Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4827 Utricularia gibba HOM05D002293 ORTHO05D005475 4.2e-125 451.4 239 100.0
MSTRG.24489 Avicennia marina HOM05D002293 ORTHO05D005475 1.5e-98 363.2 244 78.7
Migut.N02943 Erythranthe guttata HOM05D002293 ORTHO05D005475 1.4e-96 356.7 244 76.6
Oeu046075.1 Olea europaea HOM05D002293 ORTHO05D005475 6.5e-94 347.8 244 76.2
SalBow6G4022 Salvia bowleyana HOM05D002293 ORTHO05D005475 4.7e-92 341.7 245 74.3
GSVIVG01022249001 Vitis vinifera HOM05D002293 ORTHO05D005475 8.0e-92 340.9 243 75.3
Hma1.2p1_2282F.1_g318820 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 1.8e-91 339.7 244 75.4
Dinv41022 Davidia involucrata HOM05D002293 ORTHO05D005475 1.5e-90 336.7 244 73.8
Hma1.2p1_0358F.1_g134890 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 2.6e-90 335.9 244 74.6
Nn3g18603 Nelumbo nucifera HOM05D002293 ORTHO05D005475 4.4e-90 335.1 243 74.1
Dinv42674 Davidia involucrata HOM05D002293 ORTHO05D005475 3.7e-89 332.0 243 72.0
Nn5g28871 Nelumbo nucifera HOM05D002293 ORTHO05D005475 1.1e-88 330.5 240 74.2
Actinidia12214 Actinidia chinensis HOM05D002293 ORTHO05D005475 1.4e-88 330.1 243 72.8
SGA_v2.0_scaffold54G19692 Striga asiatica HOM05D002293 ORTHO05D005475 1.8e-88 329.7 243 75.3
Cfa002767 Carpinus fangiana HOM05D002293 ORTHO05D005475 2.4e-88 329.3 243 73.3
Manes.12G143700 Manihot esculenta HOM05D002293 ORTHO05D005475 2.4e-88 329.3 243 73.3
Sc03g0004490 Simmondsia chinensis HOM05D002293 ORTHO05D005475 2.4e-88 329.3 243 72.4
Actinidia05381 Actinidia chinensis HOM05D002293 ORTHO05D005475 3.1e-88 328.9 243 72.4
CiPaw.04G090200 Carya illinoinensis HOM05D002293 ORTHO05D005475 4.1e-88 328.6 245 72.7
Ciclev10026373m.g Citrus clementina HOM05D002293 ORTHO05D005475 4.1e-88 328.6 243 73.3
Gohir.A11G054000 Gossypium hirsutum HOM05D002293 ORTHO05D005475 5.4e-88 328.2 243 73.3
Gohir.D11G057500 Gossypium hirsutum HOM05D002293 ORTHO05D005475 5.4e-88 328.2 243 73.3
PGR102G1541 Punica granatum HOM05D002293 ORTHO05D005475 9.1e-88 327.4 243 72.0
Eucgr.H04880 Eucalyptus grandis HOM05D002293 ORTHO05D005475 1.6e-87 326.6 243 72.4
Sed0002744 Sechium edule HOM05D002293 ORTHO05D005475 1.6e-87 326.6 241 73.0
CiPaw.03G133000 Carya illinoinensis HOM05D002293 ORTHO05D005475 2.0e-87 326.2 243 73.3
Duzib264G1168 Durio zibethinus HOM05D002293 ORTHO05D005475 2.7e-87 325.9 243 72.0
CsaV3_6G042260 Cucumis sativus L. HOM05D002293 ORTHO05D005475 4.5e-87 325.1 243 72.0
Haze_25060 Corylus avellana HOM05D002293 ORTHO05D005475 5.9e-87 324.7 243 72.4
ClCG01G015980 Citrullus lanatus HOM05D002293 ORTHO05D005475 1.0e-86 323.9 226 75.7
Gorai.007G062700 Gossypium raimondii HOM05D002293 ORTHO05D005475 1.3e-86 323.6 243 72.4
Prupe.6G169300 Prunus persica HOM05D002293 ORTHO05D005475 1.3e-86 323.6 244 73.4
Thecc.01G115200 Theobroma cacao HOM05D002293 ORTHO05D005475 1.3e-86 323.6 243 72.0
Lsat_1_v5_gn_9_42461 Lactuca sativa HOM05D002293 ORTHO05D005475 1.7e-86 323.2 239 72.0
MD01G1021000 Malus domestica HOM05D002293 ORTHO05D005475 1.7e-86 323.2 244 74.2
Aqoxy6G00441 Aquilegia oxysepala HOM05D002293 ORTHO05D005475 2.9e-86 322.4 244 72.5
MD15G1331100 Malus domestica HOM05D002293 ORTHO05D005475 3.8e-86 322.0 244 73.8
CSS0016943 Camellia sinensis var. sinensis HOM05D002293 ORTHO05D005475 5.0e-86 321.6 244 71.7
ECA247G2680 Erigeron canadensis HOM05D002293 ORTHO05D005475 5.0e-86 321.6 240 72.9
Atru.chr4.451 Acer truncatum HOM05D002293 ORTHO05D005475 1.1e-85 320.5 243 72.4
vmacro08972 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 1.1e-85 320.5 243 72.0
TWI75G0492 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 1.5e-85 320.1 243 72.8
QL06p031785 Quercus lobata HOM05D002293 ORTHO05D005475 2.5e-85 319.3 242 71.9
Cpa.g.sc72.4 Carica papaya HOM05D002293 ORTHO05D005475 4.2e-85 318.5 242 71.5
SGA_v2.0_scaffold364G49965 Striga asiatica HOM05D002293 ORTHO05D005475 7.2e-85 317.8 317 57.7
TWI31G0415 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 9.5e-85 317.4 243 72.0
Glyma.05G184800 Glycine max HOM05D002293 ORTHO05D005475 1.2e-84 317.0 244 72.1
PSO675G2787 Papaver somniferum HOM05D002293 ORTHO05D005475 1.6e-84 316.6 244 71.3
HanXRQChr02g0042411 Helianthus annuus HOM05D002293 ORTHO05D005475 2.1e-84 316.2 219 76.3
HanXRQChr04g0115601 Helianthus annuus HOM05D002293 ORTHO05D005475 2.1e-84 316.2 215 78.1
CANSAT01G0963 Cannabis sativa HOM05D002293 ORTHO05D005475 2.8e-84 315.8 243 70.8
ATR0736G207 Amborella trichopoda HOM05D002293 ORTHO05D005475 3.6e-84 315.5 243 70.0
PSO541G6166 Papaver somniferum HOM05D002293 ORTHO05D005475 6.1e-84 314.7 244 70.5
RcHm_v2.0_Chr2g0117231 Rosa chinensis HOM05D002293 ORTHO05D005475 1.0e-83 313.9 244 71.3
Glyma.08G142800 Glycine max HOM05D002293 ORTHO05D005475 2.3e-83 312.8 244 70.9
Thhalv10000307m.g Eutrema salsugineum HOM05D002293 ORTHO05D005475 6.8e-83 311.2 243 67.9
Gohir.A11G196900 Gossypium hirsutum HOM05D002293 ORTHO05D005475 6.8e-83 311.2 243 71.2
Sp4g00960 Schrenkiella parvula HOM05D002293 ORTHO05D005475 8.9e-83 310.8 243 68.3
Gohir.D11G228400 Gossypium hirsutum HOM05D002293 ORTHO05D005475 1.2e-82 310.5 243 70.0
BcaC02g08759 Brassica carinata HOM05D002293 ORTHO05D005475 1.5e-82 310.1 243 68.7
C04p50970 Brassica napus HOM05D002293 ORTHO05D005475 1.5e-82 310.1 243 68.7
AT2G21870 Arabidopsis thaliana HOM05D002293 ORTHO05D005475 2.0e-82 309.7 243 67.1
BcaB06g27791 Brassica carinata HOM05D002293 ORTHO05D005475 2.0e-82 309.7 243 67.9
BraA04t17281Z Brassica rapa HOM05D002293 ORTHO05D005475 2.0e-82 309.7 243 67.9
BcaB08g35009 Brassica carinata HOM05D002293 ORTHO05D005475 4.4e-82 308.5 243 67.9
Aa31LG7G14740 Aethionema arabicum HOM05D002293 ORTHO05D005475 7.5e-82 307.8 243 67.1
Potri.007G079500 Populus trichocarpa HOM05D002293 ORTHO05D005475 7.5e-82 307.8 243 67.9
Dinv19470 Davidia involucrata HOM05D002293 ORTHO05D005475 9.8e-82 307.4 222 74.8
A04p16460 Brassica napus HOM05D002293 ORTHO05D005475 1.3e-81 307.0 244 68.0
Lj2A567T21 Lonicera japonica HOM05D002293 ORTHO05D005475 1.3e-81 307.0 196 80.1
Hund19634 Selenicereus undatus HOM05D002293 ORTHO05D005475 1.3e-81 307.0 240 69.6
VMungo0251G0649 Vigna mungo HOM05D002293 ORTHO05D005475 1.7e-81 306.6 244 69.3
CARHR112910 Cardamine hirsuta HOM05D002293 ORTHO05D005475 2.2e-81 306.2 243 67.1
PGSC0003DMG400025052 Solanum tuberosum HOM05D002293 ORTHO05D005475 2.8e-81 305.8 244 68.0
C08p41150 Brassica napus HOM05D002293 ORTHO05D005475 3.7e-81 305.4 243 67.5
BolC4t26688H Brassica oleracea HOM05D002293 ORTHO05D005475 3.7e-81 305.4 248 66.5
Sopen04g028170 Solanum pennellii HOM05D002293 ORTHO05D005475 3.7e-81 305.4 244 67.6
BraA09t41184Z Brassica rapa HOM05D002293 ORTHO05D005475 4.9e-81 305.1 244 66.4
Rhsim08G0005300 Rhododendron simsii HOM05D002293 ORTHO05D005475 4.9e-81 305.1 284 61.6
Solyc04g072047.1 Solanum lycopersicum HOM05D002293 ORTHO05D005475 4.9e-81 305.1 244 67.2
Lj4g0016673 Lotus japonicus HOM05D002293 ORTHO05D005475 8.3e-81 304.3 244 69.7
TAR376G0974 Trochodendron aralioides HOM05D002293 ORTHO05D005475 1.1e-80 303.9 197 80.7
Phvul.002G265700 Phaseolus vulgaris HOM05D002293 ORTHO05D005475 1.4e-80 303.5 244 68.9
A09p57920 Brassica napus HOM05D002293 ORTHO05D005475 1.8e-80 303.1 244 66.4
FvH4_1g22890 Fragaria vesca HOM05D002293 ORTHO05D005475 1.8e-80 303.1 243 69.1
Nitab4.5_0004252g0010 Nicotiana tabacum HOM05D002293 ORTHO05D005475 1.8e-80 303.1 259 65.3
AUR62003295 Chenopodium quinoa HOM05D002293 ORTHO05D005475 3.1e-80 302.4 243 67.9
Carub.0004s0090 Capsella rubella HOM05D002293 ORTHO05D005475 4.1e-80 302.0 243 66.3
Nitab4.5_0001000g0170 Nicotiana tabacum HOM05D002293 ORTHO05D005475 4.1e-80 302.0 259 65.3
THA.LOC104824852 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 4.1e-80 302.0 243 66.7
HPP92_010855 Vanilla planifolia HOM05D002293 ORTHO05D005475 5.4e-80 301.6 246 68.7
EL10Ac6g14774 Beta vulgaris HOM05D002293 ORTHO05D005475 9.2e-80 300.8 243 67.1
CAN.G1252.8 Capsicum annuum HOM05D002293 ORTHO05D005475 9.2e-80 300.8 234 69.2
Lsat_1_v5_gn_1_5861 Lactuca sativa HOM05D002293 ORTHO05D005475 9.2e-80 300.8 199 79.9
Lalb_Chr07g0184761 Lupinus albus HOM05D002293 ORTHO05D005475 9.2e-80 300.8 243 66.7
arahy.Tifrunner.gnm1.ann1.GC7XSK Arachis hypogaea HOM05D002293 ORTHO05D005475 1.2e-79 300.4 244 67.6
Oeu061454.1 Olea europaea HOM05D002293 ORTHO05D005475 1.2e-79 300.4 279 60.9
Lj7A386T88 Lonicera japonica HOM05D002293 ORTHO05D005475 1.6e-79 300.1 196 79.6
THA.LOC104804134 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 1.6e-79 300.1 243 67.5
BcaC07g41114 Brassica carinata HOM05D002293 ORTHO05D005475 2.0e-79 299.7 243 66.7
BolC8t51682H Brassica oleracea HOM05D002293 ORTHO05D005475 2.0e-79 299.7 243 66.7
THA.LOC104807725 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 2.0e-79 299.7 243 65.4
Duzib187G0135 Durio zibethinus HOM05D002293 ORTHO05D005475 2.7e-79 299.3 196 80.6
Nn2g12418 Nelumbo nucifera HOM05D002293 ORTHO05D005475 4.5e-79 298.5 243 68.7
Potri.005G085500 Populus trichocarpa HOM05D002293 ORTHO05D005475 5.9e-79 298.1 243 67.1
Sabra07G0066700 Salix brachista HOM05D002293 ORTHO05D005475 5.9e-79 298.1 226 70.4
AUR62027167 Chenopodium quinoa HOM05D002293 ORTHO05D005475 1.7e-78 296.6 226 69.9
DCAR_019970 Daucus carota HOM05D002293 ORTHO05D005475 2.3e-78 296.2 234 68.8
Sc16g0004130 Simmondsia chinensis HOM05D002293 ORTHO05D005475 2.3e-78 296.2 196 78.1
Medtr8g092040 Medicago truncatula HOM05D002293 ORTHO05D005475 2.9e-78 295.8 245 67.8
MELO3C007468.2 Cucumis melo HOM05D002293 ORTHO05D005475 1.9e-77 293.1 196 77.6
Lalb_Chr12g0203481 Lupinus albus HOM05D002293 ORTHO05D005475 1.9e-77 293.1 233 68.7
Ca_17689_v3 Cicer arietinum L. HOM05D002293 ORTHO05D005475 4.3e-77 292.0 244 68.0
Duzib147G0641 Durio zibethinus HOM05D002293 ORTHO05D005475 4.3e-77 292.0 218 72.0
Ah.03g141640 Amaranthus hybridus HOM05D002293 ORTHO05D005475 1.0e-75 287.3 225 69.8
TPR.G20796 Trifolium pratense HOM05D002293 ORTHO05D005475 1.4e-75 287.0 246 68.3
FAN23G0553 Fragaria x ananassa HOM05D002293 ORTHO05D005475 2.3e-75 286.2 197 76.6
FAN26G3412 Fragaria x ananassa HOM05D002293 ORTHO05D005475 3.0e-75 285.8 198 75.8
Ah.02g125930 Amaranthus hybridus HOM05D002293 ORTHO05D005475 8.9e-75 284.3 196 74.5
FAN28G2749 Fragaria x ananassa HOM05D002293 ORTHO05D005475 8.9e-75 284.3 197 76.6
arahy.Tifrunner.gnm1.ann1.LE5EW2 Arachis hypogaea HOM05D002293 ORTHO05D005475 1.2e-74 283.9 280 58.9
Gorai.007G246300 Gossypium raimondii HOM05D002293 ORTHO05D005475 1.2e-74 283.9 222 70.3
FAN19G1282 Fragaria x ananassa HOM05D002293 ORTHO05D005475 1.5e-74 283.5 198 75.8
Zm00001eb231220 Zea mays HOM05D002293 ORTHO05D005475 3.4e-74 282.3 244 63.5
Zm00001eb209000 Zea mays HOM05D002293 ORTHO05D005475 4.4e-74 282.0 244 63.5
AL4G11180 Arabidopsis lyrata HOM05D002293 ORTHO05D005475 2.4e-72 276.2 196 70.9
Sabra05G0070400 Salix brachista HOM05D002293 ORTHO05D005475 7.0e-72 274.6 292 55.8
Glyma.14G174100 Glycine max HOM05D002293 ORTHO05D005475 8.9e-67 257.7 175 77.7
TAR381G0840 Trochodendron aralioides HOM05D002293 ORTHO05D005475 3.9e-62 242.3 181 71.3
Psat0s281g0080 Pisum sativum HOM05D002293 ORTHO05D005475 5.6e-61 238.4 244 57.8
COL.COLO4_10988 Corchorus olitorius HOM05D002293 ORTHO05D005475 7.3e-61 238.0 188 64.9
Hund03526 Selenicereus undatus HOM05D002293 ORTHO05D005475 2.0e-58 229.9 222 61.3
TAR625G1205 Trochodendron aralioides HOM05D002293 ORTHO05D005475 4.9e-57 225.3 196 64.3
Peaxi162Scf17813g00005 Petunia axillaris HOM05D002293 ORTHO05D005475 1.1e-56 224.2 155 75.5
Haze_25047 Corylus avellana HOM05D002293 ORTHO05D005475 1.1e-51 207.6 135 79.3
CDE04G0337 Ceratophyllum demersum HOM05D002293 ORTHO05D005475 1.2e-50 204.1 225 54.2
Zm00001eb114730 Zea mays HOM05D002293 ORTHO05D005475 8.4e-49 198.0 155 65.8
Lalb_Chr13g0296261 Lupinus albus HOM05D002293 ORTHO05D005475 4.6e-39 165.6 112 75.9
Rhsim10G0148500 Rhododendron simsii HOM05D002293 ORTHO05D005475 1.6e-36 157.1 149 58.4
Lalb_Chr13g0296251 Lupinus albus HOM05D002293 ORTHO05D005475 4.9e-33 145.6 132 59.1
vmacro12893 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 4.9e-33 145.6 162 53.7
Mapoly0014s0184 Marchantia polymorpha HOM05D002293 ORTHO05D005475 1.4e-32 144.1 230 38.3
AagrBONN_evm.TU.Sc2ySwM_117.3341 Anthoceros agrestis HOM05D002293 ORTHO05D005475 6.0e-31 138.7 224 36.6
HPP92_010897 Vanilla planifolia HOM05D002293 ORTHO05D005475 1.6e-28 130.6 222 45.5
Pp3c9_7910 Physcomitrium patens HOM05D002293 ORTHO05D005475 2.1e-28 130.2 208 37.0
Nn8g40924 Nelumbo nucifera HOM05D002293 ORTHO05D005475 1.1e-24 117.9 210 42.9
CBR_g39756 Chara braunii HOM05D002293 ORTHO05D005475 9.3e-24 114.8 218 34.9
CBR_g72646 Chara braunii HOM05D002293 ORTHO05D005475 3.5e-23 112.8 218 33.9
vmacro18642 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 1.0e-22 111.3 236 37.7
Peaxi162Scf00226g00011 Petunia axillaris HOM05D002293 ORTHO05D005475 3.0e-22 109.8 100 61.0
unitig_744.g24089 Utricularia gibba HOM05D002293 ORTHO05D005475 6.2e-20 102.1 63 81.0
ATR0736G144 Amborella trichopoda HOM05D006066 ORTHO05D007720 2.1e-15 87.0 81 58.0
SEGI_39212 Sequoiadendron giganteum HOM05D002293 ORTHO05D005475 8.7e-14 81.6 64 70.3
Gohir.D08G112008 Gossypium hirsutum HOM05D001556 ORTHO05D005475 3.7e-12 76.3 67 64.2
Nn2g12848 Nelumbo nucifera HOM05D002293 ORTHO05D005475 3.1e-11 73.2 156 40.4
SMO367G0772 Selaginella moellendorffii HOM05D002293 ORTHO05D005475 4.1e-11 72.8 217 29.0
BcaC08g42952 Brassica carinata HOM05D004411 ORTHO05D032662 7.9e-07 58.5 41 75.6
BcaC09g49352 Brassica carinata HOM05D000853 ORTHO05D000723 1.4e-06 57.8 40 77.5


User provided reference genes

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