Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 0.0e+00 1202.6 652 100.0
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 4.1e-239 831.6 673 68.8
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 1.5e-228 796.6 672 67.3
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 5.2e-226 788.1 672 66.8
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 8.8e-218 760.8 673 64.0
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 2.6e-217 759.2 672 62.9
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 1.3e-213 746.9 673 62.9
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 2.5e-212 742.7 673 62.1
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 2.5e-212 742.7 673 62.7
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 9.4e-212 740.7 673 62.4
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 1.5e-209 733.4 673 62.0
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 2.2e-208 729.6 678 61.8
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 2.8e-208 729.2 673 62.0
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 5.4e-207 724.9 702 60.1
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 6.6e-205 718.0 674 60.5
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 2.5e-204 716.1 673 60.3
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 4.2e-204 715.3 673 61.1
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 9.5e-204 714.1 696 59.8
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 1.2e-203 713.8 673 60.8
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 3.6e-203 712.2 673 60.0
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 5.2e-202 708.4 673 60.5
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 6.8e-202 708.0 673 61.4
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 8.9e-202 707.6 672 60.0
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 3.4e-201 705.7 759 55.2
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 1.3e-200 703.7 674 61.3
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 6.4e-200 701.4 672 59.7
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 8.3e-200 701.0 673 60.0
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 1.4e-199 700.3 672 59.2
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 1.8e-199 699.9 670 58.5
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 3.2e-199 699.1 671 59.2
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 2.0e-198 696.4 669 58.7
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 3.5e-198 695.7 673 59.9
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 4.6e-198 695.3 672 58.9
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 1.7e-197 693.3 673 59.4
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 2.3e-197 693.0 669 58.6
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 2.9e-197 692.6 673 58.5
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 5.0e-197 691.8 643 60.3
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 6.6e-197 691.4 682 58.9
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 1.6e-195 686.8 679 59.4
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 2.1e-195 686.4 672 57.4
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 2.3e-194 682.9 672 59.5
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 3.1e-194 682.6 670 57.0
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 4.0e-194 682.2 670 56.9
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 6.8e-194 681.4 672 58.8
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 7.5e-193 677.9 673 58.5
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 9.8e-193 677.6 669 58.3
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 3.7e-192 675.6 670 56.9
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 1.4e-191 673.7 676 57.1
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 3.2e-191 672.5 671 57.4
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 4.1e-191 672.2 672 57.4
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 5.4e-191 671.8 670 56.6
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 5.4e-191 671.8 670 56.9
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 7.8e-190 667.9 655 59.5
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 3.0e-189 666.0 675 57.8
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 3.0e-189 666.0 668 57.2
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 3.9e-189 665.6 661 57.9
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 5.0e-189 665.2 670 56.1
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 6.6e-189 664.8 668 57.2
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 6.6e-189 664.8 673 57.1
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 4.3e-188 662.1 670 56.0
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 3.6e-187 659.1 669 57.4
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 2.3e-186 656.4 672 56.4
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 8.9e-186 654.4 674 56.8
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 1.2e-185 654.1 675 56.3
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 7.5e-185 651.4 669 55.9
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 2.9e-184 649.4 670 55.8
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 2.7e-182 642.9 669 54.9
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 4.6e-182 642.1 763 51.6
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 1.3e-181 640.6 672 55.7
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 1.3e-181 640.6 672 55.7
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 1.2e-179 634.0 631 56.7
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 5.2e-178 628.6 675 55.0
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 3.9e-173 612.5 743 52.1
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 5.1e-173 612.1 667 55.3
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 3.3e-172 609.4 660 53.6
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 5.6e-172 608.6 644 55.4
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 1.4e-170 604.0 673 54.4
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 3.1e-170 602.8 641 55.4
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 1.2e-169 600.9 671 52.5
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 3.8e-168 595.9 655 55.1
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 7.8e-166 588.2 671 53.8
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 2.3e-165 586.6 647 54.4
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 4.3e-164 582.4 687 51.4
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.6e-163 580.5 594 58.1
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 3.3e-156 556.2 673 51.9
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 7.4e-156 555.1 671 49.2
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 2.4e-154 550.1 666 48.8
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 3.2e-151 539.7 726 47.0
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 5.5e-151 538.9 675 48.9
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 1.1e-138 498.0 675 46.2
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 1.2e-137 494.6 534 54.9
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 1.5e-132 477.6 579 49.7
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 1.4e-114 417.9 363 63.4
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 1.2e-113 414.8 358 63.4
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.2e-105 388.3 501 49.3
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 1.5e-103 381.3 373 60.6
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 8.0e-102 375.6 517 48.7
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 1.5e-100 371.3 262 75.6
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 1.1e-98 365.2 302 65.6
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 1.4e-93 348.2 374 55.9
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 1.2e-86 325.1 698 33.4
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 8.0e-86 322.4 322 58.1
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 9.8e-76 288.9 665 31.0
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 1.5e-71 275.0 658 32.2
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.1e-69 268.9 329 51.1
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 4.0e-69 266.9 271 58.7
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 1.1e-66 258.8 378 45.8
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 3.5e-65 253.8 310 50.6
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 5.8e-60 236.5 696 28.9
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 2.9e-59 234.2 705 29.1
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 3.0e-56 224.2 444 39.2
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 3.0e-56 224.2 431 38.3
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 3.5e-25 120.9 510 26.3
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 1.5e-23 115.5 131 51.1
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.9e-23 115.2 84 65.5
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 5.3e-21 107.1 111 55.0
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 6.1e-17 93.6 212 37.7
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.3e-16 91.7 103 49.5
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 3.3e-15 87.8 137 40.9
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 6.3e-14 83.6 118 39.0
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.3e-13 80.5 54 77.8
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 4.5e-12 77.4 235 29.8
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 3.8e-11 74.3 139 34.5
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 1.4e-10 72.4 74 52.7
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 9.4e-10 69.7 94 46.8
QL08p014094 Quercus lobata HOM05D006009 ORTHO05D007389 6.1e-09 67.0 44 72.7
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 1.0e-08 66.2 42 78.6
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 1.4e-08 65.9 55 60.0
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 1.7e-06 58.9 81 39.5


User provided reference genes

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