Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 1.0e-111 406.8 205 100.0
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 4.7e-109 397.9 205 98.5
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 4.7e-109 397.9 205 98.5
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 9.8e-107 390.2 201 98.5
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 6.4e-106 387.5 205 97.1
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 2.7e-104 382.1 227 88.5
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 2.7e-104 382.1 227 88.5
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.6e-93 345.1 207 88.4
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 3.4e-91 338.6 243 77.4
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 1.6e-85 319.7 215 81.9
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.9e-82 308.9 207 80.2
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 1.6e-80 303.1 156 98.7
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 1.6e-72 276.6 200 76.5
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 1.9e-70 269.6 193 77.2
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 6.2e-69 264.6 171 81.3
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 1.8e-68 263.1 202 72.3
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 1.2e-64 250.4 207 70.0
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.6e-64 250.0 166 81.3
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 1.6e-61 240.0 201 69.2
unitig_87.g28036 Utricularia gibba HOM05D000963 ORTHO05D005131 2.1e-61 239.6 140 89.3
SGA_v2.0_scaffold893G53701 Striga asiatica HOM05D000963 ORTHO05D005131 6.9e-60 234.6 140 87.9
vmacro22396 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 3.4e-59 232.3 140 87.9
vmacro22416 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 3.4e-59 232.3 140 87.9
vmacro22421 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 3.4e-59 232.3 140 87.9
RhsimPtG0005500 Rhododendron simsii HOM05D000963 ORTHO05D005131 1.4e-57 226.9 140 85.7
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 5.5e-57 224.9 178 71.3
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.6e-56 223.4 140 85.7
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 1.0e-55 220.7 153 79.1
PGSC0003DMG400020295 Solanum tuberosum HOM05D000963 ORTHO05D005131 5.1e-55 218.4 125 91.2
PGSC0003DMG400001215 Solanum tuberosum HOM05D000963 ORTHO05D005131 6.1e-48 194.9 148 72.3
SHI37614 Sapria himalayana HOM05D000963 ORTHO05D005131 1.5e-46 190.3 113 88.5
PGSC0003DMG400046976 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.5e-46 190.3 125 81.6
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 2.6e-46 189.5 227 55.5
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 4.1e-44 182.2 123 79.7
SHI47131 Sapria himalayana HOM05D000963 ORTHO05D005131 1.1e-41 174.1 102 88.2
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 2.5e-41 172.9 182 58.8
SHI42531 Sapria himalayana HOM05D000963 ORTHO05D005131 5.5e-41 171.8 103 86.4
arahy.Tifrunner.gnm1.ann1.ZFFY2U Arachis hypogaea HOM05D000963 ORTHO05D005131 1.2e-40 170.6 148 64.9
VMungo0720G2312 Vigna mungo HOM05D000963 ORTHO05D005131 2.3e-39 166.4 83 100.0
arahy.Tifrunner.gnm1.ann1.J9XL5M Arachis hypogaea HOM05D000963 ORTHO05D005131 7.4e-38 161.4 83 97.6
MBI08_g48228_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 1.8e-36 156.8 78 100.0
HPP92_028387 Vanilla planifolia HOM05D000963 ORTHO05D005131 4.1e-36 155.6 84 92.9
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 3.5e-35 152.5 150 62.0
arahy.Tifrunner.gnm1.ann1.LWFR1C Arachis hypogaea HOM05D000963 ORTHO05D005131 5.9e-35 151.8 78 97.4
Migut.D01379 Erythranthe guttata HOM05D000963 ORTHO05D005131 5.0e-34 148.7 138 64.5
SHI36890 Sapria himalayana HOM05D000963 ORTHO05D005131 5.0e-34 148.7 74 98.6
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 1.6e-32 143.7 73 98.6
TAR365G0238 Trochodendron aralioides HOM05D001325 ORTHO05D001540 1.6e-32 143.7 73 98.6
SalBow6G4874 Salvia bowleyana HOM05D000963 ORTHO05D005131 2.1e-32 143.3 114 73.7
unitig_91.g26518 Utricularia gibba HOM05D001325 ORTHO05D001540 2.1e-32 143.3 91 84.6
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 2.1e-32 143.3 91 84.6
Sc25g0002000 Simmondsia chinensis HOM05D000963 ORTHO05D005131 8.0e-32 141.4 81 88.9
Hund25913 Selenicereus undatus HOM05D000963 ORTHO05D005131 1.4e-31 140.6 94 79.8
Lsat_1_v5_gn_9_35301 Lactuca sativa HOM05D000963 ORTHO05D005131 3.0e-31 139.4 78 85.9
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 4.0e-31 139.0 114 71.9
Hma1.2p1_0045F.1_g026530 Hydrangea macrophylla HOM05D000963 ORTHO05D005131 1.7e-29 133.7 84 83.3
arahy.Tifrunner.gnm1.ann1.UXAL1K Arachis hypogaea HOM05D000963 ORTHO05D011117 2.8e-29 132.9 67 97.0
Sc05g0004060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 3.7e-29 132.5 102 73.5
Gohir.D04G090233 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.8e-29 132.1 73 91.8
MBI13_g30267_MAGBIO Magnolia biondii HOM05D000571 ORTHO05D000435 6.3e-29 131.7 73 91.8
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 8.2e-29 131.3 85 82.4
Sc14g0005060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 2.4e-28 129.8 93 76.3
vmacro09305 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 4.1e-28 129.0 143 58.0
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 7.0e-28 128.3 73 90.4
C06p23110 Brassica napus HOM05D000963 ORTHO05D005131 9.1e-28 127.9 97 72.2
C09p24700 Brassica napus HOM05D000963 ORTHO05D005131 9.1e-28 127.9 97 72.2
C09p39380 Brassica napus HOM05D000963 ORTHO05D005131 9.1e-28 127.9 97 72.2
BraSC143t45666Z Brassica rapa HOM05D000963 ORTHO05D005131 9.1e-28 127.9 97 72.2
BraSC25t45900Z Brassica rapa HOM05D000963 ORTHO05D005131 9.1e-28 127.9 97 72.2
BraSC59t46558Z Brassica rapa HOM05D000963 ORTHO05D005131 9.1e-28 127.9 97 72.2
Gohir.A01G056250 Gossypium hirsutum HOM05D000963 ORTHO05D005131 9.1e-28 127.9 85 78.8
Gohir.A13G086560 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.7e-27 124.8 126 61.1
TAR633G0621 Trochodendron aralioides HOM05D000963 ORTHO05D005131 1.3e-26 124.0 60 98.3
Gorai.012G100900 Gossypium raimondii HOM05D000963 ORTHO05D005131 1.7e-26 123.6 91 73.6
Gohir.D10G125850 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.5e-25 119.8 73 83.6
Cpa.g.sc389.2 Carica papaya HOM05D000963 ORTHO05D005131 5.5e-25 118.6 73 82.2
Sopen11g020190 Solanum pennellii HOM05D000963 ORTHO05D005131 1.6e-24 117.1 73 83.6
Gohir.A12G053150 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.7e-24 115.5 116 62.1
SEGI_13287 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 1.4e-23 114.0 209 43.1
Oeu012784.1 Olea europaea HOM05D000963 ORTHO05D005131 4.4e-22 109.0 66 83.3
Cpa.g.sc86.15 Carica papaya HOM05D000963 ORTHO05D005131 7.5e-22 108.2 77 72.7
MBI16_g46635_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 7.5e-22 108.2 94 63.8
Gohir.D09G105350 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.7e-21 105.9 66 80.3
SGA_v2.0_scaffold126G33874 Striga asiatica HOM05D000963 ORTHO05D005131 6.3e-21 105.1 112 57.1
Gorai.005G078000 Gossypium raimondii HOM05D000963 ORTHO05D005131 1.2e-19 100.9 74 73.0
Nitab4.5_0000017g0110 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.6e-19 100.5 56 89.3
Nitab4.5_0006211g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.6e-19 100.5 54 90.7
EL10Ac7g17438 Beta vulgaris HOM05D000963 ORTHO05D005131 2.9e-18 96.3 52 88.5
Migut.D01497 Erythranthe guttata HOM05D000963 ORTHO05D005131 6.5e-18 95.1 113 56.6
arahy.Tifrunner.gnm1.ann1.JE53Y0 Arachis hypogaea HOM05D000963 ORTHO05D005131 8.6e-18 94.7 48 95.8
vmacro09302 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 8.6e-18 94.7 62 80.6
Dinv44812 Davidia involucrata HOM05D000086 ORTHO05D000431 1.5e-17 94.0 53 83.0
Solyc01g017050.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 1.5e-17 94.0 49 91.8
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 4.2e-17 92.4 99 59.6
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 1.0e-15 87.8 138 47.8
VMungo1024G0002 Vigna mungo HOM05D000963 ORTHO05D005131 1.4e-15 87.4 68 67.6
Gohir.1Z049680 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.3e-15 86.7 49 83.7
Potri.007G062061 Populus trichocarpa HOM05D010604 ORTHO05D012476 8.8e-15 84.7 117 50.4
Nitab4.5_0008665g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.2e-14 84.3 71 64.8
VMungo0329G0006 Vigna mungo HOM05D010604 ORTHO05D012476 3.4e-14 82.8 233 35.2
Nitab4.5_0000729g0060 Nicotiana tabacum HOM05D000963 ORTHO05D005131 4.4e-14 82.4 57 70.2
arahy.Tifrunner.gnm1.ann1.D10MHU Arachis hypogaea HOM05D000963 ORTHO05D005131 5.7e-14 82.0 44 93.2
SEGI_10061 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 2.8e-13 79.7 120 45.8
Lsat_1_v5_gn_4_145420 Lactuca sativa HOM05D000963 ORTHO05D005131 3.7e-13 79.3 78 61.5
Medtr7g093213 Medicago truncatula HOM05D000963 ORTHO05D005131 3.7e-13 79.3 41 92.7
Sc25g0002260 Simmondsia chinensis HOM05D000963 ORTHO05D005131 8.3e-13 78.2 41 90.2
arahy.Tifrunner.gnm1.ann1.SH46T5 Arachis hypogaea HOM05D000963 ORTHO05D005131 2.4e-12 76.6 41 92.7
arahy.Tifrunner.gnm1.ann1.KZ3I51 Arachis hypogaea HOM05D010604 ORTHO05D012476 3.1e-12 76.3 148 42.6
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 4.1e-12 75.9 106 50.0
Sopen10g016560 Solanum pennellii HOM05D000963 ORTHO05D005131 1.6e-11 73.9 38 89.5
Gorai.002G152100 Gossypium raimondii HOM05D000963 ORTHO05D005131 2.0e-11 73.6 53 66.0
Gorai.007G303200 Gossypium raimondii HOM05D000963 ORTHO05D005131 2.7e-11 73.2 52 69.2
Gohir.D11G280866 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.8e-11 71.6 52 67.3
SHI36889 Sapria himalayana HOM05D000963 ORTHO05D005131 7.8e-11 71.6 37 94.6
ECA234G4679 Erigeron canadensis HOM05D000476 ORTHO05D004793 1.7e-10 70.5 37 89.2
Oeu012823.1 Olea europaea HOM05D000963 ORTHO05D005131 2.9e-10 69.7 68 61.8
BolSC46t60969H Brassica oleracea HOM05D000963 ORTHO05D005131 6.6e-10 68.6 36 94.4
Gohir.D01G121360 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.1e-09 67.8 53 60.4
TPR.G33662 Trifolium pratense HOM05D004957 ORTHO05D006741 1.1e-09 67.8 35 88.6
Sc22g0004610 Simmondsia chinensis HOM05D000963 ORTHO05D011117 2.5e-09 66.6 33 90.9
arahy.Tifrunner.gnm1.ann1.05XESX Arachis hypogaea HOM05D010604 ORTHO05D012476 7.3e-09 65.1 48 70.8
arahy.Tifrunner.gnm1.ann1.0LX666 Arachis hypogaea HOM05D010604 ORTHO05D012476 7.3e-09 65.1 48 70.8
CsaV3_UNG209450 Cucumis sativus L. HOM05D010604 ORTHO05D012476 4.7e-08 62.4 48 68.8
Lsat_1_v5_gn_4_50261 Lactuca sativa HOM05D004291 ORTHO05D005620 4.7e-08 62.4 48 68.8
Lsat_1_v5_gn_5_152921 Lactuca sativa HOM05D010604 ORTHO05D012476 4.7e-08 62.4 48 68.8
RhsimMtG0000800 Rhododendron simsii HOM05D010604 ORTHO05D012476 4.7e-08 62.4 48 68.8
Nitab4.5_0004533g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 6.1e-08 62.0 40 77.5
Sopen11g020200 Solanum pennellii HOM05D000004 ORTHO05D000002 6.1e-08 62.0 30 93.3
BraA07t28395Z Brassica rapa HOM05D000963 ORTHO05D005131 8.0e-08 61.6 41 75.6
Cfa010543 Carpinus fangiana HOM05D000963 ORTHO05D005131 1.4e-07 60.8 36 83.3
Oeu029253.1 Olea europaea HOM05D000963 ORTHO05D005131 2.3e-07 60.1 124 36.3
SEGI_14910 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 8.9e-07 58.2 78 47.4
Eucgr.I02498 Eucalyptus grandis HOM05D003497 ORTHO05D003964 1.2e-06 57.8 72 44.4
Sopen09g020260 Solanum pennellii HOM05D010604 ORTHO05D012476 1.2e-06 57.8 49 61.2


User provided reference genes

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