246011 Lupinus albus HOM05D008022 ORTHO05D010147 2.8e-11 72.8 75 44.0
arahy.Tifrunner.gnm1.ann1.RV6KDM Arachis hypogaea HOM05D008022 ORTHO05D010147 4.8e-11 72.0 70 48.6
Eucgr.F01845 Eucalyptus grandis HOM05D008022 ORTHO05D010147 4.8e-11 72.0 70 47.1
Glyma.17G255200 Glycine max HOM05D008022 ORTHO05D010147 8.1e-11 71.2 69 46.4
Atru.chr13.362 Acer truncatum HOM05D008022 ORTHO05D010147 1.1e-10 70.9 70 47.1
Lj5g0000972 Lotus japonicus HOM05D008022 ORTHO05D010147 1.1e-10 70.9 55 50.9
TWI12G0111 Tripterygium wilfordii HOM05D008022 ORTHO05D010147 1.1e-10 70.9 64 50.0
Cpa.g.sc140.17 Carica papaya HOM05D008022 ORTHO05D010147 1.4e-10 70.5 58 58.6
Psat6g005360 Pisum sativum HOM05D008022 ORTHO05D010147 1.4e-10 70.5 48 58.3
CiPaw.08G062600 Carya illinoinensis HOM05D008022 ORTHO05D010147 1.8e-10 70.1 78 43.6
Medtr1g023270 Medicago truncatula HOM05D008022 ORTHO05D010147 1.8e-10 70.1 139 50.4
TPR.G40293 Trifolium pratense HOM05D008022 ORTHO05D010147 3.1e-10 69.3 75 44.0
CANSAT25G1466 Cannabis sativa HOM05D008022 ORTHO05D010147 4.0e-10 68.9 54 53.7
Cfa013902 Carpinus fangiana HOM05D002906 ORTHO05D003211 4.0e-10 68.9 52 55.8
Potri.005G234601 Populus trichocarpa HOM05D008022 ORTHO05D010147 4.0e-10 68.9 51 52.9
Lj1g0009874 Lotus japonicus HOM05D008022 ORTHO05D010147 9.0e-10 67.8 79 39.2
CiPaw.07G154400 Carya illinoinensis HOM05D008022 ORTHO05D010147 1.5e-09 67.0 43 60.5
Glyma.14G216600 Glycine max HOM05D008022 ORTHO05D010147 1.5e-09 67.0 44 56.8
MD15G1017600 Malus domestica HOM05D008022 ORTHO05D010147 1.5e-09 67.0 54 51.9
Prupe.1G370900 Prunus persica HOM05D008022 ORTHO05D010147 2.6e-09 66.2 44 68.2
PGR031G0261 Punica granatum HOM05D008022 ORTHO05D010147 2.6e-09 66.2 55 52.7
arahy.Tifrunner.gnm1.ann1.QUSF5W Arachis hypogaea HOM05D008022 ORTHO05D010147 3.4e-09 65.9 48 56.2
EL10Ac1g00558 Beta vulgaris HOM05D008022 ORTHO05D010147 3.4e-09 65.9 47 55.3
Cc10_g02120 Coffea canephora HOM05D008022 ORTHO05D010147 3.4e-09 65.9 43 55.8
ECA236G3926 Erigeron canadensis HOM05D008022 ORTHO05D010147 3.4e-09 65.9 77 41.6
Manes.05G152650 Manihot esculenta HOM05D008022 ORTHO05D010147 3.4e-09 65.9 56 51.8
Medtr3g113080 Medicago truncatula HOM05D008022 ORTHO05D010147 3.4e-09 65.9 74 44.6
Duzib041G0305 Durio zibethinus HOM05D008022 ORTHO05D010147 5.8e-09 65.1 39 64.1
Lsat_1_v5_gn_7_91921 Lactuca sativa HOM05D008022 ORTHO05D010147 5.8e-09 65.1 76 42.1
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 1.0e-08 64.3 33 72.7
PSO541G2481 Papaver somniferum HOM05D008022 ORTHO05D010147 1.0e-08 64.3 48 54.2
Lalb_Chr22g0354471 Lupinus albus HOM05D008022 ORTHO05D010147 1.3e-08 63.9 71 43.7
FvH4_2g39010 Fragaria vesca HOM05D008022 ORTHO05D010147 2.9e-08 62.8 43 55.8
VMungo1309G0619 Vigna mungo HOM05D002906 ORTHO05D003211 3.8e-08 62.4 48 54.2
arahy.Tifrunner.gnm1.ann1.0AGT2R Arachis hypogaea HOM05D008022 ORTHO05D010147 3.2e-07 59.3 48 50.0
BcaC08g47037 Brassica carinata HOM05D008022 ORTHO05D010147 3.2e-07 59.3 61 42.6
BraA07t31648Z Brassica rapa HOM05D008022 ORTHO05D010147 3.2e-07 59.3 61 42.6
Aqoxy6G02393 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 7.1e-07 58.2 44 52.3
BcaC08g47337 Brassica carinata HOM05D008022 ORTHO05D010147 7.1e-07 58.2 61 41.0
BcaC08g47338 Brassica carinata HOM05D008022 ORTHO05D010147 7.1e-07 58.2 61 41.0
DCAR_017590 Daucus carota HOM05D000043 ORTHO05D000223 2.1e-06 56.6 49 51.0
A07p41120 Brassica napus HOM05D008022 ORTHO05D010147 2.7e-06 56.2 61 41.0
BcaC08g45567 Brassica carinata HOM05D008022 ORTHO05D010147 7.9e-06 54.7 59 42.4
C06p32520 Brassica napus HOM05D008022 ORTHO05D010147 7.9e-06 54.7 59 42.4
BolC6t38374H Brassica oleracea HOM05D008022 ORTHO05D010147 7.9e-06 54.7 59 42.4
BraA07t30517Z Brassica rapa HOM05D008022 ORTHO05D010147 7.9e-06 54.7 59 40.7


User provided reference genes

Program Settings