Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4506 Utricularia gibba HOM05D007068 ORTHO05D008590 3.2e-220 768.1 383 100.0
SalBow1G5613 Salvia bowleyana HOM05D007068 ORTHO05D008590 1.7e-48 197.6 429 36.6
Migut.D01541 Erythranthe guttata HOM05D007068 ORTHO05D008590 8.7e-48 195.3 453 35.5
SGA_v2.0_scaffold36G14383 Striga asiatica HOM05D007068 ORTHO05D008590 1.9e-42 177.6 424 35.4
Oeu031766.1 Olea europaea HOM05D007068 ORTHO05D008590 6.9e-37 159.1 439 33.0
Peaxi162Scf00683g00454 Petunia axillaris HOM05D007068 ORTHO05D008590 2.5e-31 140.6 412 30.8
Cc04_g06260 Coffea canephora HOM05D007068 ORTHO05D008590 9.6e-31 138.7 464 29.7
Peaxi162Scf00683g00453 Petunia axillaris HOM05D007068 ORTHO05D008590 9.6e-31 138.7 441 29.3
PGSC0003DMG400005672 Solanum tuberosum HOM05D007068 ORTHO05D008590 1.3e-30 138.3 439 30.5
Nitab4.5_0003401g0040 Nicotiana tabacum HOM05D007068 ORTHO05D008590 2.8e-30 137.1 430 31.2
Solyc03g118700.3 Solanum lycopersicum HOM05D007068 ORTHO05D008590 3.1e-29 133.7 444 30.4
Actinidia39838 Actinidia chinensis HOM05D007068 ORTHO05D008590 1.5e-28 131.3 450 29.6
CAN.G843.56 Capsicum annuum HOM05D007068 ORTHO05D008590 1.0e-27 128.6 445 28.8
Nitab4.5_0004556g0050 Nicotiana tabacum HOM05D007068 ORTHO05D008590 1.3e-27 128.3 456 30.0
Cfa019656 Carpinus fangiana HOM05D007068 ORTHO05D008590 4.2e-26 123.2 428 29.9
Dinv17551 Davidia involucrata HOM05D007068 ORTHO05D008590 1.6e-25 121.3 426 28.9
COL.COLO4_04377 Corchorus olitorius HOM05D007068 ORTHO05D008590 7.4e-23 112.5 439 28.7
CANSAT80G0386 Cannabis sativa HOM05D007068 ORTHO05D008590 1.3e-22 111.7 427 28.1
Hma1.2p1_0669F.1_g200120 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 1.3e-22 111.7 491 28.5
GSVIVG01011540001 Vitis vinifera HOM05D007068 ORTHO05D008590 1.6e-22 111.3 422 26.8
Rhsim08G0124500 Rhododendron simsii HOM05D007068 ORTHO05D008590 2.4e-21 107.5 222 35.6
TAR622G0435 Trochodendron aralioides HOM05D007068 ORTHO05D008590 5.3e-21 106.3 483 28.0
CSS0009831 Camellia sinensis var. sinensis HOM05D007068 ORTHO05D008590 6.9e-21 105.9 444 26.4
Sp1g35530 Schrenkiella parvula HOM05D007068 ORTHO05D008590 3.4e-20 103.6 444 27.5
ClCG06G014310 Citrullus lanatus HOM05D007068 ORTHO05D008590 1.0e-19 102.1 461 27.5
Hma1.2p1_0669F.1_g200130 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 2.2e-19 100.9 452 29.2
PSO478G2297 Papaver somniferum HOM05D007068 ORTHO05D008590 2.2e-19 100.9 458 25.5
Aqoxy3G00060 Aquilegia oxysepala HOM05D007068 ORTHO05D008590 2.9e-19 100.5 454 28.9
CiPaw.16G093400 Carya illinoinensis HOM05D007068 ORTHO05D008590 6.5e-19 99.4 455 25.9
Nn3g18277 Nelumbo nucifera HOM05D007068 ORTHO05D008590 6.5e-19 99.4 395 28.4
AT1G48580 Arabidopsis thaliana HOM05D007068 ORTHO05D008590 8.5e-19 99.0 466 26.0
Duzib084G0836 Durio zibethinus HOM05D007068 ORTHO05D008590 1.4e-18 98.2 229 35.8
Lsat_1_v5_gn_2_14700 Lactuca sativa HOM05D007068 ORTHO05D008590 1.4e-18 98.2 232 34.5
Carub.0001s3769 Capsella rubella HOM05D007068 ORTHO05D008590 1.9e-18 97.8 453 27.2
AL1G55220 Arabidopsis lyrata HOM05D007068 ORTHO05D008590 2.5e-18 97.4 442 26.0
CARHR038180 Cardamine hirsuta HOM05D007068 ORTHO05D008590 5.5e-18 96.3 453 24.5
PSO017G3869 Papaver somniferum HOM05D007068 ORTHO05D008590 9.4e-18 95.5 459 25.7
Sopen03g037660 Solanum pennellii HOM05D007068 ORTHO05D008590 9.4e-18 95.5 167 38.3
A06p04350 Brassica napus HOM05D007068 ORTHO05D008590 1.2e-17 95.1 441 27.2
Sed0003101 Sechium edule HOM05D007068 ORTHO05D008590 1.2e-17 95.1 430 27.9
Thecc.03G056900 Theobroma cacao HOM05D007068 ORTHO05D008590 1.6e-17 94.7 328 30.2
Potri.012G047000 Populus trichocarpa HOM05D007068 ORTHO05D008590 3.6e-17 93.6 453 26.5
EL10Ac4g08480 Beta vulgaris HOM05D007068 ORTHO05D008590 6.1e-17 92.8 323 29.1
Gohir.A07G061700 Gossypium hirsutum HOM05D007068 ORTHO05D008590 7.9e-17 92.4 231 35.1
Thhalv10011472m.g Eutrema salsugineum HOM05D007068 ORTHO05D008590 2.3e-16 90.9 463 26.6
Prupe.5G233500 Prunus persica HOM05D007068 ORTHO05D008590 3.0e-16 90.5 223 32.3
Haze_18849 Corylus avellana HOM05D007068 ORTHO05D008590 5.1e-16 89.7 239 33.1
Manes.14G171300 Manihot esculenta HOM05D007068 ORTHO05D008590 6.7e-16 89.4 424 27.6
Gohir.D07G066400 Gossypium hirsutum HOM05D007068 ORTHO05D008590 1.1e-15 88.6 231 35.9
Psat7g003560 Pisum sativum HOM05D007068 ORTHO05D008590 1.5e-15 88.2 418 25.6
Gorai.001G070000 Gossypium raimondii HOM05D007068 ORTHO05D008590 2.0e-15 87.8 233 35.6
Lj4g0019727 Lotus japonicus HOM05D007068 ORTHO05D008590 2.0e-15 87.8 421 24.9
Sabra12G0033000 Salix brachista HOM05D007068 ORTHO05D008590 2.6e-15 87.4 486 25.7
Ca_17189_v3 Cicer arietinum L. HOM05D007068 ORTHO05D008590 3.3e-15 87.0 441 25.4
arahy.Tifrunner.gnm1.ann1.N01HH5 Arachis hypogaea HOM05D007068 ORTHO05D008590 5.7e-15 86.3 222 31.1
C06p03180 Brassica napus HOM05D007068 ORTHO05D008590 9.7e-15 85.5 452 27.9
Eucgr.K02273 Eucalyptus grandis HOM05D007068 ORTHO05D008590 1.3e-14 85.1 253 30.8
Aa31LG10G5220 Aethionema arabicum HOM05D007068 ORTHO05D008590 1.7e-14 84.7 239 33.9
BcaC08g43059 Brassica carinata HOM05D007068 ORTHO05D008590 1.7e-14 84.7 226 33.2
BolC6t35436H Brassica oleracea HOM05D007068 ORTHO05D008590 1.7e-14 84.7 226 33.2
MELO3C017359.2 Cucumis melo HOM05D007068 ORTHO05D008590 2.2e-14 84.3 374 26.2
DCAR_014504 Daucus carota HOM05D007068 ORTHO05D008590 2.2e-14 84.3 450 24.0
Sc10g0009180 Simmondsia chinensis HOM05D007068 ORTHO05D008590 3.7e-14 83.6 204 34.3
ECA238G2622 Erigeron canadensis HOM05D007068 ORTHO05D008590 4.8e-14 83.2 228 30.3
arahy.Tifrunner.gnm1.ann1.ZH8P6D Arachis hypogaea HOM05D007068 ORTHO05D008590 8.2e-14 82.4 222 31.1
CsaV3_1G004370 Cucumis sativus L. HOM05D007068 ORTHO05D008590 8.2e-14 82.4 256 31.6
CDE02G3810 Ceratophyllum demersum HOM05D007068 ORTHO05D008590 4.1e-13 80.1 264 28.0
BcaB07g33743 Brassica carinata HOM05D007068 ORTHO05D008590 5.3e-13 79.7 462 25.5
BraA06t23639Z Brassica rapa HOM05D007068 ORTHO05D008590 9.1e-13 79.0 468 26.7
Lalb_Chr16g0386991 Lupinus albus HOM05D007068 ORTHO05D008590 1.7e-11 74.7 229 28.8
MD06G1227000 Malus domestica HOM05D007068 ORTHO05D008590 1.9e-10 71.2 235 29.4
FAN13G0457 Fragaria x ananassa HOM05D007068 ORTHO05D008590 4.2e-10 70.1 428 25.2
Medtr8g107330 Medicago truncatula HOM05D007068 ORTHO05D008590 7.2e-10 69.3 435 23.9
RcHm_v2.0_Chr7g0178441 Rosa chinensis HOM05D007068 ORTHO05D008590 7.2e-10 69.3 219 30.6
VMungo0251G0101 Vigna mungo HOM05D007068 ORTHO05D008590 1.2e-09 68.6 445 24.7
VMungo0251G0567 Vigna mungo HOM05D007068 ORTHO05D008590 1.2e-09 68.6 177 32.8
Hund10357 Selenicereus undatus HOM05D007068 ORTHO05D008590 1.6e-09 68.2 228 29.4
FvH4_5g17330 Fragaria vesca HOM05D007068 ORTHO05D008590 6.1e-09 66.2 436 24.1
FAN18G2889 Fragaria x ananassa HOM05D007068 ORTHO05D008590 6.1e-09 66.2 436 24.1
Phvul.002G330100 Phaseolus vulgaris HOM05D007068 ORTHO05D008590 6.1e-09 66.2 204 30.4
AUR62037972 Chenopodium quinoa HOM05D007068 ORTHO05D008590 7.9e-09 65.9 139 32.4
Cpa.g.sc3.397 Carica papaya HOM05D007068 ORTHO05D008590 1.8e-08 64.7 201 31.3
HPP92_002012 Vanilla planifolia HOM05D007068 ORTHO05D008590 8.8e-08 62.4 458 24.2
QL10p029594 Quercus lobata HOM05D007068 ORTHO05D008590 1.5e-07 61.6 162 28.4
TPR.G1401 Trifolium pratense HOM05D007068 ORTHO05D008590 2.0e-07 61.2 269 24.2
FAN04G2769 Fragaria x ananassa HOM05D007068 ORTHO05D008590 4.4e-07 60.1 260 27.3
MBI13_g47078_MAGBIO Magnolia biondii HOM05D007068 ORTHO05D008590 7.4e-07 59.3 245 27.3
Glyma.08G054400 Glycine max HOM05D007068 ORTHO05D008590 1.3e-06 58.5 444 23.9


User provided reference genes

Program Settings