Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4318 Utricularia gibba HOM05D004042 ORTHO05D004552 2.7e-288 994.6 490 100.0
Migut.J00573 Erythranthe guttata HOM05D004042 ORTHO05D004552 1.2e-198 696.8 545 66.8
MSTRG.19492 Avicennia marina HOM05D004042 ORTHO05D004552 2.5e-193 679.1 538 64.1
Oeu051295.1 Olea europaea HOM05D004042 ORTHO05D004552 2.2e-181 639.4 526 64.4
Cc06_g11620 Coffea canephora HOM05D004042 ORTHO05D004552 8.5e-181 637.5 423 71.6
Oeu054835.1 Olea europaea HOM05D004042 ORTHO05D004552 2.5e-180 636.0 524 63.5
Psat7g044040 Pisum sativum HOM05D004042 ORTHO05D004552 5.5e-180 634.8 503 65.4
QL02p062121 Quercus lobata HOM05D004042 ORTHO05D004552 1.4e-178 630.2 513 63.2
Ciclev10008048m.g Citrus clementina HOM05D004042 ORTHO05D004552 1.8e-178 629.8 429 71.3
Cfa003057 Carpinus fangiana HOM05D004042 ORTHO05D004552 3.9e-178 628.6 526 62.5
Haze_25938 Corylus avellana HOM05D004042 ORTHO05D004552 5.1e-178 628.2 526 62.0
TPR.G9438 Trifolium pratense HOM05D004042 ORTHO05D004552 8.8e-178 627.5 508 64.4
CiPaw.03G212500 Carya illinoinensis HOM05D004042 ORTHO05D004552 1.5e-177 626.7 529 61.2
GSVIVG01015174001 Vitis vinifera HOM05D004042 ORTHO05D004552 3.3e-177 625.5 421 71.5
Aqoxy7G01162 Aquilegia oxysepala HOM05D004042 ORTHO05D004552 9.7e-177 624.0 443 70.4
Medtr4g125980 Medicago truncatula HOM05D004042 ORTHO05D004552 2.8e-176 622.5 499 64.1
Glyma.17G053300 Glycine max HOM05D004042 ORTHO05D004552 1.8e-175 619.8 514 61.7
Atru.chr7.1627 Acer truncatum HOM05D004042 ORTHO05D004552 1.2e-174 617.1 448 67.9
Glyma.13G106100 Glycine max HOM05D004042 ORTHO05D004552 1.2e-174 617.1 512 61.9
Thecc.09G085400 Theobroma cacao HOM05D004042 ORTHO05D004552 4.5e-174 615.1 525 62.5
CiPaw.04G147900 Carya illinoinensis HOM05D004042 ORTHO05D004552 5.9e-174 614.8 519 61.7
Lj4g0002498 Lotus japonicus HOM05D004042 ORTHO05D004552 5.9e-174 614.8 474 65.6
Prupe.7G206100 Prunus persica HOM05D004042 ORTHO05D004552 5.9e-174 614.8 537 60.3
DCAR_028272 Daucus carota HOM05D004042 ORTHO05D004552 7.7e-174 614.4 473 66.2
Solyc07g040740.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 7.7e-174 614.4 461 65.5
THA.LOC104814629 Tarenaya hassleriana HOM05D004042 ORTHO05D004552 1.7e-173 613.2 448 68.3
VMungo1215G0315 Vigna mungo HOM05D004042 ORTHO05D004552 1.7e-173 613.2 513 61.6
MD15G1210700 Malus domestica HOM05D004042 ORTHO05D004552 5.0e-173 611.7 518 62.2
TPR.G29533 Trifolium pratense HOM05D004042 ORTHO05D004552 6.5e-173 611.3 512 61.5
MD02G1082600 Malus domestica HOM05D004042 ORTHO05D004552 8.5e-173 610.9 523 61.0
Psat1g132200 Pisum sativum HOM05D004042 ORTHO05D004552 8.5e-173 610.9 509 61.1
Duzib168G0739 Durio zibethinus HOM05D004042 ORTHO05D004552 1.1e-172 610.5 402 74.1
Phvul.003G134900 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 1.1e-172 610.5 514 61.1
Lalb_Chr08g0232371 Lupinus albus HOM05D004042 ORTHO05D004552 2.5e-172 609.4 443 67.5
Potri.018G066100 Populus trichocarpa HOM05D004042 ORTHO05D004552 3.2e-172 609.0 440 68.6
Sopen07g019480 Solanum pennellii HOM05D004042 ORTHO05D004552 4.2e-172 608.6 460 65.4
Medtr2g039940 Medicago truncatula HOM05D004042 ORTHO05D004552 1.2e-171 607.1 506 62.5
PGR142G2341 Punica granatum HOM05D004042 ORTHO05D004552 1.6e-171 606.7 532 60.3
Phvul.009G230700 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 2.1e-171 606.3 500 62.4
Glyma.09G065300 Glycine max HOM05D004042 ORTHO05D004552 2.7e-171 605.9 513 61.6
CAN.G57.12 Capsicum annuum HOM05D004042 ORTHO05D004552 1.8e-170 603.2 508 61.4
Gorai.001G013100 Gossypium raimondii HOM05D004042 ORTHO05D004552 1.8e-170 603.2 452 66.2
Sc08g0008580 Simmondsia chinensis HOM05D004042 ORTHO05D004552 3.9e-170 602.1 424 70.5
Dinv42339 Davidia involucrata HOM05D004042 ORTHO05D004552 5.1e-170 601.7 397 73.3
Gohir.D07G012400 Gossypium hirsutum HOM05D004042 ORTHO05D004552 5.1e-170 601.7 452 65.7
MELO3C004632.2 Cucumis melo HOM05D004042 ORTHO05D004552 1.1e-169 600.5 426 69.2
Gohir.A07G012600 Gossypium hirsutum HOM05D004042 ORTHO05D004552 1.1e-169 600.5 495 61.8
TAR624G0704 Trochodendron aralioides HOM05D004042 ORTHO05D004552 1.5e-169 600.1 512 62.3
CsaV3_2G001380 Cucumis sativus L. HOM05D004042 ORTHO05D004552 7.4e-169 597.8 426 69.2
Sed0015499 Sechium edule HOM05D004042 ORTHO05D004552 1.3e-168 597.0 524 59.9
PGSC0003DMG400000274 Solanum tuberosum HOM05D004042 ORTHO05D004552 1.7e-168 596.7 460 65.4
HanXRQChr03g0060291 Helianthus annuus HOM05D004042 ORTHO05D004552 3.7e-168 595.5 471 64.3
HanXRQChr10g0319461 Helianthus annuus HOM05D004042 ORTHO05D004552 3.7e-168 595.5 525 58.5
ATR0789G051 Amborella trichopoda HOM05D004042 ORTHO05D004552 1.1e-167 594.0 513 59.6
HanXRQChr12g0354671 Helianthus annuus HOM05D004042 ORTHO05D004552 1.4e-167 593.6 424 68.9
PSO063G3240 Papaver somniferum HOM05D004042 ORTHO05D004552 1.4e-167 593.6 418 69.4
CANSAT56G0725 Cannabis sativa HOM05D004042 ORTHO05D004552 1.8e-167 593.2 531 58.4
Solyc12g008970.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 2.4e-167 592.8 495 62.4
Sopen12g003900 Solanum pennellii HOM05D004042 ORTHO05D004552 2.4e-167 592.8 488 62.9
TWI32G1194 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 3.1e-167 592.4 500 62.6
FvH4_1g07910 Fragaria vesca HOM05D004042 ORTHO05D004552 4.1e-167 592.0 420 69.3
RcHm_v2.0_Chr2g0093781 Rosa chinensis HOM05D004042 ORTHO05D004552 4.1e-167 592.0 518 61.0
PSO832G2139 Papaver somniferum HOM05D004042 ORTHO05D004552 1.2e-166 590.5 503 60.2
CARHR109890 Cardamine hirsuta HOM05D004042 ORTHO05D004552 4.5e-166 588.6 506 61.3
Nn6g35535 Nelumbo nucifera HOM05D004042 ORTHO05D004552 7.7e-166 587.8 525 58.9
SGA_v2.0_scaffold91G28060 Striga asiatica HOM05D004042 ORTHO05D004552 1.0e-165 587.4 537 60.3
BcaB03g16730 Brassica carinata HOM05D004042 ORTHO05D004552 1.3e-165 587.0 427 67.9
BcaC06g36576 Brassica carinata HOM05D004042 ORTHO05D004552 5.0e-165 585.1 431 67.3
ECA234G2403 Erigeron canadensis HOM05D004042 ORTHO05D004552 5.0e-165 585.1 424 67.2
Lalb_Chr13g0299591 Lupinus albus HOM05D004042 ORTHO05D004552 5.0e-165 585.1 485 59.6
Sp3g32820 Schrenkiella parvula HOM05D004042 ORTHO05D004552 6.5e-165 584.7 509 61.3
C07p02710 Brassica napus HOM05D004042 ORTHO05D004552 8.5e-165 584.3 427 67.7
BolC7t40671H Brassica oleracea HOM05D004042 ORTHO05D004552 8.5e-165 584.3 427 67.7
Thhalv10022645m.g Eutrema salsugineum HOM05D004042 ORTHO05D004552 8.5e-165 584.3 448 66.3
AL3G48800 Arabidopsis lyrata HOM05D004042 ORTHO05D004552 1.1e-164 583.9 429 67.6
AT2G19450 Arabidopsis thaliana HOM05D004042 ORTHO05D004552 1.1e-164 583.9 429 67.6
Manes.16G100000 Manihot esculenta HOM05D004042 ORTHO05D004552 1.1e-164 583.9 446 65.0
Actinidia25240 Actinidia chinensis HOM05D004042 ORTHO05D004552 1.5e-164 583.6 492 62.2
A07p01320 Brassica napus HOM05D004042 ORTHO05D004552 1.5e-164 583.6 427 67.7
BraA07t27923Z Brassica rapa HOM05D004042 ORTHO05D004552 1.5e-164 583.6 427 67.7
Carub.0003s3373 Capsella rubella HOM05D004042 ORTHO05D004552 1.5e-164 583.6 499 60.9
BcaB07g31608 Brassica carinata HOM05D004042 ORTHO05D004552 1.9e-164 583.2 503 61.2
Lj6g0011849 Lotus japonicus HOM05D004042 ORTHO05D004552 1.9e-164 583.2 526 58.4
A09p12360 Brassica napus HOM05D004042 ORTHO05D004552 3.2e-164 582.4 467 64.0
C09p14580 Brassica napus HOM05D004042 ORTHO05D004552 3.2e-164 582.4 467 64.0
BraA09t36880Z Brassica rapa HOM05D004042 ORTHO05D004552 3.2e-164 582.4 467 64.0
CDE05G1317 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 4.2e-164 582.0 536 56.0
BcaC04g22852 Brassica carinata HOM05D004042 ORTHO05D004552 1.2e-163 580.5 503 60.8
BolC9t54364H Brassica oleracea HOM05D004042 ORTHO05D004552 1.2e-163 580.5 503 60.8
HPP92_005224 Vanilla planifolia HOM05D004042 ORTHO05D004552 1.6e-163 580.1 453 64.0
ClCG11G001680 Citrullus lanatus HOM05D004042 ORTHO05D004552 6.1e-163 578.2 525 58.7
Nitab4.5_0009216g0010 Nicotiana tabacum HOM05D004042 ORTHO05D004552 4.4e-161 572.0 579 56.0
PSO210G1704 Papaver somniferum HOM05D004042 ORTHO05D004552 9.7e-161 570.9 423 67.6
PSO210G6497 Papaver somniferum HOM05D004042 ORTHO05D004552 2.2e-160 569.7 423 67.4
FAN26G0253 Fragaria x ananassa HOM05D004042 ORTHO05D004552 4.8e-160 568.5 422 67.5
vmacro17139 Vaccinium macrocarpon HOM05D004042 ORTHO05D004552 4.8e-160 568.5 582 54.0
Zm00001eb277490 Zea mays HOM05D004042 ORTHO05D004552 8.2e-160 567.8 464 61.2
FAN26G3195 Fragaria x ananassa HOM05D004042 ORTHO05D004552 1.8e-159 566.6 422 67.3
FAN28G1686 Fragaria x ananassa HOM05D004042 ORTHO05D004552 3.1e-159 565.8 508 60.0
Os06g0563900 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 1.7e-157 560.1 428 64.5
TWI63G1034 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 6.5e-157 558.1 495 60.0
FAN23G0463 Fragaria x ananassa HOM05D004042 ORTHO05D004552 1.2e-155 553.9 509 60.1
FAN19G1831 Fragaria x ananassa HOM05D004042 ORTHO05D004552 2.7e-155 552.7 509 59.1
Potri.006G147600 Populus trichocarpa HOM05D004042 ORTHO05D004552 5.2e-154 548.5 438 62.8
Aa31LG8G16450 Aethionema arabicum HOM05D004042 ORTHO05D004552 8.8e-154 547.7 512 60.2
arahy.Tifrunner.gnm1.ann1.MYU01D Arachis hypogaea HOM05D004042 ORTHO05D004552 1.5e-153 547.0 491 58.2
Peaxi162Scf00498g00448 Petunia axillaris HOM05D004042 ORTHO05D004552 6.3e-152 541.6 449 63.5
Os05g0196800 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 1.6e-150 537.0 420 62.1
SalBow6G0873 Salvia bowleyana HOM05D004042 ORTHO05D004552 5.5e-148 528.5 538 55.6
CAN.G1583.6 Capsicum annuum HOM05D004042 ORTHO05D004552 8.8e-146 521.2 374 66.0
Lj7C679G4 Lonicera japonica HOM05D004042 ORTHO05D004552 2.2e-144 516.5 491 58.2
Lsat_1_v5_gn_5_143061 Lactuca sativa HOM05D004042 ORTHO05D004552 4.1e-143 512.3 528 55.3
Mapoly0012s0121 Marchantia polymorpha HOM05D004042 ORTHO05D004552 1.2e-142 510.8 509 51.9
arahy.Tifrunner.gnm1.ann1.MZM9C8 Arachis hypogaea HOM05D004042 ORTHO05D004552 1.6e-142 510.4 576 50.9
Oeu032802.1 Olea europaea HOM05D004042 ORTHO05D004552 4.5e-142 508.8 499 56.9
AagrBONN_evm.TU.Sc2ySwM_117.1233 Anthoceros agrestis HOM05D004042 ORTHO05D004552 1.7e-141 506.9 474 54.2
AagrBONN_evm.TU.Sc2ySwM_344.3248 Anthoceros agrestis HOM05D004042 ORTHO05D004552 1.7e-141 506.9 480 54.8
SMO356G0470 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 1.7e-141 506.9 417 60.7
CSS0045629 Camellia sinensis var. sinensis HOM05D004042 ORTHO05D004552 1.1e-140 504.2 406 65.0
Dinv36786 Davidia involucrata HOM05D004042 ORTHO05D004552 3.0e-138 496.1 444 59.5
Pp3c15_23830 Physcomitrium patens HOM05D004042 ORTHO05D004552 3.0e-138 496.1 430 58.1
Nitab4.5_0001519g0080 Nicotiana tabacum HOM05D004042 ORTHO05D004552 6.8e-138 495.0 554 53.1
Rhsim05G0016600 Rhododendron simsii HOM05D004042 ORTHO05D004552 1.5e-137 493.8 625 49.0
HPP92_003981 Vanilla planifolia HOM05D004042 ORTHO05D004552 4.9e-136 488.8 389 62.2
TAR636G2477 Trochodendron aralioides HOM05D004042 ORTHO05D004552 1.2e-134 484.2 444 59.5
Eucgr.C03419 Eucalyptus grandis HOM05D004042 ORTHO05D004552 1.0e-133 481.1 350 67.7
arahy.Tifrunner.gnm1.ann1.W5L64F Arachis hypogaea HOM05D004042 ORTHO05D004552 3.9e-133 479.2 522 53.4
Nitab4.5_0002824g0090 Nicotiana tabacum HOM05D004042 ORTHO05D004552 9.8e-129 464.5 412 60.0
EL10Ac8g19178 Beta vulgaris HOM05D004042 ORTHO05D004552 2.0e-126 456.8 529 50.5
arahy.Tifrunner.gnm1.ann1.5W0QMQ Arachis hypogaea HOM05D004042 ORTHO05D004552 1.3e-125 454.1 517 51.8
DCAR_011961 Daucus carota HOM05D004042 ORTHO05D004552 4.3e-124 449.1 368 61.7
Ca_13125_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 3.6e-123 446.0 468 53.8
Pp3c9_24440 Physcomitrium patens HOM05D004042 ORTHO05D004552 4.0e-122 442.6 397 57.7
Lalb_Chr11g0074521 Lupinus albus HOM05D004042 ORTHO05D004552 3.4e-121 439.5 362 62.2
Ca_21290_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 6.4e-120 435.3 389 62.2
Manes.03G036000 Manihot esculenta HOM05D004042 ORTHO05D004552 3.5e-118 429.5 484 51.2
Zm00001eb284200 Zea mays HOM05D004042 ORTHO05D004552 2.3e-117 426.8 353 60.9
Sabra06G0116600 Salix brachista HOM05D004042 ORTHO05D004552 1.9e-116 423.7 361 60.1
Peaxi162Scf00494g00077 Petunia axillaris HOM05D004042 ORTHO05D004552 9.5e-116 421.4 461 52.9
Sabra18G0058600 Salix brachista HOM05D004042 ORTHO05D004552 1.6e-115 420.6 406 58.1
Hund06663 Selenicereus undatus HOM05D004042 ORTHO05D004552 2.6e-113 413.3 391 58.8
Hund25994 Selenicereus undatus HOM05D004042 ORTHO05D004552 1.1e-111 407.9 318 64.5
Nitab4.5_0002642g0100 Nicotiana tabacum HOM05D004042 ORTHO05D004552 1.6e-110 404.1 416 53.4
AUR62029034 Chenopodium quinoa HOM05D004042 ORTHO05D004552 2.1e-110 403.7 311 66.2
AagrBONN_evm.TU.Sc2ySwM_344.1721 Anthoceros agrestis HOM05D004042 ORTHO05D004552 4.2e-103 379.4 348 57.2
CDE05G1467 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 2.1e-94 350.5 387 53.5
VMungo1309G0638 Vigna mungo HOM05D004042 ORTHO05D004552 1.1e-92 344.7 382 51.6
Sc18g0002260 Simmondsia chinensis HOM05D004042 ORTHO05D004552 2.7e-86 323.6 278 60.8
PRCOL_00002371 Prasinoderma coloniale HOM05D004042 ORTHO05D004552 7.4e-84 315.5 440 41.6
Hma1.2p1_0672F.1_g201026 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 2.7e-78 297.0 210 69.0
AUR62033935 Chenopodium quinoa HOM05D004042 ORTHO05D004552 3.8e-72 276.6 210 67.6
PGSC0003DMG400032788 Solanum tuberosum HOM05D004042 ORTHO05D004552 2.5e-71 273.9 302 53.0
Cpa.g.sc737.2 Carica papaya HOM05D004042 ORTHO05D004552 4.6e-70 269.6 149 79.2
COL.COLO4_18176 Corchorus olitorius HOM05D004042 ORTHO05D004552 1.4e-66 258.1 171 76.0
SMO361G0462 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 7.9e-62 242.3 187 59.4
Cre01.g045903 Chlamydomonas reinhardtii HOM05D004042 ORTHO05D004552 3.0e-61 240.4 166 61.4
FAN28G2747 Fragaria x ananassa HOM05D004042 ORTHO05D004552 1.1e-60 238.4 388 39.4
Haze_27058 Corylus avellana HOM05D004042 ORTHO05D004552 4.8e-59 233.0 377 36.1
Cpa.g.sc737.3 Carica papaya HOM05D004042 ORTHO05D004552 1.6e-49 201.4 206 53.4
PGSC0003DMG400032789 Solanum tuberosum HOM05D004042 ORTHO05D004552 1.0e-45 188.7 104 80.8
Lj4C291G3 Lonicera japonica HOM05D004042 ORTHO05D004552 7.5e-44 182.6 199 55.8
Cfa021676 Carpinus fangiana HOM05D004042 ORTHO05D004552 2.2e-43 181.0 473 30.7
Hma1.2p1_0672F.1_g201023 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 1.4e-42 178.3 154 61.7
Peaxi162Scf00126g01028 Petunia axillaris HOM05D004042 ORTHO05D004552 3.2e-18 97.4 47 89.4
Glyma.15G171700 Glycine max HOM05D004042 ORTHO05D004552 3.3e-15 87.4 51 74.5
PSO765G0232 Papaver somniferum HOM05D004042 ORTHO05D004552 4.3e-15 87.0 120 49.2
Lalb_Chr11g0074531 Lupinus albus HOM05D004042 ORTHO05D004552 3.6e-14 84.0 48 75.0
Cfa025900 Carpinus fangiana HOM05D004042 ORTHO05D123407 2.0e-12 78.2 186 28.0
Cfa024924 Carpinus fangiana HOM05D004042 ORTHO05D004552 2.6e-12 77.8 158 32.9
SEGI_28032 Sequoiadendron giganteum HOM05D004042 ORTHO05D004552 8.3e-11 72.8 63 55.6
Sabra18G0058500 Salix brachista HOM05D004042 ORTHO05D004552 1.6e-09 68.6 106 36.8
AUR62029035 Chenopodium quinoa HOM05D004042 ORTHO05D004552 1.5e-07 62.0 37 70.3
PSO339G6631 Papaver somniferum HOM05D002947 ORTHO05D037275 7.3e-07 59.7 54 55.6
PSO266G0038 Papaver somniferum HOM05D002947 ORTHO05D037275 1.2e-06 58.9 44 63.6


User provided reference genes

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