Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 9.3e-212 740.0 375 100.0
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 7.9e-78 295.0 273 57.9
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 2.8e-75 286.6 284 56.7
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 1.1e-71 274.6 317 49.5
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 1.6e-70 270.8 316 49.1
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 1.8e-58 230.7 330 43.3
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 3.1e-58 229.9 353 41.6
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 3.1e-58 229.9 330 43.0
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 5.3e-58 229.2 332 43.7
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 7.7e-57 225.3 333 41.1
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 1.0e-56 224.9 292 46.6
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 2.2e-56 223.8 320 44.4
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 3.8e-56 223.0 322 45.7
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 3.0e-53 213.4 319 42.6
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 3.9e-53 213.0 332 41.0
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 1.3e-51 208.0 286 44.1
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 3.7e-51 206.5 275 46.9
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 8.2e-51 205.3 333 39.9
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 1.2e-49 201.4 320 43.4
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 2.0e-49 200.7 275 44.7
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 2.0e-49 200.7 274 45.6
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 5.9e-49 199.1 321 40.5
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 5.0e-48 196.1 275 43.6
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 8.5e-48 195.3 239 46.4
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 1.1e-47 194.9 320 40.3
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 3.2e-47 193.4 320 40.3
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 3.2e-47 193.4 287 43.2
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 7.2e-47 192.2 276 43.5
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 1.2e-46 191.4 277 44.8
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 1.6e-46 191.0 304 41.1
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 2.7e-46 190.3 288 43.4
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 1.0e-45 188.3 289 41.2
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 2.3e-45 187.2 300 42.0
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 3.0e-45 186.8 288 42.4
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 4.0e-45 186.4 277 44.0
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 5.2e-45 186.0 277 44.0
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 1.5e-44 184.5 362 35.6
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 2.0e-44 184.1 276 43.5
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 3.3e-44 183.3 277 43.0
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 1.3e-43 181.4 275 41.5
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 1.7e-43 181.0 368 35.6
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 6.3e-43 179.1 324 37.0
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 6.3e-43 179.1 280 42.9
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 1.1e-42 178.3 301 41.2
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 1.1e-42 178.3 276 43.5
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 1.8e-42 177.6 296 42.6
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 1.8e-42 177.6 296 40.2
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 4.1e-42 176.4 281 41.3
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 4.1e-42 176.4 300 41.0
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 5.3e-42 176.0 295 42.7
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 7.0e-42 175.6 274 42.0
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 9.1e-42 175.3 288 40.6
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 1.2e-41 174.9 320 39.4
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 1.2e-41 174.9 276 40.6
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 2.0e-41 174.1 275 42.2
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 4.5e-41 172.9 277 41.9
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 5.9e-41 172.6 320 38.4
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 2.2e-40 170.6 277 41.5
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 2.9e-40 170.2 266 41.7
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 3.8e-40 169.9 307 39.1
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 3.8e-40 169.9 275 41.1
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 5.0e-40 169.5 276 41.3
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 6.5e-40 169.1 277 40.4
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 6.5e-40 169.1 273 40.3
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 6.5e-40 169.1 273 40.3
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 6.5e-40 169.1 249 41.8
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 1.1e-39 168.3 275 40.7
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 1.1e-39 168.3 286 37.8
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 1.9e-39 167.5 277 42.6
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 5.5e-39 166.0 273 40.3
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 5.5e-39 166.0 273 40.3
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 5.5e-39 166.0 273 40.3
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 5.5e-39 166.0 229 45.0
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 1.2e-38 164.9 274 40.5
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 1.6e-38 164.5 275 40.0
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 8.0e-38 162.2 303 37.3
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 1.0e-37 161.8 329 38.6
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 3.0e-37 160.2 275 40.4
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 4.0e-37 159.8 266 41.4
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 6.8e-37 159.1 274 39.1
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 1.2e-36 158.3 273 39.6
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 2.0e-36 157.5 273 38.5
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 1.7e-35 154.5 276 39.5
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 2.2e-35 154.1 280 40.4
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 3.8e-32 143.3 320 35.3
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 4.7e-30 136.3 275 37.5
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 4.7e-30 136.3 246 38.6
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 3.1e-26 123.6 195 39.5
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 7.2e-23 112.5 171 42.7
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 9.5e-23 112.1 275 32.4
Cc00_g31740 Coffea canephora HOM05D006061 ORTHO05D007450 6.4e-19 99.4 153 39.2
Phvul.004G074200 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 1.4e-18 98.2 181 38.7
Rhsim13G0055400 Rhododendron simsii HOM05D006061 ORTHO05D007450 1.2e-14 85.1 182 31.9
Zm00001eb008990 Zea mays HOM05D006061 ORTHO05D007450 4.0e-13 80.1 161 32.3
Zm00001eb428270 Zea mays HOM05D006061 ORTHO05D007450 3.7e-11 73.6 154 33.8
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 3.0e-08 63.9 282 27.3
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 3.9e-08 63.5 227 27.8
Zm00001eb120120 Zea mays HOM05D006061 ORTHO05D007450 3.9e-08 63.5 136 33.1
SHI26842 Sapria himalayana HOM05D006061 ORTHO05D007450 3.3e-07 60.5 157 30.6
Zm00001eb399320 Zea mays HOM05D000103 ORTHO05D007450 9.5e-07 58.9 182 28.6


User provided reference genes

Program Settings