Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4051 Utricularia gibba HOM05D003811 ORTHO05D004470 1.5e-164 582.8 301 100.0
unitig_22.g5159 Utricularia gibba HOM05D003811 ORTHO05D004470 3.4e-100 369.0 297 67.7
CAN.G192.5 Capsicum annuum HOM05D003811 ORTHO05D004470 1.4e-64 250.8 301 51.2
Peaxi162Scf01038g00011 Petunia axillaris HOM05D003811 ORTHO05D004470 3.0e-64 249.6 302 51.0
Nitab4.5_0000949g0020 Nicotiana tabacum HOM05D003811 ORTHO05D004470 2.6e-63 246.5 296 51.7
Nitab4.5_0000491g0080 Nicotiana tabacum HOM05D003811 ORTHO05D004470 3.4e-63 246.1 289 50.9
Migut.J00797 Erythranthe guttata HOM05D003811 ORTHO05D004470 9.8e-63 244.6 275 56.0
Oeu006847.1 Olea europaea HOM05D003811 ORTHO05D004470 2.2e-62 243.4 278 52.9
Oeu018819.1 Olea europaea HOM05D003811 ORTHO05D004470 1.7e-59 233.8 266 50.8
Cc06_g20840 Coffea canephora HOM05D003811 ORTHO05D004470 1.5e-58 230.7 298 50.0
Nitab4.5_0000949g0010 Nicotiana tabacum HOM05D003811 ORTHO05D004470 5.6e-58 228.8 275 50.9
PGSC0003DMG400022983 Solanum tuberosum HOM05D003811 ORTHO05D004470 1.4e-56 224.2 304 49.0
DCAR_018030 Daucus carota HOM05D003811 ORTHO05D004470 1.2e-55 221.1 282 48.9
Oeu034800.1 Olea europaea HOM05D003811 ORTHO05D004470 1.2e-55 221.1 258 52.3
Sopen07g004460 Solanum pennellii HOM05D003811 ORTHO05D004470 1.7e-54 217.2 304 48.4
MSTRG.26548 Avicennia marina HOM05D003811 ORTHO05D004470 6.4e-54 215.3 289 46.7
DCAR_014667 Daucus carota HOM05D003811 ORTHO05D004470 1.9e-53 213.8 290 47.2
Migut.L01879 Erythranthe guttata HOM05D003811 ORTHO05D004470 1.9e-53 213.8 265 50.2
Solyc07g008540.3 Solanum lycopersicum HOM05D003811 ORTHO05D004470 1.2e-52 211.1 305 47.9
Cfa013454 Carpinus fangiana HOM05D003811 ORTHO05D004470 1.9e-50 203.8 269 49.8
MSTRG.10438 Avicennia marina HOM05D003811 ORTHO05D004470 9.5e-50 201.4 283 46.3
FvH4_4g07270 Fragaria vesca HOM05D003811 ORTHO05D004470 9.5e-50 201.4 272 47.1
FAN22G1182 Fragaria x ananassa HOM05D003811 ORTHO05D004470 9.5e-50 201.4 272 47.1
Oeu019552.1 Olea europaea HOM05D003811 ORTHO05D004470 1.6e-49 200.7 294 43.2
FAN17G0360 Fragaria x ananassa HOM05D003811 ORTHO05D004470 3.6e-49 199.5 272 47.4
FAN12G0553 Fragaria x ananassa HOM05D003811 ORTHO05D004470 1.8e-48 197.2 272 46.7
CSS0000053 Camellia sinensis var. sinensis HOM05D003811 ORTHO05D004470 3.1e-48 196.4 280 48.6
FAN07G1538 Fragaria x ananassa HOM05D003811 ORTHO05D004470 2.0e-47 193.7 278 46.8
RcHm_v2.0_Chr4g0399481 Rosa chinensis HOM05D003811 ORTHO05D004470 2.6e-47 193.4 268 46.6
MD13G1239300 Malus domestica HOM05D003811 ORTHO05D004470 3.4e-47 193.0 284 46.8
TAR620G0001 Trochodendron aralioides HOM05D003811 ORTHO05D004470 4.4e-47 192.6 269 48.0
SalBow5G4432 Salvia bowleyana HOM05D003811 ORTHO05D004470 1.1e-45 188.0 246 49.2
CiPaw.07G197300 Carya illinoinensis HOM05D003811 ORTHO05D004470 4.1e-45 186.0 289 43.3
SalBow5G0957 Salvia bowleyana HOM05D003811 ORTHO05D004470 5.4e-45 185.7 246 48.8
MBI13_g34046_MAGBIO Magnolia biondii HOM05D003811 ORTHO05D004470 1.6e-44 184.1 258 48.8
Duzib168G0111 Durio zibethinus HOM05D003811 ORTHO05D004470 2.1e-44 183.7 285 45.6
Hma1.2p1_1326F.1_g275850 Hydrangea macrophylla HOM05D003811 ORTHO05D004470 6.0e-44 182.2 257 44.7
Sabra18G0116100 Salix brachista HOM05D003811 ORTHO05D004470 6.0e-44 182.2 273 44.7
MD16G1248400 Malus domestica HOM05D003811 ORTHO05D004470 1.3e-43 181.0 283 42.4
ClCG11G011760 Citrullus lanatus HOM05D003811 ORTHO05D004470 2.3e-43 180.3 270 45.9
MELO3C003975.2 Cucumis melo HOM05D003811 ORTHO05D004470 5.1e-43 179.1 273 46.9
CsaV3_2G008720 Cucumis sativus L. HOM05D003811 ORTHO05D004470 8.6e-43 178.3 273 46.9
Dinv25445 Davidia involucrata HOM05D003811 ORTHO05D004470 8.6e-43 178.3 260 44.2
Hund13780 Selenicereus undatus HOM05D003811 ORTHO05D004470 7.3e-42 175.3 268 46.6
Lsat_1_v5_gn_7_56240 Lactuca sativa HOM05D003811 ORTHO05D004470 9.5e-42 174.9 268 42.9
Ah.10g036890 Amaranthus hybridus HOM05D003811 ORTHO05D004470 1.6e-41 174.1 266 45.1
Atru.chr7.754 Acer truncatum HOM05D003811 ORTHO05D004470 3.6e-41 172.9 249 45.4
Atru.chr7.775 Acer truncatum HOM05D003811 ORTHO05D004470 3.6e-41 172.9 249 45.4
EL10Ac2g04726 Beta vulgaris HOM05D003811 ORTHO05D004470 4.7e-41 172.6 290 43.4
Lj5C615T3 Lonicera japonica HOM05D003811 ORTHO05D004470 4.7e-41 172.6 324 40.7
vmacro05996 Vaccinium macrocarpon HOM05D003811 ORTHO05D004470 4.7e-41 172.6 293 44.0
FAN02G0923 Fragaria x ananassa HOM05D003811 ORTHO05D004470 6.2e-41 172.2 271 41.3
Rhsim03G0266200 Rhododendron simsii HOM05D003811 ORTHO05D004470 4.0e-40 169.5 306 40.8
Lj5C612T1 Lonicera japonica HOM05D003811 ORTHO05D004470 1.2e-39 167.9 306 41.2
Nn8g40778 Nelumbo nucifera HOM05D003811 ORTHO05D004470 1.2e-39 167.9 273 46.2
Hund16072 Selenicereus undatus HOM05D003811 ORTHO05D004470 1.5e-39 167.5 291 46.0
TWI63G0214 Tripterygium wilfordii HOM05D003811 ORTHO05D004470 1.5e-39 167.5 254 45.7
Sc10g0001710 Simmondsia chinensis HOM05D003811 ORTHO05D004470 2.0e-39 167.2 271 45.0
Ah.16g102470 Amaranthus hybridus HOM05D003811 ORTHO05D008019 2.6e-39 166.8 272 43.8
vmacro20813 Vaccinium macrocarpon HOM05D003832 ORTHO05D004365 3.4e-39 166.4 267 42.3
Aqoxy7G02811 Aquilegia oxysepala HOM05D003811 ORTHO05D004470 5.8e-39 165.6 276 44.2
Ciclev10008308m.g Citrus clementina HOM05D003811 ORTHO05D004470 5.8e-39 165.6 332 40.4
Dinv41179 Davidia involucrata HOM05D003811 ORTHO05D004470 2.2e-38 163.7 191 57.1
Lalb_Chr13g0299991 Lupinus albus HOM05D003811 ORTHO05D004470 3.8e-38 162.9 264 45.5
Potri.006G075200 Populus trichocarpa HOM05D003811 ORTHO05D004470 3.8e-38 162.9 270 41.5
Eucgr.C00112 Eucalyptus grandis HOM05D003811 ORTHO05D004470 8.4e-38 161.8 271 43.9
Manes.06G019300 Manihot esculenta HOM05D003811 ORTHO05D004470 1.1e-37 161.4 299 40.8
FvH4_6g24780 Fragaria vesca HOM05D003811 ORTHO05D004470 1.4e-37 161.0 272 40.1
Ca_27932_v3 Cicer arietinum L. HOM05D003811 ORTHO05D004470 3.2e-37 159.8 331 42.0
Potri.018G142100 Populus trichocarpa HOM05D003811 ORTHO05D004470 4.2e-37 159.5 273 42.1
Sed0025374 Sechium edule HOM05D003811 ORTHO05D004470 4.2e-37 159.5 255 44.7
Manes.14G159300 Manihot esculenta HOM05D003811 ORTHO05D004470 5.4e-37 159.1 256 41.8
Sed0004951 Sechium edule HOM05D003811 ORTHO05D004470 7.1e-37 158.7 266 45.1
Sabra06G0055900 Salix brachista HOM05D003811 ORTHO05D004470 1.2e-36 157.9 275 40.4
Duzib150G1212 Durio zibethinus HOM05D003811 ORTHO05D004470 1.6e-36 157.5 277 42.2
arahy.Tifrunner.gnm1.ann1.0QJD35 Arachis hypogaea HOM05D003811 ORTHO05D004470 3.5e-36 156.4 278 43.5
arahy.Tifrunner.gnm1.ann1.YRC4PH Arachis hypogaea HOM05D003811 ORTHO05D004470 3.5e-36 156.4 278 43.5
Rhsim01G0116800 Rhododendron simsii HOM05D003811 ORTHO05D004470 4.6e-36 156.0 268 42.2
Glyma.17G059100 Glycine max HOM05D003811 ORTHO05D004470 1.7e-35 154.1 269 43.5
Cpa.g.sc95.8 Carica papaya HOM05D003811 ORTHO05D004470 3.9e-35 152.9 279 43.0
Thecc.09G186300 Theobroma cacao HOM05D003811 ORTHO05D004470 5.1e-35 152.5 278 41.0
Medtr4g127420 Medicago truncatula HOM05D003811 ORTHO05D004470 8.7e-35 151.8 258 42.6
Psat4g013600 Pisum sativum HOM05D003811 ORTHO05D004470 8.7e-35 151.8 278 42.8
HanXRQChr09g0245431 Helianthus annuus HOM05D003811 ORTHO05D004470 1.1e-34 151.4 323 36.2
TWI34G1601 Tripterygium wilfordii HOM05D003811 ORTHO05D004470 1.5e-34 151.0 247 43.3
TPR.G32975 Trifolium pratense HOM05D003811 ORTHO05D004470 1.9e-34 150.6 284 41.5
GSVIVG01010855001 Vitis vinifera HOM05D003811 ORTHO05D004470 1.9e-34 150.6 275 41.5
AUR62012114 Chenopodium quinoa HOM05D003811 ORTHO05D004470 7.3e-34 148.7 255 44.7
Glyma.13G100700 Glycine max HOM05D003811 ORTHO05D004470 7.3e-34 148.7 269 40.1
Lj4g0014027 Lotus japonicus HOM05D003811 ORTHO05D004470 9.6e-34 148.3 266 44.4
AUR62040721 Chenopodium quinoa HOM05D003811 ORTHO05D004470 1.6e-33 147.5 252 44.0
Lsat_1_v5_gn_8_69001 Lactuca sativa HOM05D003811 ORTHO05D004470 8.1e-33 145.2 242 43.8
MBI16_g05834_MAGBIO Magnolia biondii HOM05D003811 ORTHO05D004470 8.1e-33 145.2 270 43.0
Lalb_Chr07g0180651 Lupinus albus HOM05D003811 ORTHO05D004470 1.8e-32 144.1 251 46.2
SGA_v2.0_scaffold112G31580 Striga asiatica HOM05D003811 ORTHO05D004470 2.4e-32 143.7 252 44.0
HanXRQChr03g0065501 Helianthus annuus HOM05D003811 ORTHO05D004470 9.0e-32 141.7 342 33.9
VMungo1215G0314 Vigna mungo HOM05D003811 ORTHO05D004470 2.6e-31 140.2 265 42.6
Prupe.1G074900 Prunus persica HOM05D003811 ORTHO05D004470 9.9e-31 138.3 282 37.6
SGA_v2.0_scaffold31G12764 Striga asiatica HOM05D003811 ORTHO05D004470 1.7e-30 137.5 195 52.3
Lalb_Chr12g0199621 Lupinus albus HOM05D003811 ORTHO05D004470 8.4e-30 135.2 280 41.4
Thhalv10013517m.g Eutrema salsugineum HOM05D003811 ORTHO05D004470 2.4e-29 133.7 307 37.8
HanXRQChr05g0141071 Helianthus annuus HOM05D003811 ORTHO05D004470 3.2e-29 133.3 228 38.2
Eucgr.C02219 Eucalyptus grandis HOM05D003811 ORTHO05D004470 1.2e-28 131.3 272 39.0
ECA240G2391 Erigeron canadensis HOM05D003811 ORTHO05D004470 4.6e-28 129.4 282 36.9
AL7G27010 Arabidopsis lyrata HOM05D003811 ORTHO05D004470 1.0e-27 128.3 253 40.3
Lsat_1_v5_gn_5_83141 Lactuca sativa HOM05D003811 ORTHO05D004470 1.0e-27 128.3 268 37.7
PSO170G1122 Papaver somniferum HOM05D003811 ORTHO05D004470 1.0e-27 128.3 265 40.8
PSO063G0992 Papaver somniferum HOM05D003811 ORTHO05D004470 3.9e-27 126.3 265 40.8
Gohir.A05G002200 Gossypium hirsutum HOM05D003811 ORTHO05D004470 5.1e-27 125.9 265 41.5
Gohir.D05G002600 Gossypium hirsutum HOM05D003811 ORTHO05D004470 5.1e-27 125.9 261 40.6
HanXRQChr10g0308851 Helianthus annuus HOM05D003811 ORTHO05D004470 6.6e-27 125.6 270 38.5
Sp6g18910 Schrenkiella parvula HOM05D003811 ORTHO05D004470 2.5e-26 123.6 292 39.4
Gorai.009G002400 Gossypium raimondii HOM05D003811 ORTHO05D004470 4.3e-26 122.9 270 40.4
QL02p046940 Quercus lobata HOM05D003811 ORTHO05D004470 9.6e-26 121.7 272 38.6
Sp7g24010 Schrenkiella parvula HOM05D003811 ORTHO05D004470 9.6e-26 121.7 270 40.7
SGA_v2.0_scaffold511G52626 Striga asiatica HOM05D003811 ORTHO05D004470 1.6e-25 120.9 246 37.4
Phvul.003G141200 Phaseolus vulgaris HOM05D003811 ORTHO05D004470 2.8e-25 120.2 264 39.0
BcaB05g22326 Brassica carinata HOM05D003811 ORTHO05D004470 1.1e-24 118.2 274 39.4
AT4G25990 Arabidopsis thaliana HOM05D003811 ORTHO05D004470 2.4e-24 117.1 251 38.2
BcaB08g36076 Brassica carinata HOM05D003811 ORTHO05D004470 1.2e-23 114.8 267 35.6
BcaC04g19992 Brassica carinata HOM05D003811 ORTHO05D004470 2.6e-23 113.6 225 36.9
C09p49010 Brassica napus HOM05D003811 ORTHO05D004470 2.6e-23 113.6 225 36.9
Carub.0007s1496 Capsella rubella HOM05D003811 ORTHO05D004470 7.6e-23 112.1 249 36.9
BolC9t57752H Brassica oleracea HOM05D003811 ORTHO05D004470 2.2e-22 110.5 260 33.8
BcaC03g14176 Brassica carinata HOM05D003811 ORTHO05D004470 3.8e-22 109.8 255 40.0
C02p14510 Brassica napus HOM05D003811 ORTHO05D004470 3.8e-22 109.8 255 40.0
BolC2t07575H Brassica oleracea HOM05D003811 ORTHO05D004470 3.8e-22 109.8 255 40.0
A10p14570 Brassica napus HOM05D003811 ORTHO05D004470 4.9e-22 109.4 225 36.0
BraA01t01681Z Brassica rapa HOM05D003811 ORTHO05D004470 4.9e-22 109.4 257 41.6
Aa31LG3G13080 Aethionema arabicum HOM05D003811 ORTHO05D004470 6.4e-22 109.0 226 40.7
BolC7t45947H Brassica oleracea HOM05D003811 ORTHO05D004470 6.4e-22 109.0 251 39.8
CARHR233500 Cardamine hirsuta HOM05D003811 ORTHO05D004470 6.4e-22 109.0 228 38.6
BraA10t43544Z Brassica rapa HOM05D003811 ORTHO05D004470 8.4e-22 108.6 225 36.0
C01p21610 Brassica napus HOM05D003811 ORTHO05D004470 1.9e-21 107.5 188 46.3
BolC1t02080H Brassica oleracea HOM05D003811 ORTHO05D004470 1.9e-21 107.5 188 46.3
C07p54590 Brassica napus HOM05D003811 ORTHO05D004470 3.2e-21 106.7 251 39.8
BcaC09g50723 Brassica carinata HOM05D003811 ORTHO05D004470 5.4e-21 105.9 188 44.7
A01p17250 Brassica napus HOM05D003811 ORTHO05D004470 5.4e-21 105.9 191 49.2
BcaC06g32778 Brassica carinata HOM05D003811 ORTHO05D004470 7.1e-21 105.5 263 38.4
Thhalv10025322m.g Eutrema salsugineum HOM05D003811 ORTHO05D004470 9.3e-21 105.1 266 37.2
BraA03t14705Z Brassica rapa HOM05D003811 ORTHO05D004470 1.2e-20 104.8 245 38.4
BraA02t05937Z Brassica rapa HOM05D003811 ORTHO05D004470 1.6e-20 104.4 264 40.5
CDE06G2566 Ceratophyllum demersum HOM05D003811 ORTHO05D004470 1.6e-20 104.4 261 35.6
PGR001G0001 Punica granatum HOM05D003811 ORTHO05D004470 3.5e-20 103.2 267 38.6
HPP92_010287 Vanilla planifolia HOM05D003811 ORTHO05D004470 3.5e-20 103.2 265 34.7
A02p08670 Brassica napus HOM05D003811 ORTHO05D004470 1.3e-19 101.3 258 39.1
AT5G57180 Arabidopsis thaliana HOM05D003811 ORTHO05D004470 1.8e-19 100.9 188 44.7
Actinidia38496 Actinidia chinensis HOM05D003811 ORTHO05D004470 3.0e-19 100.1 127 41.7
Oeu064847.1 Olea europaea HOM05D003811 ORTHO05D004470 6.7e-19 99.0 89 66.3
CARHR270970 Cardamine hirsuta HOM05D003811 ORTHO05D004470 1.1e-18 98.2 290 33.4
AL8G33110 Arabidopsis lyrata HOM05D003811 ORTHO05D004470 2.5e-18 97.1 192 44.8
CiPaw.08G032400 Carya illinoinensis HOM05D003811 ORTHO05D004470 9.6e-18 95.1 297 31.0
BcaNung03775 Brassica carinata HOM05D003811 ORTHO05D004470 1.6e-17 94.4 255 40.0
Carub.0008s1769 Capsella rubella HOM05D003811 ORTHO05D004470 1.1e-16 91.7 298 33.6
COL.COLO4_07099 Corchorus olitorius HOM05D003811 ORTHO05D004470 1.4e-16 91.3 276 31.9
HPP92_017127 Vanilla planifolia HOM05D003811 ORTHO05D004470 4.0e-16 89.7 277 34.3
A03p56350 Brassica napus HOM05D003811 ORTHO05D004470 1.5e-15 87.8 186 41.9
ECA234G4485 Erigeron canadensis HOM05D003811 ORTHO05D004470 5.8e-15 85.9 99 45.5
Ca_02108_v3 Cicer arietinum L. HOM05D003811 ORTHO05D004470 7.6e-15 85.5 262 34.4
Glyma.15G166500 Glycine max HOM05D003811 ORTHO05D004470 7.6e-15 85.5 229 31.9
Psat1g144040 Pisum sativum HOM05D003811 ORTHO05D004470 2.9e-14 83.6 310 31.6
ECA236G3708 Erigeron canadensis HOM05D003811 ORTHO05D004470 3.8e-14 83.2 184 33.7
Glyma.09G059800 Glycine max HOM05D003811 ORTHO05D004470 3.8e-14 83.2 262 32.1
FAN05G5342 Fragaria x ananassa HOM05D003811 ORTHO05D004470 8.4e-14 82.0 104 51.9
TPR.G7568 Trifolium pratense HOM05D002228 ORTHO05D002347 1.9e-13 80.9 259 31.3
FAN05G4809 Fragaria x ananassa HOM05D003811 ORTHO05D004470 2.5e-13 80.5 112 40.2
Phvul.009G236100 Phaseolus vulgaris HOM05D003811 ORTHO05D004470 5.5e-13 79.3 217 32.3
ATR0626G357 Amborella trichopoda HOM05D003811 ORTHO05D004470 9.3e-13 78.6 222 36.5
Os06g0699600 Oryza sativa ssp. japonica HOM05D003811 ORTHO05D004470 2.3e-11 73.9 236 28.4
Os02g0148000 Oryza sativa ssp. japonica HOM05D003811 ORTHO05D004470 5.1e-11 72.8 273 30.4
FAN24G1311 Fragaria x ananassa HOM05D003811 ORTHO05D004470 1.1e-10 71.6 108 38.0
FvH4_2g01490 Fragaria vesca HOM05D003811 ORTHO05D004470 2.5e-10 70.5 108 38.0
Medtr2g038010 Medicago truncatula HOM05D003811 ORTHO05D004470 4.3e-10 69.7 315 29.2
Actinidia29953 Actinidia chinensis HOM05D003811 ORTHO05D004470 7.4e-10 68.9 107 37.4
Zm00001eb272980 Zea mays HOM05D018649 ORTHO05D004470 1.1e-08 65.1 293 28.0
Zm00001eb226810 Zea mays HOM05D018649 ORTHO05D004470 1.5e-07 61.2 287 26.5
Zm00001eb208040 Zea mays HOM05D003811 ORTHO05D004470 3.4e-07 60.1 266 28.9


User provided reference genes

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