Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 3.4e-250 867.8 439 100.0
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 6.4e-164 581.3 446 70.0
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 2.2e-156 556.2 470 65.3
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 5.1e-153 545.0 435 67.8
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 1.6e-138 496.9 474 59.9
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 1.1e-136 490.7 457 59.7
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 2.6e-136 489.6 457 60.0
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 9.1e-134 481.1 456 57.9
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 1.5e-133 480.3 458 58.3
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 5.9e-133 478.4 456 57.5
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 1.3e-132 477.2 399 63.4
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 1.3e-132 477.2 456 57.2
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 1.7e-132 476.9 466 59.0
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 8.5e-132 474.6 457 58.0
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 3.2e-131 472.6 455 58.0
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 7.2e-131 471.5 456 57.2
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 9.4e-131 471.1 455 59.3
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 1.6e-130 470.3 454 58.1
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 1.6e-130 470.3 458 58.7
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 3.6e-130 469.2 452 56.9
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 8.0e-130 468.0 455 57.1
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 1.1e-128 464.2 456 58.3
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 2.0e-128 463.4 452 58.2
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 2.0e-128 463.4 447 58.2
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 4.4e-128 462.2 446 59.0
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 9.7e-128 461.1 456 57.9
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 3.5e-125 452.6 456 56.6
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 1.3e-124 450.7 454 56.8
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 2.9e-124 449.5 467 56.1
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 8.5e-124 448.0 456 55.0
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 3.6e-122 442.6 455 57.4
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 8.0e-122 441.4 473 55.6
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 4.0e-121 439.1 457 55.4
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 4.0e-121 439.1 457 55.6
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 6.8e-121 438.3 437 57.4
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 6.8e-121 438.3 437 54.7
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 3.4e-120 436.0 431 56.1
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 2.8e-119 433.0 443 56.2
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 3.7e-119 432.6 399 59.4
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 4.8e-119 432.2 443 56.7
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 4.8e-119 432.2 454 54.6
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 6.3e-119 431.8 456 54.6
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 8.3e-119 431.4 524 51.7
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 3.1e-118 429.5 454 54.4
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 5.3e-118 428.7 449 56.1
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 1.6e-117 427.2 454 55.1
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 2.9e-116 422.9 449 55.5
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 1.9e-115 420.2 457 53.2
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 5.5e-115 418.7 463 53.6
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 7.2e-115 418.3 466 53.0
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 7.2e-115 418.3 448 54.5
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.2e-114 417.5 465 53.1
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 2.7e-114 416.4 418 56.0
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 3.0e-113 412.9 386 59.8
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 8.8e-113 411.4 454 53.5
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 3.4e-112 409.5 456 54.2
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 2.2e-111 406.8 456 53.5
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 2.8e-111 406.4 453 51.9
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 2.4e-110 403.3 463 53.6
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 3.1e-110 402.9 445 53.5
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 7.0e-110 401.7 439 52.6
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 9.1e-110 401.4 265 78.5
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 1.6e-109 400.6 458 53.1
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 2.7e-109 399.8 462 51.7
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 1.7e-108 397.1 340 60.9
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 5.0e-108 395.6 328 63.1
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 1.6e-106 390.6 445 52.1
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 2.8e-106 389.8 313 64.5
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 2.3e-105 386.7 381 56.4
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 6.3e-103 378.6 404 52.7
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 8.3e-103 378.3 345 59.4
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 1.1e-102 377.9 451 51.4
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 2.4e-102 376.7 330 63.0
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 2.4e-102 376.7 461 51.6
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 4.1e-102 375.9 458 49.8
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 7.0e-102 375.2 458 50.2
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 9.2e-102 374.8 472 49.8
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 2.7e-101 373.2 461 49.7
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 1.0e-100 371.3 462 51.9
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 1.0e-100 371.3 439 49.2
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 2.5e-99 366.7 460 49.3
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 2.5e-99 366.7 422 52.1
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 7.3e-99 365.2 472 48.7
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 9.5e-99 364.8 253 70.4
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 2.3e-97 360.1 476 47.9
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 3.7e-95 352.8 426 51.2
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 1.1e-94 351.3 399 52.1
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 6.6e-92 342.0 348 55.2
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 1.8e-89 334.0 373 52.0
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 6.8e-89 332.0 407 49.4
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 4.1e-86 322.8 487 45.2
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 7.1e-86 322.0 385 49.6
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 3.0e-84 316.6 419 47.0
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 1.8e-73 280.8 452 39.8
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 1.2e-72 278.1 316 50.0
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 2.0e-72 277.3 468 40.6
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 7.1e-70 268.9 181 74.0
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 2.1e-66 257.3 469 37.1
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.4e-65 254.6 477 37.9
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 8.7e-60 235.3 423 40.9
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 7.1e-54 215.7 207 50.7
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 9.3e-54 215.3 351 38.2
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 4.9e-47 193.0 207 53.1
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 3.5e-45 186.8 181 58.0
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 3.0e-44 183.7 389 37.3
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.7e-31 141.4 191 39.3
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 4.4e-19 100.1 155 40.6
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 7.4e-19 99.4 183 43.2
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 1.4e-09 68.6 43 67.4
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 1.8e-09 68.2 63 57.1
CAN.G166.15 Capsicum annuum HOM05D007103 ORTHO05D008948 4.5e-08 63.5 89 40.4


User provided reference genes

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