Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4441 Utricularia gibba HOM05D004551 ORTHO05D005262 2.8e-54 214.9 101 100.0
unitig_578.g15888 Utricularia gibba HOM05D004551 ORTHO05D005262 3.4e-36 154.8 102 76.5
Migut.L01982 Erythranthe guttata HOM05D004551 ORTHO05D005262 1.2e-33 146.4 98 74.5
Migut.J00249 Erythranthe guttata HOM05D004551 ORTHO05D005262 2.1e-33 145.6 94 76.6
SalBow1G6960 Salvia bowleyana HOM05D004551 ORTHO05D005262 2.7e-33 145.2 93 77.4
Oeu036200.1 Olea europaea HOM05D004551 ORTHO05D005262 5.1e-32 141.0 96 70.8
Nitab4.5_0002152g0070 Nicotiana tabacum HOM05D004551 ORTHO05D005262 4.3e-31 137.9 91 73.6
Hma1.2p1_1521F.1_g288710 Hydrangea macrophylla HOM05D004551 ORTHO05D005262 7.4e-31 137.1 93 71.0
Glyma.02G308400 Glycine max HOM05D004551 ORTHO05D005262 3.7e-30 134.8 101 66.3
Glyma.15G034700 Glycine max HOM05D004551 ORTHO05D005262 4.8e-30 134.4 101 65.3
Peaxi162Scf01302g00041 Petunia axillaris HOM05D004551 ORTHO05D005262 4.8e-30 134.4 91 71.4
arahy.Tifrunner.gnm1.ann1.CMV3ZL Arachis hypogaea HOM05D004551 ORTHO05D005262 6.3e-30 134.0 99 65.7
Oeu017418.1 Olea europaea HOM05D004551 ORTHO05D005262 6.3e-30 134.0 92 70.7
arahy.Tifrunner.gnm1.ann1.S44GTI Arachis hypogaea HOM05D004551 ORTHO05D005262 1.4e-29 132.9 99 65.7
Dinv35533 Davidia involucrata HOM05D004551 ORTHO05D005262 1.4e-29 132.9 92 68.5
Solyc09g011760.3 Solanum lycopersicum HOM05D004551 ORTHO05D005262 1.8e-29 132.5 89 73.0
Sopen09g006580 Solanum pennellii HOM05D004551 ORTHO05D005262 1.8e-29 132.5 89 73.0
Prupe.6G065200 Prunus persica HOM05D004551 ORTHO05D005262 3.1e-29 131.7 96 67.7
PGSC0003DMG402020339 Solanum tuberosum HOM05D004551 ORTHO05D005262 4.1e-29 131.3 89 71.9
CSS0032515 Camellia sinensis var. sinensis HOM05D004551 ORTHO05D005262 5.3e-29 131.0 93 67.7
Phvul.008G288300 Phaseolus vulgaris HOM05D004551 ORTHO05D005262 5.3e-29 131.0 101 65.3
FvH4_3g37430 Fragaria vesca HOM05D004551 ORTHO05D005262 6.9e-29 130.6 94 67.0
FAN11G1128 Fragaria x ananassa HOM05D004551 ORTHO05D005262 6.9e-29 130.6 94 67.0
FAN16G1443 Fragaria x ananassa HOM05D004551 ORTHO05D005262 6.9e-29 130.6 94 67.0
FAN25G2220 Fragaria x ananassa HOM05D004551 ORTHO05D005262 6.9e-29 130.6 94 67.0
FAN16G2867 Fragaria x ananassa HOM05D004551 ORTHO05D005262 9.0e-29 130.2 93 66.7
Glyma.13G339700 Glycine max HOM05D004551 ORTHO05D005262 9.0e-29 130.2 101 64.4
Lj3g0011983 Lotus japonicus HOM05D004551 ORTHO05D005262 9.0e-29 130.2 94 66.0
Psat5g285840 Pisum sativum HOM05D004551 ORTHO05D005262 9.0e-29 130.2 98 66.3
Lsat_1_v5_gn_9_25241 Lactuca sativa HOM05D004551 ORTHO05D005262 1.5e-28 129.4 92 68.5
Glyma.14G004700 Glycine max HOM05D004551 ORTHO05D005262 2.0e-28 129.0 97 68.0
Lj4g0001727 Lotus japonicus HOM05D004551 ORTHO05D005262 2.0e-28 129.0 94 64.9
HanXRQChr08g0237601 Helianthus annuus HOM05D004551 ORTHO05D005262 3.4e-28 128.3 92 68.5
Lalb_Chr24g0397121 Lupinus albus HOM05D004551 ORTHO05D005262 4.5e-28 127.9 92 66.3
Rhsim04G0164100 Rhododendron simsii HOM05D004551 ORTHO05D005262 5.9e-28 127.5 101 65.3
PSO339G1751 Papaver somniferum HOM05D004551 ORTHO05D005262 1.0e-27 126.7 94 64.9
PSO384G2886 Papaver somniferum HOM05D004551 ORTHO05D005262 1.0e-27 126.7 94 64.9
CDE02G0008 Ceratophyllum demersum HOM05D004551 ORTHO05D005262 1.3e-27 126.3 90 67.8
HanXRQChr09g0243371 Helianthus annuus HOM05D004551 ORTHO05D005262 1.3e-27 126.3 92 67.4
HanXRQChr09g0243381 Helianthus annuus HOM05D004551 ORTHO05D005262 1.3e-27 126.3 92 67.4
HanXRQChr02g0055991 Helianthus annuus HOM05D004551 ORTHO05D005262 1.7e-27 125.9 92 67.4
MBI05_g10286_MAGBIO Magnolia biondii HOM05D004551 ORTHO05D005262 2.2e-27 125.6 93 64.5
TPR.G6876 Trifolium pratense HOM05D004551 ORTHO05D005262 2.9e-27 125.2 92 64.1
CDE04G2361 Ceratophyllum demersum HOM05D004551 ORTHO05D005262 3.8e-27 124.8 88 68.2
Cc06_g01910 Coffea canephora HOM05D004551 ORTHO05D005262 3.8e-27 124.8 97 66.0
vmacro08615 Vaccinium macrocarpon HOM05D004551 ORTHO05D005262 3.8e-27 124.8 93 69.9
Ca_01298_v3 Cicer arietinum L. HOM05D004551 ORTHO05D005262 5.0e-27 124.4 101 61.4
FAN21G1099 Fragaria x ananassa HOM05D004551 ORTHO05D005262 5.0e-27 124.4 81 71.6
CAN.G978.3 Capsicum annuum HOM05D004551 ORTHO05D005262 2.5e-26 122.1 75 76.0
Zm00001eb211450 Zea mays HOM05D004551 ORTHO05D005262 2.5e-26 122.1 86 68.6
Lalb_Chr22g0352421 Lupinus albus HOM05D004551 ORTHO05D005262 2.1e-25 119.0 78 70.5
Medtr2g097870 Medicago truncatula HOM05D004551 ORTHO05D005262 2.1e-25 119.0 94 62.8
Hund18875 Selenicereus undatus HOM05D004551 ORTHO05D005262 4.6e-25 117.9 81 67.9
CARHR122870 Cardamine hirsuta HOM05D004551 ORTHO05D005262 7.9e-25 117.1 101 57.4
QL01p028907 Quercus lobata HOM05D004551 ORTHO05D005262 7.9e-25 117.1 97 61.9
Hma1.2p1_0543F.1_g175360 Hydrangea macrophylla HOM05D004551 ORTHO05D005262 1.4e-24 116.3 92 63.0
CSS0004921 Camellia sinensis var. sinensis HOM05D004551 ORTHO05D005262 2.3e-24 115.5 92 62.0
Glyma.15G229800 Glycine max HOM05D004551 ORTHO05D005262 3.0e-24 115.2 78 67.9
GSVIVG01024832001 Vitis vinifera HOM05D004551 ORTHO05D005262 3.9e-24 114.8 92 60.9
CiPaw.13G084300 Carya illinoinensis HOM05D004551 ORTHO05D005262 5.1e-24 114.4 101 59.4
MD11G1085200 Malus domestica HOM05D004551 ORTHO05D005262 5.1e-24 114.4 96 60.4
Pp3c1_35930 Physcomitrium patens HOM05D004551 ORTHO05D005262 5.1e-24 114.4 88 59.1
MD03G1080700 Malus domestica HOM05D004551 ORTHO05D005262 6.7e-24 114.0 73 71.2
AL4G24240 Arabidopsis lyrata HOM05D004551 ORTHO05D005262 8.8e-24 113.6 96 58.3
EL10Ac7g16095 Beta vulgaris HOM05D004551 ORTHO05D005262 8.8e-24 113.6 92 62.0
Os07g0243100 Oryza sativa ssp. japonica HOM05D004551 ORTHO05D005262 8.8e-24 113.6 82 64.6
THA.LOC104800711 Tarenaya hassleriana HOM05D004551 ORTHO05D005262 8.8e-24 113.6 92 57.6
Duzib168G2386 Durio zibethinus HOM05D004551 ORTHO05D005262 1.1e-23 113.2 93 59.1
Sp4g12260 Schrenkiella parvula HOM05D004551 ORTHO05D005262 1.1e-23 113.2 96 57.3
Aa31LG5G6930 Aethionema arabicum HOM05D004551 ORTHO05D005262 1.5e-23 112.8 92 58.7
Ciclev10029702m.g Citrus clementina HOM05D004551 ORTHO05D005262 1.5e-23 112.8 93 60.2
Gohir.A03G047200 Gossypium hirsutum HOM05D004551 ORTHO05D005262 1.5e-23 112.8 93 59.1
Gorai.003G126500 Gossypium raimondii HOM05D004551 ORTHO05D005262 1.5e-23 112.8 93 59.1
TWI75G0664 Tripterygium wilfordii HOM05D004551 ORTHO05D005262 1.5e-23 112.8 92 59.8
AT2G29530 Arabidopsis thaliana HOM05D004551 ORTHO05D005262 2.0e-23 112.5 92 59.8
Gohir.A05G091300 Gossypium hirsutum HOM05D004551 ORTHO05D005262 2.0e-23 112.5 102 57.8
Gohir.D05G092200 Gossypium hirsutum HOM05D004551 ORTHO05D005262 2.0e-23 112.5 102 57.8
Thecc.09G309400 Theobroma cacao HOM05D004551 ORTHO05D005262 2.0e-23 112.5 93 59.1
Dinv34317 Davidia involucrata HOM05D004551 ORTHO05D005262 2.5e-23 112.1 92 60.9
CiPaw.14G063000 Carya illinoinensis HOM05D004551 ORTHO05D005262 4.3e-23 111.3 101 57.4
Thhalv10017490m.g Eutrema salsugineum HOM05D004551 ORTHO05D005262 4.3e-23 111.3 92 58.7
Gorai.009G094700 Gossypium raimondii HOM05D004551 ORTHO05D005262 5.7e-23 110.9 102 56.9
Sed0000742 Sechium edule HOM05D004551 ORTHO05D005262 7.4e-23 110.5 96 58.3
Mapoly0052s0053 Marchantia polymorpha HOM05D004551 ORTHO05D005262 9.7e-23 110.2 85 60.0
Nn2g13555 Nelumbo nucifera HOM05D004551 ORTHO05D005262 1.3e-22 109.8 93 58.1
AagrBONN_evm.TU.Sc2ySwM_117.3522 Anthoceros agrestis HOM05D004551 ORTHO05D005262 1.7e-22 109.4 91 53.8
A04p22520 Brassica napus HOM05D004551 ORTHO05D005262 1.7e-22 109.4 96 55.2
A05p15870 Brassica napus HOM05D004551 ORTHO05D005262 2.2e-22 109.0 93 57.0
C04p21310 Brassica napus HOM05D004551 ORTHO05D005262 2.2e-22 109.0 93 57.0
ClCG03G001090 Citrullus lanatus HOM05D004551 ORTHO05D005262 2.2e-22 109.0 96 57.3
Cc01_g13610 Coffea canephora HOM05D004551 ORTHO05D005262 2.2e-22 109.0 82 63.4
MELO3C020586.2 Cucumis melo HOM05D004551 ORTHO05D005262 2.2e-22 109.0 96 57.3
CsaV3_1G035840 Cucumis sativus L. HOM05D004551 ORTHO05D005262 2.2e-22 109.0 96 57.3
Solyc06g005840.4 Solanum lycopersicum HOM05D004551 ORTHO05D005262 2.2e-22 109.0 86 61.6
Sopen06g001810 Solanum pennellii HOM05D004551 ORTHO05D005262 2.2e-22 109.0 86 61.6
PGSC0003DMG400020830 Solanum tuberosum HOM05D004551 ORTHO05D005262 2.2e-22 109.0 86 61.6
Carub.0004s1058 Capsella rubella HOM05D004551 ORTHO05D005262 2.8e-22 108.6 96 56.2
CANSAT54G1854 Cannabis sativa HOM05D004551 ORTHO05D005262 4.8e-22 107.8 91 59.3
Dinv17073 Davidia involucrata HOM05D004551 ORTHO05D005262 4.8e-22 107.8 77 66.2
Dinv43017 Davidia involucrata HOM05D004551 ORTHO05D005262 4.8e-22 107.8 77 66.2
COL.COLO4_19068 Corchorus olitorius HOM05D004551 ORTHO05D005262 6.3e-22 107.5 84 59.5
Os03g0825400 Oryza sativa ssp. japonica HOM05D004551 ORTHO05D005262 6.3e-22 107.5 92 58.7
vmacro03012 Vaccinium macrocarpon HOM05D004551 ORTHO05D005262 6.3e-22 107.5 76 67.1
BcaB02g10259 Brassica carinata HOM05D004551 ORTHO05D005262 8.2e-22 107.1 93 55.9
Haze_24227 Corylus avellana HOM05D004551 ORTHO05D005262 1.1e-21 106.7 76 67.1
Aqoxy1G00774 Aquilegia oxysepala HOM05D004551 ORTHO05D005262 1.4e-21 106.3 86 61.6
Actinidia08554 Actinidia chinensis HOM05D004551 ORTHO05D005262 2.4e-21 105.5 92 56.5
Ah.15g090420 Amaranthus hybridus HOM05D004551 ORTHO05D005262 2.4e-21 105.5 81 58.0
HPP92_018167 Vanilla planifolia HOM05D004551 ORTHO05D005262 3.1e-21 105.1 77 66.2
RcHm_v2.0_Chr5g0067321 Rosa chinensis HOM05D004551 ORTHO05D005262 5.3e-21 104.4 92 57.6
Potri.009G039600 Populus trichocarpa HOM05D004551 ORTHO05D005262 2.0e-20 102.4 84 54.8
Sed0006275 Sechium edule HOM05D004551 ORTHO05D005262 2.0e-20 102.4 87 58.6
Nitab4.5_0002405g0130 Nicotiana tabacum HOM05D004551 ORTHO05D005262 3.4e-20 101.7 75 65.3
Potri.001G246500 Populus trichocarpa HOM05D004551 ORTHO05D005262 3.4e-20 101.7 84 54.8
C04p58670 Brassica napus HOM05D004551 ORTHO05D005262 5.9e-20 100.9 108 49.1
SMO172G0051 Selaginella moellendorffii HOM05D004551 ORTHO05D005262 5.9e-20 100.9 81 54.3
BolC4t27387H Brassica oleracea HOM05D004551 ORTHO05D005262 7.7e-20 100.5 105 49.5
Sc12g0001090 Simmondsia chinensis HOM05D004551 ORTHO05D005262 1.0e-19 100.1 94 54.3
Oeu030799.1 Olea europaea HOM05D004551 ORTHO05D005262 2.2e-19 99.0 62 74.2
CBR_g3168 Chara braunii HOM05D004551 ORTHO05D005262 2.9e-19 98.6 76 56.6
Eucgr.B02289 Eucalyptus grandis HOM05D004551 ORTHO05D005262 3.8e-19 98.2 92 53.3
Nitab4.5_0000880g0120 Nicotiana tabacum HOM05D004551 ORTHO05D005262 6.5e-19 97.4 64 71.9
Zm00001eb063090 Zea mays HOM05D004551 ORTHO05D005262 1.1e-18 96.7 91 58.2
VMungo0647G0519 Vigna mungo HOM05D000879 ORTHO05D002864 3.2e-18 95.1 64 65.6
BraA04t17797Z Brassica rapa HOM05D004551 ORTHO05D005262 7.2e-18 94.0 125 42.4
Duzib150G1644 Durio zibethinus HOM05D004551 ORTHO05D005262 7.2e-18 94.0 93 51.6
QL02p091823 Quercus lobata HOM05D000741 ORTHO05D000506 9.4e-18 93.6 61 68.9
QL02p079044 Quercus lobata HOM05D004551 ORTHO05D005262 1.6e-17 92.8 60 70.0
Sabra16G0149600 Salix brachista HOM05D004551 ORTHO05D005262 1.6e-17 92.8 76 56.6
Manes.01G166600 Manihot esculenta HOM05D004551 ORTHO05D005262 2.7e-17 92.0 84 52.4
Duzib170G1093 Durio zibethinus HOM05D004551 ORTHO05D005262 3.6e-17 91.7 84 53.6
ECA236G0522 Erigeron canadensis HOM05D004551 ORTHO05D005262 3.6e-17 91.7 70 64.3
Manes.02G124000 Manihot esculenta HOM05D004551 ORTHO05D005262 3.6e-17 91.7 84 51.2
BraA05t20500Z Brassica rapa HOM05D004551 ORTHO05D005262 6.1e-17 90.9 92 51.1
AUR62020055 Chenopodium quinoa HOM05D004551 ORTHO05D005262 6.1e-17 90.9 81 58.0
Phvul.L008843 Phaseolus vulgaris HOM05D004551 ORTHO05D005262 1.0e-16 90.1 97 50.5
Ah.13g070320 Amaranthus hybridus HOM05D004551 ORTHO05D005262 1.4e-16 89.7 65 64.6
MCO07G332 Micromonas commoda HOM05D004551 ORTHO05D005262 3.9e-16 88.2 67 53.7
DCAR_005918 Daucus carota HOM05D004551 ORTHO05D005262 5.1e-16 87.8 81 53.1
PGR102G3288 Punica granatum HOM05D004551 ORTHO05D005262 5.1e-16 87.8 77 58.4
HPP92_018179 Vanilla planifolia HOM05D004551 ORTHO05D005262 6.7e-16 87.4 56 73.2
Gohir.D03G120000 Gossypium hirsutum HOM05D004551 ORTHO05D005262 1.5e-15 86.3 93 49.5
ECA247G0999 Erigeron canadensis HOM05D004551 ORTHO05D005262 4.4e-15 84.7 90 48.9
EL10Ac7g17098 Beta vulgaris HOM05D004551 ORTHO05D005262 7.4e-15 84.0 107 42.1
Atru.chr3.4045 Acer truncatum HOM05D004551 ORTHO05D005262 9.7e-15 83.6 80 51.2
BolC4t23660H Brassica oleracea HOM05D004551 ORTHO05D005262 2.2e-14 82.4 66 57.6
DCAR_007410 Daucus carota HOM05D004551 ORTHO05D005262 1.8e-13 79.3 81 49.4
TPR.G13621 Trifolium pratense HOM05D004551 ORTHO05D005262 4.1e-13 78.2 44 75.0
SGA_v2.0_scaffold75G24985 Striga asiatica HOM05D001002 ORTHO05D000802 5.3e-13 77.8 44 79.5
BcaB06g28317 Brassica carinata HOM05D004551 ORTHO05D005262 7.0e-13 77.4 93 43.0
Cre12.g514900 Chlamydomonas reinhardtii HOM05D004551 ORTHO05D005262 2.6e-12 75.5 76 42.1
Rhsim13G0075400 Rhododendron simsii HOM05D004551 ORTHO05D005262 4.5e-12 74.7 76 51.3
AUR62001717 Chenopodium quinoa HOM05D004551 ORTHO05D005262 1.3e-11 73.2 114 40.4
MD02G1203300 Malus domestica HOM05D004551 ORTHO05D005262 1.5e-10 69.7 54 63.0
MD02G1278800 Malus domestica HOM05D004551 ORTHO05D005262 3.0e-08 62.0 63 49.2
SHI22087 Sapria himalayana HOM05D004551 ORTHO05D005262 1.5e-07 59.7 55 50.9


User provided reference genes

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