Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 5.6e-121 437.6 215 100.0
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 2.8e-27 126.3 90 72.2
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 4.7e-27 125.6 90 71.1
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 6.2e-27 125.2 90 66.7
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 8.1e-27 124.8 90 71.1
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.1e-26 124.4 90 72.2
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.1e-26 124.4 90 72.2
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 1.4e-26 124.0 90 70.0
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 2.4e-26 123.2 88 70.5
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 2.4e-26 123.2 90 68.9
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 2.4e-26 123.2 90 67.8
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 3.1e-26 122.9 90 68.9
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 4.0e-26 122.5 90 68.9
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 5.2e-26 122.1 90 70.0
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 6.9e-26 121.7 90 68.9
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 6.9e-26 121.7 90 70.0
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 6.9e-26 121.7 90 67.8
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 6.9e-26 121.7 90 71.1
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 6.9e-26 121.7 86 72.1
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 6.9e-26 121.7 90 71.1
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 8.9e-26 121.3 90 70.0
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 8.9e-26 121.3 86 69.8
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 8.9e-26 121.3 90 67.8
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 8.9e-26 121.3 90 70.0
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 8.9e-26 121.3 86 73.3
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 1.2e-25 120.9 90 70.0
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 1.2e-25 120.9 90 67.8
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 1.2e-25 120.9 90 67.8
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 1.2e-25 120.9 90 70.0
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 1.2e-25 120.9 90 70.0
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 1.2e-25 120.9 88 67.0
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 1.5e-25 120.6 90 67.8
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 2.0e-25 120.2 90 67.8
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 2.0e-25 120.2 90 67.8
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 2.0e-25 120.2 90 67.8
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 2.0e-25 120.2 84 70.2
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 2.0e-25 120.2 86 72.1
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 2.6e-25 119.8 90 67.8
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 2.6e-25 119.8 91 69.2
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 2.6e-25 119.8 90 67.8
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 2.6e-25 119.8 86 68.6
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 2.6e-25 119.8 86 68.6
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 3.4e-25 119.4 90 66.7
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 3.4e-25 119.4 88 70.5
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 4.4e-25 119.0 90 67.8
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 4.4e-25 119.0 90 66.7
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 4.4e-25 119.0 112 60.7
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 4.4e-25 119.0 90 64.4
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 5.8e-25 118.6 86 65.1
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 5.8e-25 118.6 86 67.4
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 7.6e-25 118.2 90 68.9
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 7.6e-25 118.2 86 67.4
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 7.6e-25 118.2 90 65.6
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 7.6e-25 118.2 90 66.7
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 7.6e-25 118.2 90 66.7
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 9.9e-25 117.9 90 70.0
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 9.9e-25 117.9 90 68.9
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 9.9e-25 117.9 86 67.4
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 9.9e-25 117.9 87 71.3
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 1.3e-24 117.5 86 68.6
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 1.3e-24 117.5 90 63.3
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 1.7e-24 117.1 86 67.4
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 1.7e-24 117.1 88 65.9
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 2.2e-24 116.7 90 63.3
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 2.2e-24 116.7 90 65.6
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 2.2e-24 116.7 86 67.4
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 2.9e-24 116.3 88 64.8
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 2.9e-24 116.3 90 64.4
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 3.8e-24 115.9 90 68.9
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 3.8e-24 115.9 88 63.6
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 4.9e-24 115.5 90 63.3
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 4.9e-24 115.5 90 66.7
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 6.4e-24 115.2 97 64.9
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 6.4e-24 115.2 90 66.7
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 6.4e-24 115.2 90 64.4
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 6.4e-24 115.2 86 68.6
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 1.4e-23 114.0 90 66.7
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 1.9e-23 113.6 87 66.7
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 1.9e-23 113.6 90 65.6
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 2.4e-23 113.2 86 65.1
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 2.4e-23 113.2 91 68.1
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 2.4e-23 113.2 91 68.1
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 2.4e-23 113.2 90 63.3
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 2.4e-23 113.2 90 65.6
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 2.4e-23 113.2 90 64.4
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 3.2e-23 112.8 89 66.3
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 4.2e-23 112.5 90 64.4
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 5.4e-23 112.1 84 67.9
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 5.4e-23 112.1 86 64.0
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 7.1e-23 111.7 88 65.9
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 7.1e-23 111.7 90 64.4
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 1.6e-22 110.5 91 67.0
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 1.6e-22 110.5 101 57.4
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 3.5e-22 109.4 89 61.8
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 4.6e-22 109.0 87 65.5
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 1.3e-21 107.5 94 62.8
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 3.9e-21 105.9 84 61.9
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 1.5e-20 104.0 97 57.7
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 1.3e-19 100.9 120 50.8
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 6.2e-19 98.6 72 69.4
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 1.4e-18 97.4 70 70.0
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 2.4e-18 96.7 86 64.0
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 3.1e-18 96.3 86 62.8
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 4.0e-18 95.9 69 71.0
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 5.3e-18 95.5 68 70.6
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 9.0e-18 94.7 63 74.6
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 1.5e-17 94.0 70 71.4
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.3e-16 90.9 57 77.2
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 2.2e-16 90.1 70 65.7
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 3.8e-16 89.4 57 73.7
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.9e-15 87.0 65 69.2
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 1.9e-15 87.0 80 61.2
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 3.2e-15 86.3 69 62.3
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 3.2e-15 86.3 89 53.9
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 1.6e-14 84.0 55 70.9
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 7.9e-14 81.6 80 58.8
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 1.0e-13 81.3 63 61.9
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 3.0e-13 79.7 89 50.6
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 5.1e-13 79.0 67 64.2
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 1.9e-12 77.0 77 58.4
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 9.6e-12 74.7 93 45.2
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 2.6e-09 66.6 53 62.3
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 3.5e-06 56.2 47 55.3


User provided reference genes

Program Settings