Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 0.0e+00 1157.1 581 100.0
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 1.3e-175 620.5 597 56.4
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 1.4e-158 563.9 587 51.8
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 1.4e-150 537.3 620 47.9
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 7.8e-149 531.6 572 49.0
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 4.4e-144 515.8 600 48.0
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 7.0e-142 508.4 557 49.0
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 9.2e-142 508.1 599 47.1
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 2.0e-141 506.9 583 48.0
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 2.7e-141 506.5 605 46.6
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 1.7e-140 503.8 590 45.9
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 6.6e-140 501.9 577 47.7
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 9.5e-139 498.0 594 45.8
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 6.2e-138 495.4 593 45.5
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 1.5e-136 490.7 600 45.0
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 1.5e-136 490.7 599 45.7
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 2.6e-136 490.0 592 45.8
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 1.3e-135 487.6 607 45.5
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 4.9e-135 485.7 586 45.6
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 8.3e-135 485.0 586 45.4
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 1.1e-134 484.6 591 45.3
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 9.2e-134 481.5 587 45.7
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 1.6e-133 480.7 586 44.4
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 1.7e-132 477.2 569 45.0
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 3.0e-132 476.5 591 44.0
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 6.6e-132 475.3 597 44.4
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 6.6e-132 475.3 598 44.8
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 1.6e-130 470.7 600 43.5
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 3.6e-130 469.5 573 45.0
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 8.1e-130 468.4 586 45.1
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 1.1e-129 468.0 628 42.7
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 1.1e-129 468.0 573 46.1
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 1.4e-129 467.6 623 42.9
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 5.2e-129 465.7 552 46.6
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 8.9e-129 464.9 560 45.9
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 1.5e-128 464.2 575 44.9
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 1.5e-128 464.2 596 43.5
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 1.5e-128 464.2 612 42.5
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 2.0e-128 463.8 645 42.0
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 2.0e-128 463.8 610 44.1
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 7.5e-128 461.8 624 42.5
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 1.1e-126 458.0 633 42.5
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 1.9e-126 457.2 572 43.5
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 7.1e-126 455.3 622 41.6
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 1.2e-125 454.5 588 43.7
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 1.2e-125 454.5 625 41.9
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 3.5e-125 453.0 603 42.5
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 4.6e-125 452.6 597 42.5
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 1.7e-124 450.7 622 41.5
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.1e-123 448.0 559 45.3
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.9e-123 447.2 542 46.3
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 4.3e-123 446.0 606 43.2
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 6.2e-122 442.2 611 40.4
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 8.1e-122 441.8 600 43.5
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 2.4e-121 440.3 646 40.6
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 1.5e-120 437.6 624 41.2
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 5.8e-120 435.6 651 40.9
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 1.7e-119 434.1 618 40.9
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 4.9e-119 432.6 626 41.2
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 1.4e-118 431.0 583 41.7
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 1.2e-117 427.9 626 40.7
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 2.1e-117 427.2 524 44.7
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 3.9e-116 422.9 591 41.5
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 6.6e-116 422.2 599 40.9
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 6.6e-116 422.2 622 40.5
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 1.1e-115 421.4 623 40.6
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 5.6e-115 419.1 682 37.7
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 7.3e-115 418.7 627 40.4
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 1.6e-114 417.5 626 40.1
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 1.6e-114 417.5 595 40.3
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 3.6e-114 416.4 615 40.7
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 5.3e-113 412.5 555 42.7
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 1.2e-112 411.4 618 39.5
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 3.4e-112 409.8 596 40.4
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 3.4e-112 409.8 682 37.1
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 3.5e-109 399.8 530 44.7
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 6.2e-106 389.0 591 43.1
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 8.1e-106 388.7 380 54.7
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 3.8e-103 379.8 706 35.6
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.1e-102 378.3 390 50.0
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 7.1e-102 375.6 653 37.1
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 5.1e-100 369.4 526 40.7
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 3.1e-97 360.1 450 42.4
CAN.G189.65 Capsicum annuum HOM05D006452 ORTHO05D008068 6.9e-97 359.0 374 49.5
vmacro15945 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 2.0e-96 357.5 370 51.9
PGR004G2109 Punica granatum HOM05D006452 ORTHO05D008068 3.4e-96 356.7 381 48.8
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 3.8e-95 353.2 493 40.4
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 8.4e-95 352.1 573 37.9
TPR.G11703 Trifolium pratense HOM05D006452 ORTHO05D008068 1.1e-94 351.7 358 51.1
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 3.0e-92 343.6 575 37.9
Psat1g201640 Pisum sativum HOM05D006452 ORTHO05D008068 5.6e-91 339.3 375 47.7
Eucgr.D00580 Eucalyptus grandis HOM05D006452 ORTHO05D008068 6.2e-90 335.9 376 49.2
Hund23835 Selenicereus undatus HOM05D006452 ORTHO05D008068 6.2e-90 335.9 413 45.5
Cpa.g.sc7.8 Carica papaya HOM05D006452 ORTHO05D008068 5.8e-88 329.3 388 45.9
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 3.8e-87 326.6 461 39.9
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 6.7e-84 315.8 579 35.9
unitig_8.g4641 Utricularia gibba HOM05D006452 ORTHO05D008068 4.5e-80 303.1 165 92.7
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 7.7e-80 302.4 579 33.7
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 5.5e-78 296.2 420 39.0
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 3.9e-76 290.0 419 38.2
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 3.9e-76 290.0 422 37.9
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 4.8e-74 283.1 648 31.8
CAN.G1286.36 Capsicum annuum HOM05D006452 ORTHO05D008068 2.5e-62 244.2 295 45.4
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 5.0e-55 219.9 575 28.3
CAN.G801.36 Capsicum annuum HOM05D006452 ORTHO05D008068 4.2e-46 190.3 251 42.2
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 7.2e-38 162.9 604 26.8
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 2.6e-35 154.5 158 48.1
TPR.G10795 Trifolium pratense HOM05D006452 ORTHO05D008068 1.6e-32 145.2 152 45.4
Psat1g201600 Pisum sativum HOM05D006452 ORTHO05D008068 7.8e-32 142.9 153 41.8
SEGI_13408 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 9.8e-27 125.9 209 37.8
Lsat_1_v5_gn_9_9480 Lactuca sativa HOM05D006452 ORTHO05D008068 3.2e-25 120.9 147 42.9
Pp3c17_22050 Physcomitrium patens HOM05D006452 ORTHO05D008068 1.5e-22 112.1 325 29.8
CDE10G0511 Ceratophyllum demersum HOM05D002520 ORTHO05D003144 5.8e-19 100.1 147 46.3
SEGI_16257 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 9.8e-19 99.4 191 33.0
Peaxi162Scf01018g00213 Petunia axillaris HOM05D006452 ORTHO05D008068 2.8e-13 81.3 67 58.2
MBI15_g20021_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.4e-12 79.0 62 64.5
BcaC01g06820 Brassica carinata HOM05D006452 ORTHO05D008068 2.2e-10 71.6 102 43.1
CAN.G638.7 Capsicum annuum HOM05D006452 ORTHO05D008068 2.1e-08 65.1 111 36.9
GSVIVG01026713001 Vitis vinifera HOM05D006452 ORTHO05D008068 1.3e-07 62.4 96 38.5
CAN.G404.26 Capsicum annuum HOM05D006452 ORTHO05D008068 5.6e-06 57.0 62 37.1


User provided reference genes

Program Settings