Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 4.4e-46 187.6 94 100.0
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 9.0e-31 136.7 94 71.3
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 6.4e-29 130.6 90 68.9
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.1e-28 129.8 93 66.7
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.9e-28 129.0 93 66.7
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 1.9e-28 129.0 89 67.4
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 2.5e-28 128.6 89 67.4
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 3.2e-28 128.3 94 66.0
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 7.1e-28 127.1 89 68.5
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 7.1e-28 127.1 89 67.4
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 7.1e-28 127.1 89 64.0
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 7.1e-28 127.1 92 63.0
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 9.3e-28 126.7 92 65.2
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 9.3e-28 126.7 89 66.3
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 9.3e-28 126.7 93 64.5
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 9.3e-28 126.7 89 66.3
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 9.3e-28 126.7 88 63.6
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.2e-27 126.3 85 70.6
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.2e-27 126.3 86 67.4
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 1.6e-27 125.9 94 62.8
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 1.6e-27 125.9 94 64.9
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 1.6e-27 125.9 94 64.9
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 1.6e-27 125.9 94 64.9
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 1.6e-27 125.9 84 67.9
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 3.5e-27 124.8 88 64.8
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 6.0e-27 124.0 88 64.8
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 7.9e-27 123.6 91 61.5
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 7.9e-27 123.6 95 63.2
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 1.0e-26 123.2 94 59.6
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 1.0e-26 123.2 90 63.3
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 1.3e-26 122.9 97 62.9
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 1.3e-26 122.9 94 63.8
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 1.8e-26 122.5 94 62.8
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 2.3e-26 122.1 93 61.3
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 3.0e-26 121.7 93 61.3
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 3.0e-26 121.7 88 62.5
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 3.0e-26 121.7 88 62.5
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 3.0e-26 121.7 82 68.3
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 3.0e-26 121.7 94 60.6
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 3.9e-26 121.3 89 61.8
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 3.9e-26 121.3 89 65.2
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 6.7e-26 120.6 87 59.8
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 6.7e-26 120.6 93 61.3
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 8.7e-26 120.2 93 60.2
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 8.7e-26 120.2 88 64.8
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 8.7e-26 120.2 94 60.6
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 8.7e-26 120.2 95 65.3
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 1.1e-25 119.8 88 61.4
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 1.1e-25 119.8 93 59.1
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 1.1e-25 119.8 89 62.9
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 1.5e-25 119.4 89 62.9
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 1.5e-25 119.4 87 59.8
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 1.5e-25 119.4 87 59.8
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 1.9e-25 119.0 90 61.1
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 3.3e-25 118.2 93 59.1
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 3.3e-25 118.2 84 59.5
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 3.3e-25 118.2 93 61.3
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 5.6e-25 117.5 99 58.6
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 5.6e-25 117.5 88 61.4
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 7.4e-25 117.1 89 62.9
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 9.6e-25 116.7 88 62.5
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 9.6e-25 116.7 93 59.1
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 9.6e-25 116.7 93 58.1
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 1.3e-24 116.3 88 63.6
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 1.3e-24 116.3 86 66.3
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 1.6e-24 115.9 93 58.1
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 1.6e-24 115.9 93 57.0
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 2.1e-24 115.5 92 58.7
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 2.8e-24 115.2 88 61.4
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 3.7e-24 114.8 86 64.0
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 6.2e-24 114.0 82 63.4
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 8.2e-24 113.6 83 61.4
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 8.2e-24 113.6 86 64.0
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 8.2e-24 113.6 83 59.0
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 1.1e-23 113.2 89 58.4
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 1.1e-23 113.2 86 62.8
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 1.4e-23 112.8 88 59.1
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 1.4e-23 112.8 86 60.5
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 1.8e-23 112.5 89 59.6
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 1.8e-23 112.5 88 60.2
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 1.8e-23 112.5 89 59.6
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 1.8e-23 112.5 86 64.0
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 2.4e-23 112.1 93 55.9
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 2.4e-23 112.1 91 52.7
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 4.0e-23 111.3 84 60.7
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 4.0e-23 111.3 84 60.7
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 4.0e-23 111.3 84 60.7
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 4.0e-23 111.3 84 60.7
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 4.0e-23 111.3 84 60.7
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 4.0e-23 111.3 95 58.9
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 5.3e-23 110.9 80 63.8
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 9.0e-23 110.2 81 59.3
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 9.0e-23 110.2 90 55.6
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 1.2e-22 109.8 89 59.6
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 1.5e-22 109.4 87 58.6
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 3.4e-22 108.2 94 55.3
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 5.8e-22 107.5 92 57.6
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 1.3e-21 106.3 96 53.1
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 2.9e-21 105.1 81 55.6
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 6.5e-21 104.0 94 48.9
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 1.1e-20 103.2 93 54.8
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 4.2e-20 101.3 94 47.9
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 7.1e-20 100.5 88 51.1
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 1.2e-19 99.8 74 59.5
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 1.6e-19 99.4 77 61.0
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 7.4e-17 90.5 91 48.4
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 1.6e-16 89.4 63 69.8
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 8.2e-16 87.0 90 42.2
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 1.4e-15 86.3 85 48.2
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 2.7e-11 72.0 73 46.6
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 4.6e-11 71.2 84 40.5
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 1.8e-10 69.3 84 41.7
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 3.0e-10 68.6 82 37.8
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 1.7e-08 62.8 80 38.8


User provided reference genes

Program Settings