Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4641 Utricularia gibba HOM05D006452 ORTHO05D008068 3.0e-90 335.1 165 100.0
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 1.7e-80 302.8 165 92.7
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 1.7e-45 186.4 160 58.8
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 2.0e-41 172.9 160 53.1
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 2.6e-41 172.6 160 55.0
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 2.4e-39 166.0 160 54.4
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 2.1e-35 152.9 159 49.7
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 3.4e-33 145.6 157 48.4
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 5.8e-33 144.8 162 44.4
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 5.8e-33 144.8 155 47.1
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 7.6e-33 144.4 158 46.2
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 2.2e-32 142.9 158 46.2
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 2.9e-32 142.5 163 47.9
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 3.8e-32 142.1 156 46.8
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 4.9e-32 141.7 158 44.9
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 8.4e-32 141.0 158 45.6
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 8.4e-32 141.0 160 46.2
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 1.4e-31 140.2 161 42.9
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 1.9e-31 139.8 158 45.6
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 1.9e-31 139.8 162 46.3
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 1.9e-31 139.8 158 47.5
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 2.4e-31 139.4 156 44.2
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 2.4e-31 139.4 158 44.3
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 3.2e-31 139.0 158 49.4
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 4.2e-31 138.7 159 46.5
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 5.4e-31 138.3 159 43.4
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 1.6e-30 136.7 157 44.6
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 1.6e-30 136.7 158 42.4
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 2.1e-30 136.3 158 44.3
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 2.1e-30 136.3 155 45.8
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 2.7e-30 136.0 156 46.2
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 3.5e-30 135.6 162 46.3
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 3.5e-30 135.6 158 44.3
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 6.0e-30 134.8 157 47.8
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 6.0e-30 134.8 156 44.2
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 7.8e-30 134.4 159 47.2
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 1.0e-29 134.0 161 43.5
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 1.0e-29 134.0 165 47.3
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 1.3e-29 133.7 155 45.8
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 2.3e-29 132.9 158 46.2
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 2.3e-29 132.9 157 45.9
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 3.0e-29 132.5 166 44.6
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 3.9e-29 132.1 161 42.9
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 5.1e-29 131.7 153 45.1
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 8.7e-29 131.0 154 43.5
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 1.1e-28 130.6 157 45.2
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.1e-28 130.6 159 43.4
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 1.1e-28 130.6 156 43.6
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 1.9e-28 129.8 159 44.7
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 2.5e-28 129.4 161 45.3
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 2.5e-28 129.4 158 46.2
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 3.3e-28 129.0 158 45.6
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 5.6e-28 128.3 158 45.6
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 7.3e-28 127.9 176 40.9
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 9.6e-28 127.5 158 45.6
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 9.6e-28 127.5 156 44.9
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 1.3e-27 127.1 157 42.0
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 2.1e-27 126.3 154 44.2
TPR.G10795 Trifolium pratense HOM05D006452 ORTHO05D008068 2.8e-27 125.9 154 42.9
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 3.6e-27 125.6 157 45.2
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 3.6e-27 125.6 161 43.5
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 4.8e-27 125.2 161 43.5
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 4.8e-27 125.2 157 44.6
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 1.1e-26 124.0 160 41.2
Psat1g201600 Pisum sativum HOM05D006452 ORTHO05D008068 1.4e-26 123.6 155 39.4
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 1.8e-26 123.2 161 42.9
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 1.8e-26 123.2 161 42.9
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 1.8e-26 123.2 159 45.9
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 2.4e-26 122.9 168 41.1
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 6.9e-26 121.3 154 41.6
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 6.9e-26 121.3 154 41.6
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 9.0e-26 120.9 155 43.2
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 1.2e-25 120.6 158 41.8
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 1.5e-25 120.2 154 40.9
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 2.0e-25 119.8 155 41.3
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 2.0e-25 119.8 172 38.4
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 2.6e-25 119.4 183 35.5
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 3.4e-25 119.0 202 36.1
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 9.9e-25 117.5 158 43.0
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 1.3e-24 117.1 168 37.5
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 2.9e-24 115.9 154 40.3
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 8.4e-24 114.4 160 41.2
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 1.1e-23 114.0 164 37.2
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 1.1e-23 114.0 135 44.4
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 2.4e-23 112.8 160 40.6
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 3.2e-23 112.5 162 39.5
Lsat_1_v5_gn_9_9480 Lactuca sativa HOM05D006452 ORTHO05D008068 4.2e-23 112.1 157 40.1
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 5.4e-23 111.7 166 37.3
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 1.2e-22 110.5 161 38.5
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 3.9e-21 105.5 232 31.9
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 6.7e-21 104.8 232 32.3
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 4.3e-20 102.1 74 63.5
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 1.2e-17 94.0 122 37.7
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 2.0e-17 93.2 158 38.0
SEGI_16257 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 1.7e-16 90.1 180 34.4
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 3.0e-13 79.3 160 31.2
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 3.1e-10 69.3 65 47.7
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 2.6e-09 66.2 181 29.3
CAN.G638.7 Capsicum annuum HOM05D006452 ORTHO05D008068 1.2e-06 57.4 123 34.1
FvH4_3g08350 Fragaria vesca HOM05D003433 ORTHO05D003921 3.5e-06 55.8 47 55.3


User provided reference genes

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