Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 4.5e-166 587.8 285 100.0
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 1.1e-74 284.3 220 66.8
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 3.4e-73 279.3 225 64.9
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 3.4e-73 279.3 234 62.8
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 8.4e-72 274.6 187 71.1
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 7.1e-71 271.6 211 63.0
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 1.2e-70 270.8 183 71.0
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 6.0e-70 268.5 188 68.1
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 1.3e-69 267.3 218 61.9
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 1.7e-69 266.9 175 73.7
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 1.7e-69 266.9 223 63.7
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 3.0e-69 266.2 170 73.5
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 3.9e-69 265.8 175 72.6
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 3.9e-69 265.8 194 67.5
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 3.9e-69 265.8 190 67.4
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 5.1e-69 265.4 190 67.9
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 8.7e-69 264.6 187 67.9
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 1.1e-68 264.2 224 61.6
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 2.5e-68 263.1 165 74.5
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 3.3e-68 262.7 220 62.3
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 3.3e-68 262.7 194 66.5
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 5.6e-68 261.9 220 62.3
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 5.6e-68 261.9 201 65.2
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 1.3e-67 260.8 216 63.0
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 1.3e-67 260.8 187 69.5
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 1.6e-67 260.4 174 70.1
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 1.6e-67 260.4 222 61.7
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 2.8e-67 259.6 191 65.4
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 2.8e-67 259.6 188 69.7
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 3.6e-67 259.2 175 68.6
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 4.8e-67 258.8 189 67.7
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 8.1e-67 258.1 171 67.8
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 1.4e-66 257.3 224 62.1
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 3.1e-66 256.1 176 66.5
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 3.1e-66 256.1 190 65.8
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 3.1e-66 256.1 166 71.7
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 4.0e-66 255.8 204 65.7
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 5.3e-66 255.4 186 67.7
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 9.0e-66 254.6 166 72.3
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 9.0e-66 254.6 166 72.3
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 9.0e-66 254.6 172 70.3
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 1.2e-65 254.2 217 60.4
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 1.2e-65 254.2 210 63.3
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 3.4e-65 252.7 190 63.7
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 3.4e-65 252.7 192 66.1
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 3.4e-65 252.7 165 71.5
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 4.5e-65 252.3 206 60.7
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 4.5e-65 252.3 211 63.5
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 5.8e-65 251.9 173 71.1
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 5.8e-65 251.9 173 70.5
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 5.8e-65 251.9 204 61.3
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 9.9e-65 251.1 210 62.9
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 1.3e-64 250.8 165 70.9
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 2.2e-64 250.0 175 69.1
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 2.2e-64 250.0 190 64.7
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 2.9e-64 249.6 175 68.0
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 6.4e-64 248.4 173 70.5
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 8.4e-64 248.1 207 62.3
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 1.1e-63 247.7 166 70.5
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 1.4e-63 247.3 174 67.2
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 1.9e-63 246.9 201 62.2
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 2.4e-63 246.5 188 62.8
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 7.1e-63 245.0 200 62.0
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 2.7e-62 243.0 210 61.9
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 6.0e-62 241.9 209 60.3
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 6.0e-62 241.9 250 52.0
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 1.0e-61 241.1 184 63.6
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 1.3e-61 240.7 192 62.5
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 1.3e-61 240.7 183 67.2
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 3.0e-61 239.6 197 60.4
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 3.9e-61 239.2 191 60.7
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 8.7e-61 238.0 190 61.6
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 1.5e-60 237.3 191 61.8
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 1.9e-60 236.9 186 64.0
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 2.5e-60 236.5 165 66.1
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 3.7e-59 232.6 163 66.3
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 1.1e-58 231.1 246 51.6
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 7.6e-57 224.9 148 70.3
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 2.5e-55 219.9 180 62.2
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 2.7e-54 216.5 146 71.2
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 3.5e-54 216.1 258 50.0
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 4.6e-54 215.7 165 66.1
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 7.9e-54 214.9 140 70.0
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 1.0e-53 214.5 139 69.8
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 3.0e-53 213.0 138 71.7
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 2.5e-52 209.9 274 45.3
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 1.6e-51 207.2 147 67.3
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 6.9e-50 201.8 157 64.3
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 1.5e-49 200.7 172 59.9
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 1.4e-47 194.1 127 71.7
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 1.5e-44 184.1 122 70.5
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 3.3e-44 183.0 122 69.7
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 7.7e-41 171.8 122 64.8
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 2.1e-38 163.7 185 43.8
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 2.7e-38 163.3 214 43.0
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 1.4e-34 151.0 233 38.2
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 2.1e-30 137.1 77 83.1
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 5.3e-26 122.5 74 73.0
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 1.4e-21 107.8 221 31.7
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 2.9e-08 63.5 87 50.6


User provided reference genes

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