Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4107 Utricularia gibba HOM05D000963 ORTHO05D011117 4.4e-80 301.2 150 100.0
Sopen06g015040 Solanum pennellii HOM05D000963 ORTHO05D011117 2.3e-76 288.9 150 96.0
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 8.4e-47 190.7 106 92.5
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 8.4e-47 190.7 106 92.5
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 8.4e-47 190.7 108 88.9
MELO3C033790.2 Cucumis melo HOM05D000963 ORTHO05D011117 1.3e-44 183.3 95 97.9
BcaC04g20703 Brassica carinata HOM05D000963 ORTHO05D011117 3.0e-44 182.2 96 94.8
BcaC04g20780 Brassica carinata HOM05D000963 ORTHO05D011117 3.0e-44 182.2 96 94.8
BcaNung07084 Brassica carinata HOM05D000963 ORTHO05D011117 3.0e-44 182.2 96 94.8
C04p22530 Brassica napus HOM05D000963 ORTHO05D011117 3.0e-44 182.2 96 94.8
C09p24690 Brassica napus HOM05D000963 ORTHO05D011117 3.0e-44 182.2 96 94.8
C09p39370 Brassica napus HOM05D000963 ORTHO05D011117 3.0e-44 182.2 96 94.8
BolSC47t61068H Brassica oleracea HOM05D000963 ORTHO05D011117 3.0e-44 182.2 96 94.8
Cpa.g.sc2719.1 Carica papaya HOM05D000963 ORTHO05D011117 1.1e-43 180.3 96 93.8
arahy.Tifrunner.gnm1.ann1.URY1CV Arachis hypogaea HOM05D000533 ORTHO05D011117 1.5e-43 179.9 96 94.8
MELO3C027127.2 Cucumis melo HOM05D000963 ORTHO05D011117 3.3e-43 178.7 95 95.8
Oeu038562.1 Olea europaea HOM05D000963 ORTHO05D011117 3.4e-40 168.7 96 90.6
CSS0012622 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D011117 9.9e-40 167.2 96 88.5
PGSC0003DMG400039021 Solanum tuberosum HOM05D000963 ORTHO05D010201 2.4e-38 162.5 96 85.4
arahy.Tifrunner.gnm1.ann1.UXAL1K Arachis hypogaea HOM05D000963 ORTHO05D011117 1.2e-37 160.2 94 87.2
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 1.9e-35 152.9 94 84.0
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 1.5e-32 143.3 74 95.9
MELO3C028157.2 Cucumis melo HOM05D000963 ORTHO05D011117 5.8e-32 141.4 71 98.6
Sopen01g027140 Solanum pennellii HOM05D000963 ORTHO05D011117 8.4e-31 137.5 97 75.3
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 3.3e-27 125.6 70 91.4
BcaB02g11354 Brassica carinata HOM05D000963 ORTHO05D011117 7.4e-27 124.4 66 92.4
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 2.1e-26 122.9 63 95.2
MELO3C028252.2 Cucumis melo HOM05D000963 ORTHO05D011117 8.2e-26 120.9 62 96.8
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 1.5e-24 116.7 62 91.9
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 7.4e-19 97.8 55 90.9
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 6.3e-18 94.7 50 92.0
TAR629G1823 Trochodendron aralioides HOM05D001041 ORTHO05D000846 1.1e-17 94.0 56 87.5
VMungo1024G0004 Vigna mungo HOM05D000963 ORTHO05D011117 3.1e-17 92.4 70 65.7
arahy.Tifrunner.gnm1.ann1.H1VL0A Arachis hypogaea HOM05D000963 ORTHO05D011117 2.0e-16 89.7 66 69.7
MELO3C030559.2 Cucumis melo HOM05D000963 ORTHO05D011117 6.5e-15 84.7 41 95.1
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 1.4e-14 83.6 43 93.0
BraSC143t45648Z Brassica rapa HOM05D000963 ORTHO05D011117 2.5e-14 82.8 42 90.5
BcaC04g22599 Brassica carinata HOM05D000963 ORTHO05D011117 1.2e-13 80.5 40 92.5
Gohir.D12G186150 Gossypium hirsutum HOM05D000963 ORTHO05D011117 2.7e-13 79.3 47 83.0
EL10Ac6g15367 Beta vulgaris HOM05D000963 ORTHO05D011117 4.6e-13 78.6 78 61.5
Hma1.2p1_0016F.1_g010990 Hydrangea macrophylla HOM05D000963 ORTHO05D011117 6.1e-13 78.2 43 88.4
BraSC58t46452Z Brassica rapa HOM05D000963 ORTHO05D011117 3.0e-12 75.9 43 86.0
BraSC138t45525Z Brassica rapa HOM05D000963 ORTHO05D011117 1.5e-11 73.6 41 90.2
Oeu012784.1 Olea europaea HOM05D000963 ORTHO05D005131 7.4e-11 71.2 43 79.1
arahy.Tifrunner.gnm1.ann1.NK9AGX Arachis hypogaea HOM05D000089 ORTHO05D011117 1.7e-10 70.1 38 92.1
Sc22g0004610 Simmondsia chinensis HOM05D000963 ORTHO05D011117 2.4e-09 66.2 42 78.6
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 5.3e-09 65.1 39 74.4
Ca_03776_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 9.1e-09 64.3 36 91.7
Ca_03777_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 9.1e-09 64.3 36 91.7
SHI36891 Sapria himalayana HOM05D000963 ORTHO05D011117 2.0e-08 63.2 32 96.9
Cfa023002 Carpinus fangiana HOM05D000963 ORTHO05D011117 8.5e-07 57.8 29 89.7
arahy.Tifrunner.gnm1.ann1.BMCQ1I Arachis hypogaea HOM05D000963 ORTHO05D005131 2.5e-06 56.2 33 84.8
Solyc10g047410.1 Solanum lycopersicum HOM05D000890 ORTHO05D000697 4.2e-06 55.5 31 83.9
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 7.2e-06 54.7 38 76.3


User provided reference genes

Program Settings