Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4035 Utricularia gibba HOM05D005335 ORTHO05D006472 1.9e-56 222.6 141 100.0
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 8.5e-09 64.3 140 52.9
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 1.5e-08 63.5 135 45.2
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 4.2e-08 62.0 131 51.9
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 5.5e-08 61.6 120 39.2
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 5.5e-08 61.6 123 39.0
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 5.5e-08 61.6 121 36.4
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 7.2e-08 61.2 121 36.4
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 2.1e-07 59.7 130 56.2
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 2.1e-07 59.7 118 39.0
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.1e-07 59.7 133 51.9
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.1e-07 59.7 121 35.5
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 2.1e-07 59.7 146 50.7
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 2.1e-07 59.7 128 48.4
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 2.7e-07 59.3 134 51.5
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 3.6e-07 58.9 118 39.0
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 4.7e-07 58.5 121 39.7
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 4.7e-07 58.5 149 50.3
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 6.1e-07 58.2 123 49.6
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 6.1e-07 58.2 127 52.8
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 6.1e-07 58.2 127 52.8
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 8.0e-07 57.8 127 38.6
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 8.0e-07 57.8 118 39.0
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 8.0e-07 57.8 124 37.9
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 8.0e-07 57.8 126 40.5
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 1.0e-06 57.4 124 37.1
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 1.0e-06 57.4 124 36.3
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 1.4e-06 57.0 130 36.2
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 1.4e-06 57.0 132 35.6
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 1.4e-06 57.0 131 43.5
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.8e-06 56.6 121 40.5
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 2.3e-06 56.2 129 36.4
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 2.3e-06 56.2 132 35.6
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 2.3e-06 56.2 129 36.4
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 2.3e-06 56.2 129 36.4
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 2.3e-06 56.2 132 35.6
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 2.3e-06 56.2 128 36.7
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 3.0e-06 55.8 121 34.7
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 3.0e-06 55.8 126 51.6
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 4.0e-06 55.5 101 37.6
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 4.0e-06 55.5 121 39.7
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 4.0e-06 55.5 124 37.1
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 4.0e-06 55.5 124 37.1
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 4.0e-06 55.5 126 54.8
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 5.2e-06 55.1 123 37.4
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 6.7e-06 54.7 131 36.6
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 6.7e-06 54.7 128 39.1
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 8.8e-06 54.3 129 34.9


User provided reference genes

Program Settings