Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 5.6e-84 314.3 167 100.0
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 1.3e-77 293.1 167 91.0
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 3.0e-77 292.0 166 91.0
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 8.6e-77 290.4 167 89.8
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 1.9e-76 289.3 166 89.8
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 4.0e-74 281.6 166 87.3
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 2.9e-72 275.4 162 88.9
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 1.6e-70 269.6 167 82.6
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 1.6e-70 269.6 166 82.5
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 4.6e-70 268.1 151 90.7
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 1.7e-69 266.2 167 80.8
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 2.3e-69 265.8 159 84.9
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 2.3e-69 265.8 154 85.7
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 3.0e-69 265.4 164 82.9
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 3.0e-69 265.4 159 84.9
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 3.0e-69 265.4 159 84.9
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 3.0e-69 265.4 159 84.9
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 3.9e-69 265.0 154 86.4
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 3.9e-69 265.0 154 86.4
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 5.1e-69 264.6 167 80.2
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 5.1e-69 264.6 166 82.5
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 6.6e-69 264.2 166 81.9
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 6.6e-69 264.2 163 81.6
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 1.1e-68 263.5 158 84.2
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 1.1e-68 263.5 160 83.8
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.9e-68 262.7 154 86.4
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 2.5e-68 262.3 154 83.8
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 3.3e-68 261.9 163 79.1
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 4.3e-68 261.5 154 85.7
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 5.6e-68 261.2 166 80.1
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 5.6e-68 261.2 166 78.9
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 7.3e-68 260.8 160 83.1
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 1.3e-67 260.0 164 79.9
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 1.3e-67 260.0 166 76.5
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.1e-67 259.2 166 77.7
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 2.1e-67 259.2 163 81.6
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 2.8e-67 258.8 167 79.0
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 2.8e-67 258.8 168 76.2
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 6.2e-67 257.7 164 76.8
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 6.2e-67 257.7 164 78.0
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 6.2e-67 257.7 164 78.0
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 8.1e-67 257.3 158 81.0
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 8.1e-67 257.3 165 76.4
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 8.1e-67 257.3 161 82.6
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 8.1e-67 257.3 161 82.6
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.1e-66 256.9 167 77.8
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 1.4e-66 256.5 164 79.9
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.4e-66 256.5 168 76.2
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 1.4e-66 256.5 153 83.7
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 1.4e-66 256.5 154 83.8
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.8e-66 256.1 166 77.1
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 1.8e-66 256.1 157 82.8
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 2.4e-66 255.8 166 75.3
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 2.4e-66 255.8 166 75.3
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.4e-66 255.8 161 82.0
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 4.0e-66 255.0 167 79.0
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 4.0e-66 255.0 164 76.2
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 4.0e-66 255.0 164 77.4
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 4.0e-66 255.0 162 79.6
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 5.3e-66 254.6 166 77.1
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 5.3e-66 254.6 167 79.0
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 5.3e-66 254.6 167 79.0
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 6.9e-66 254.2 164 75.0
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 6.9e-66 254.2 166 77.7
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 6.9e-66 254.2 158 81.0
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 9.0e-66 253.8 166 75.3
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 9.0e-66 253.8 166 75.3
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.2e-65 253.4 167 74.3
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 1.2e-65 253.4 166 74.7
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 1.2e-65 253.4 154 83.1
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 1.2e-65 253.4 165 78.2
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 1.2e-65 253.4 173 76.9
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.5e-65 253.1 167 79.0
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.5e-65 253.1 167 79.0
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 1.5e-65 253.1 166 74.7
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 2.6e-65 252.3 166 74.7
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 3.4e-65 251.9 168 78.0
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 4.5e-65 251.5 161 77.6
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 5.8e-65 251.1 154 81.8
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 7.6e-65 250.8 167 77.8
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 9.9e-65 250.4 157 80.9
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 9.9e-65 250.4 156 79.5
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 9.9e-65 250.4 157 80.9
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 9.9e-65 250.4 157 80.9
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 9.9e-65 250.4 157 80.9
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.7e-64 249.6 153 79.7
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 1.7e-64 249.6 154 83.1
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 2.9e-64 248.8 156 80.1
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 4.9e-64 248.1 153 80.4
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 8.4e-64 247.3 147 83.7
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 1.4e-63 246.5 151 79.5
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 3.2e-63 245.4 154 78.6
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 1.6e-62 243.0 141 86.5
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 2.7e-62 242.3 153 80.4
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 3.5e-62 241.9 158 77.2
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 3.0e-61 238.8 153 79.1
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 6.7e-61 237.7 142 83.1
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 9.6e-60 233.8 153 78.4
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 2.1e-59 232.6 163 74.2
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 2.8e-59 232.3 153 76.5
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 3.7e-59 231.9 152 75.0
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 2.4e-58 229.2 164 72.0
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 9.0e-58 227.3 143 81.8
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 2.0e-57 226.1 165 70.3
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 3.4e-57 225.3 164 67.7
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.4e-55 219.9 137 78.1
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 1.9e-55 219.5 153 74.5
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 1.3e-53 213.4 140 77.1
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 1.5e-52 209.9 152 69.7
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 9.6e-52 207.2 131 78.6
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 1.8e-50 203.0 118 86.4
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 1.8e-50 203.0 153 65.4
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 3.1e-50 202.2 129 82.2
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 2.0e-49 199.5 162 63.6
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 1.9e-47 193.0 120 80.8
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 5.5e-47 191.4 154 65.6
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 6.0e-46 188.0 121 80.2
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.8e-45 186.4 107 86.0
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 1.1e-44 183.7 107 85.0
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 3.3e-44 182.2 152 60.5
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 9.7e-44 180.6 131 68.7
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 1.3e-43 180.3 108 84.3
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 1.3e-40 170.2 129 69.0
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 2.4e-34 149.4 91 81.3
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 2.6e-28 129.4 123 48.8
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 7.0e-18 94.7 106 54.7
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 9.1e-10 67.8 118 44.1


User provided reference genes

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