Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4463 Utricularia gibba HOM05D006233 ORTHO05D007247 1.6e-91 339.3 164 100.0
SGA_v2.0_scaffold4G02044 Striga asiatica HOM05D006233 ORTHO05D007247 6.4e-24 114.8 127 50.4
MSTRG.9502 Avicennia marina HOM05D006233 ORTHO05D007247 1.1e-23 114.0 130 47.7
Cc04_g01780 Coffea canephora HOM05D006233 ORTHO05D007247 7.1e-23 111.3 126 48.4
Migut.D00962 Erythranthe guttata HOM05D006233 ORTHO05D007247 9.2e-23 110.9 133 49.6
MD17G1173900 Malus domestica HOM05D006233 ORTHO05D007247 2.7e-22 109.4 129 51.2
MD09G1191200 Malus domestica HOM05D006233 ORTHO05D007247 7.8e-22 107.8 129 48.8
Prupe.3G047000 Prunus persica HOM05D006233 ORTHO05D007247 1.7e-21 106.7 130 50.0
SGA_v2.0_scaffold68G22913 Striga asiatica HOM05D006233 ORTHO05D007247 1.7e-21 106.7 129 46.5
Solyc06g062760.3 Solanum lycopersicum HOM05D006233 ORTHO05D007247 2.3e-21 106.3 122 46.7
Actinidia39105 Actinidia chinensis HOM05D006233 ORTHO05D007247 1.1e-20 104.0 127 52.0
Dinv04018 Davidia involucrata HOM05D006233 ORTHO05D007247 1.1e-20 104.0 122 50.0
Nitab4.5_0000255g0250 Nicotiana tabacum HOM05D006233 ORTHO05D007247 1.1e-20 104.0 120 50.0
Actinidia26050 Actinidia chinensis HOM05D006233 ORTHO05D007247 1.9e-20 103.2 124 50.0
Nitab4.5_0005918g0010 Nicotiana tabacum HOM05D006233 ORTHO05D007247 1.9e-20 103.2 120 50.0
Peaxi162Scf00207g01343 Petunia axillaris HOM05D006233 ORTHO05D007247 1.9e-20 103.2 122 46.7
Ca_23330_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 3.3e-20 102.4 118 52.5
Dinv37902 Davidia involucrata HOM05D006233 ORTHO05D007247 3.3e-20 102.4 119 48.7
RcHm_v2.0_Chr2g0143671 Rosa chinensis HOM05D006233 ORTHO05D007247 4.3e-20 102.1 129 45.0
Sopen06g022210 Solanum pennellii HOM05D006233 ORTHO05D007247 4.3e-20 102.1 122 46.7
Lj5A43T71 Lonicera japonica HOM05D006233 ORTHO05D007247 1.2e-19 100.5 135 46.7
PGSC0003DMG400004851 Solanum tuberosum HOM05D006233 ORTHO05D007247 1.2e-19 100.5 124 46.0
TWI63G1789 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 2.8e-19 99.4 120 50.8
Cfa003566 Carpinus fangiana HOM05D006233 ORTHO05D007247 3.6e-19 99.0 130 43.8
CiPaw.01G223500 Carya illinoinensis HOM05D006233 ORTHO05D007247 3.6e-19 99.0 124 48.4
CiPaw.02G138900 Carya illinoinensis HOM05D006233 ORTHO05D007247 6.2e-19 98.2 126 46.0
FAN09G3309 Fragaria x ananassa HOM05D006233 ORTHO05D007247 6.2e-19 98.2 129 44.2
FvH4_6g33800 Fragaria vesca HOM05D006233 ORTHO05D007247 8.1e-19 97.8 129 43.4
FAN14G4045 Fragaria x ananassa HOM05D006233 ORTHO05D007247 8.1e-19 97.8 129 43.4
Lj5A42T58 Lonicera japonica HOM05D006233 ORTHO05D007247 1.4e-18 97.1 72 65.3
CANSAT56G1839 Cannabis sativa HOM05D006233 ORTHO05D007247 1.8e-18 96.7 125 46.4
MELO3C013069.2 Cucumis melo HOM05D006233 ORTHO05D007247 1.8e-18 96.7 77 62.3
TPR.G3185 Trifolium pratense HOM05D006233 ORTHO05D007247 1.8e-18 96.7 92 52.2
TWI38G0279 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 2.4e-18 96.3 119 48.7
Atru.chr1.3781 Acer truncatum HOM05D006233 ORTHO05D007247 4.0e-18 95.5 112 48.2
CsaV3_3G043640 Cucumis sativus L. HOM05D006233 ORTHO05D007247 4.0e-18 95.5 77 62.3
FAN05G2224 Fragaria x ananassa HOM05D006233 ORTHO05D007247 4.0e-18 95.5 129 43.4
Medtr8g017420 Medicago truncatula HOM05D006233 ORTHO05D007247 4.0e-18 95.5 118 48.3
HanXRQChr10g0312401 Helianthus annuus HOM05D006233 ORTHO05D007247 5.2e-18 95.1 126 45.2
Gorai.010G232600 Gossypium raimondii HOM05D006233 ORTHO05D007247 6.8e-18 94.7 120 49.2
arahy.Tifrunner.gnm1.ann1.LDN3BT Arachis hypogaea HOM05D006233 ORTHO05D007247 8.9e-18 94.4 118 49.2
arahy.Tifrunner.gnm1.ann1.9P6A99 Arachis hypogaea HOM05D006233 ORTHO05D007247 1.2e-17 94.0 118 48.3
BraA03t12999Z Brassica rapa HOM05D006233 ORTHO05D007247 1.2e-17 94.0 130 46.2
Sed0001061 Sechium edule HOM05D006233 ORTHO05D007247 1.2e-17 94.0 131 44.3
FAN21G3416 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.5e-17 93.6 60 63.3
Psat4g187760 Pisum sativum HOM05D006233 ORTHO05D007247 1.5e-17 93.6 116 50.0
A03p38490 Brassica napus HOM05D006233 ORTHO05D007247 2.0e-17 93.2 124 48.4
BraA03t13001Z Brassica rapa HOM05D006233 ORTHO05D007247 2.0e-17 93.2 124 48.4
Gohir.D06G199600 Gossypium hirsutum HOM05D006233 ORTHO05D007247 2.0e-17 93.2 77 61.0
AL3G26050 Arabidopsis lyrata HOM05D006233 ORTHO05D007247 2.6e-17 92.8 123 44.7
BcaC05g29149 Brassica carinata HOM05D006233 ORTHO05D007247 2.6e-17 92.8 124 47.6
C05p53920 Brassica napus HOM05D006233 ORTHO05D007247 2.6e-17 92.8 124 47.6
ClCG07G013950 Citrullus lanatus HOM05D006233 ORTHO05D007247 2.6e-17 92.8 60 70.0
Aa31LG8G1060 Aethionema arabicum HOM05D006233 ORTHO05D007247 3.4e-17 92.4 125 47.2
Rhsim08G0234900 Rhododendron simsii HOM05D006233 ORTHO05D007247 3.4e-17 92.4 169 38.5
AT3G13882 Arabidopsis thaliana HOM05D006233 ORTHO05D007247 4.4e-17 92.0 123 44.7
BcaC01g03969 Brassica carinata HOM05D006233 ORTHO05D007247 4.4e-17 92.0 125 47.2
BolC3t16928H Brassica oleracea HOM05D006233 ORTHO05D007247 4.4e-17 92.0 125 47.2
Cpa.g.sc25.68 Carica papaya HOM05D006233 ORTHO05D007247 5.8e-17 91.7 120 47.5
CDE03G0127 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 5.8e-17 91.7 60 70.0
Gohir.A06G191200 Gossypium hirsutum HOM05D006233 ORTHO05D007247 9.9e-17 90.9 77 61.0
Duzib192G0098 Durio zibethinus HOM05D006233 ORTHO05D007247 1.3e-16 90.5 120 47.5
BcaB04g18809 Brassica carinata HOM05D006233 ORTHO05D007247 1.7e-16 90.1 124 46.0
BcaB06g25428 Brassica carinata HOM05D006233 ORTHO05D007247 1.7e-16 90.1 125 46.4
C03p46650 Brassica napus HOM05D006233 ORTHO05D007247 1.7e-16 90.1 125 46.4
Aqoxy7G01184 Aquilegia oxysepala HOM05D006233 ORTHO05D007247 2.9e-16 89.4 120 42.5
Carub.0003s1344 Capsella rubella HOM05D006233 ORTHO05D007247 2.9e-16 89.4 123 43.9
Thhalv10021711m.g Eutrema salsugineum HOM05D006233 ORTHO05D007247 2.9e-16 89.4 124 45.2
Lj5g0016703 Lotus japonicus HOM05D006233 ORTHO05D007247 2.9e-16 89.4 125 46.4
Eucgr.F03142 Eucalyptus grandis HOM05D006233 ORTHO05D007247 3.8e-16 89.0 124 45.2
Hma1.2p1_1128F.1_g259780 Hydrangea macrophylla HOM05D006233 ORTHO05D007247 3.8e-16 89.0 124 43.5
Glyma.08G191600 Glycine max HOM05D006233 ORTHO05D007247 4.9e-16 88.6 52 76.9
PSO210G1065 Papaver somniferum HOM05D006233 ORTHO05D007247 4.9e-16 88.6 131 39.7
GSVIVG01016799001 Vitis vinifera HOM05D006233 ORTHO05D007247 4.9e-16 88.6 127 44.1
PGR119G1625 Punica granatum HOM05D006233 ORTHO05D007247 6.4e-16 88.2 123 43.1
Thecc.06G113700 Theobroma cacao HOM05D006233 ORTHO05D007247 6.4e-16 88.2 121 46.3
Ciclev10026736m.g Citrus clementina HOM05D006233 ORTHO05D007247 8.4e-16 87.8 114 45.6
Potri.003G041100 Populus trichocarpa HOM05D006233 ORTHO05D007247 8.4e-16 87.8 122 44.3
Sp3g12110 Schrenkiella parvula HOM05D006233 ORTHO05D007247 8.4e-16 87.8 125 46.4
Glyma.07G008600 Glycine max HOM05D006233 ORTHO05D007247 1.1e-15 87.4 53 73.6
Manes.04G140700 Manihot esculenta HOM05D006233 ORTHO05D007247 1.1e-15 87.4 124 43.5
Haze_15979 Corylus avellana HOM05D006233 ORTHO05D007247 1.4e-15 87.0 152 38.2
Lalb_Chr25g0280771 Lupinus albus HOM05D006233 ORTHO05D007247 1.4e-15 87.0 60 63.3
Nn6g35511 Nelumbo nucifera HOM05D006233 ORTHO05D007247 1.4e-15 87.0 130 45.4
Phvul.010G137600 Phaseolus vulgaris HOM05D006233 ORTHO05D007247 1.4e-15 87.0 53 71.7
CARHR088680 Cardamine hirsuta HOM05D006233 ORTHO05D007247 1.9e-15 86.7 124 46.0
VMungo0331G0931 Vigna mungo HOM05D006233 ORTHO05D007247 1.9e-15 86.7 116 44.8
Manes.11G024800 Manihot esculenta HOM05D006233 ORTHO05D007247 3.2e-15 85.9 129 45.0
PSO210G5036 Papaver somniferum HOM05D006233 ORTHO05D007247 3.2e-15 85.9 130 39.2
A03p38520 Brassica napus HOM05D006233 ORTHO05D007247 4.2e-15 85.5 119 47.1
AUR62009846 Chenopodium quinoa HOM05D006233 ORTHO05D007247 4.2e-15 85.5 130 40.8
AUR62038159 Chenopodium quinoa HOM05D006233 ORTHO05D007247 1.6e-14 83.6 133 40.6
ECA234G2580 Erigeron canadensis HOM05D006233 ORTHO05D007247 1.6e-14 83.6 124 42.7
Nn8g38812 Nelumbo nucifera HOM05D006233 ORTHO05D007247 1.6e-14 83.6 128 43.8
COL.COLO4_38606 Corchorus olitorius HOM05D006233 ORTHO05D007247 2.7e-14 82.8 122 44.3
MBI04_g36913_MAGBIO Magnolia biondii HOM05D006233 ORTHO05D007247 3.5e-14 82.4 126 40.5
Lsat_1_v5_gn_5_135041 Lactuca sativa HOM05D006233 ORTHO05D007247 4.6e-14 82.0 124 41.9
Hund20828 Selenicereus undatus HOM05D006233 ORTHO05D007247 7.8e-14 81.3 144 41.7
THA.LOC104822640 Tarenaya hassleriana HOM05D006233 ORTHO05D007247 1.5e-12 77.0 58 63.8
EL10Ac7g16362 Beta vulgaris HOM05D006233 ORTHO05D007247 2.5e-12 76.3 136 38.2
Actinidia32155 Actinidia chinensis HOM05D006233 ORTHO05D007247 4.3e-12 75.5 121 38.8
CDE06G1672 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 5.6e-12 75.1 53 71.7
HPP92_007656 Vanilla planifolia HOM05D006233 ORTHO05D007247 2.8e-11 72.8 122 41.8
BolC5t34058H Brassica oleracea HOM05D006233 ORTHO05D007247 3.6e-11 72.4 89 47.2
FAN11G2894 Fragaria x ananassa HOM05D000283 ORTHO05D007247 3.6e-11 72.4 121 37.2
HanXRQChr04g0094941 Helianthus annuus HOM05D006233 ORTHO05D007247 1.8e-10 70.1 116 41.4
Os01g0571200 Oryza sativa ssp. japonica HOM05D006233 ORTHO05D007247 6.9e-10 68.2 132 34.1
Zm00001eb160070 Zea mays HOM05D006233 ORTHO05D007247 5.8e-09 65.1 110 39.1
Zm00001eb357240 Zea mays HOM05D006233 ORTHO05D007247 2.2e-08 63.2 120 36.7
ATR0789G010 Amborella trichopoda HOM05D006233 ORTHO05D007247 3.8e-08 62.4 77 44.2
CSS0050070 Camellia sinensis var. sinensis HOM05D041584 ORTHO05D007247 6.0e-06 55.1 33 72.7


User provided reference genes

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