Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3955 Utricularia gibba HOM05D002646 ORTHO05D002782 1.7e-32 142.1 74 100.0
ECA236G2773 Erigeron canadensis HOM05D002646 ORTHO05D002782 1.3e-19 99.4 70 65.7
Hma1.2p1_1663F.1_g296320 Hydrangea macrophylla HOM05D002646 ORTHO05D002782 3.6e-19 97.8 70 64.3
Rhsim07G0027000 Rhododendron simsii HOM05D002646 ORTHO05D002782 1.2e-17 92.8 67 65.7
TWI59G0322 Tripterygium wilfordii HOM05D002646 ORTHO05D002782 1.4e-15 85.9 69 59.4
arahy.Tifrunner.gnm1.ann1.7IJL1I Arachis hypogaea HOM05D002646 ORTHO05D002782 6.7e-13 77.0 53 66.0
arahy.Tifrunner.gnm1.ann1.HKT7FP Arachis hypogaea HOM05D002646 ORTHO05D002782 6.7e-13 77.0 53 66.0
Lsat_1_v5_gn_7_7441 Lactuca sativa HOM05D002646 ORTHO05D002782 9.6e-12 73.2 52 67.3
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 1.3e-11 72.8 50 68.0
Rhsim08G0118000 Rhododendron simsii HOM05D002646 ORTHO05D002782 2.1e-11 72.0 47 74.5
RhsimUnG0099800 Rhododendron simsii HOM05D002646 ORTHO05D002782 2.1e-11 72.0 47 74.5
Aa31LG1G11300 Aethionema arabicum HOM05D002646 ORTHO05D002782 2.8e-11 71.6 53 66.0
Duzib268G0058 Durio zibethinus HOM05D002646 ORTHO05D002782 1.1e-10 69.7 49 69.4
HanXRQChr04g0122351 Helianthus annuus HOM05D002646 ORTHO05D002782 2.4e-10 68.6 49 65.3
Lj1g0023852 Lotus japonicus HOM05D002646 ORTHO05D002782 2.4e-10 68.6 50 66.0
vmacro13392 Vaccinium macrocarpon HOM05D002646 ORTHO05D002782 2.4e-10 68.6 50 68.0
PSO478G1528 Papaver somniferum HOM05D002646 ORTHO05D002782 3.1e-10 68.2 50 68.0
Oeu003485.1 Olea europaea HOM05D002646 ORTHO05D002782 4.0e-10 67.8 50 66.0
PSO017G2345 Papaver somniferum HOM05D002646 ORTHO05D002782 4.0e-10 67.8 71 47.9
Ca_07824_v3 Cicer arietinum L. HOM05D002646 ORTHO05D002782 5.3e-10 67.4 50 68.0
Medtr7g075000 Medicago truncatula HOM05D002646 ORTHO05D002782 5.3e-10 67.4 50 68.0
Medtr7g075010 Medicago truncatula HOM05D002646 ORTHO05D002782 5.3e-10 67.4 50 68.0
Phvul.008G083500 Phaseolus vulgaris HOM05D002646 ORTHO05D002782 5.3e-10 67.4 49 63.3
AT1G01970 Arabidopsis thaliana HOM05D002646 ORTHO05D002782 6.9e-10 67.0 50 66.0
CARHR020090 Cardamine hirsuta HOM05D002646 ORTHO05D002782 6.9e-10 67.0 68 45.6
Duzib268G1615 Durio zibethinus HOM05D002646 ORTHO05D002782 6.9e-10 67.0 47 70.2
TPR.G26954 Trifolium pratense HOM05D002646 ORTHO05D002782 6.9e-10 67.0 50 64.0
CsaV3_3G009620 Cucumis sativus L. HOM05D002646 ORTHO05D002782 9.0e-10 66.6 50 62.0
Lalb_Chr03g0039441 Lupinus albus HOM05D002646 ORTHO05D002782 9.0e-10 66.6 50 66.0
PSO675G2317 Papaver somniferum HOM05D002646 ORTHO05D002782 9.0e-10 66.6 71 47.9
PSO782G0929 Papaver somniferum HOM05D002646 ORTHO05D002782 9.0e-10 66.6 50 66.0
MELO3C006182.2 Cucumis melo HOM05D002646 ORTHO05D002782 1.2e-09 66.2 50 60.0
Phvul.008G076800 Phaseolus vulgaris HOM05D002646 ORTHO05D002782 1.2e-09 66.2 50 64.0
AL1G10350 Arabidopsis lyrata HOM05D002646 ORTHO05D002782 1.5e-09 65.9 50 64.0
CSS0029682 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 1.5e-09 65.9 56 57.1
CSS0036552 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 1.5e-09 65.9 56 57.1
Thhalv10007755m.g Eutrema salsugineum HOM05D002646 ORTHO05D002782 1.5e-09 65.9 50 64.0
Atru.chr5.320 Acer truncatum HOM05D002646 ORTHO05D002782 2.0e-09 65.5 53 62.3
ClCG05G002180 Citrullus lanatus HOM05D002646 ORTHO05D002782 2.0e-09 65.5 50 62.0
FAN01G3025 Fragaria x ananassa HOM05D002646 ORTHO05D002782 2.0e-09 65.5 53 58.5
Nn4g26422 Nelumbo nucifera HOM05D002646 ORTHO05D002782 2.0e-09 65.5 49 63.3
MD08G1028000 Malus domestica HOM05D002646 ORTHO05D002782 3.4e-09 64.7 49 61.2
BcaNung05290 Brassica carinata HOM05D002646 ORTHO05D002782 4.5e-09 64.3 46 67.4
A10p00160 Brassica napus HOM05D002646 ORTHO05D002782 4.5e-09 64.3 46 67.4
C05p00160 Brassica napus HOM05D002646 ORTHO05D002782 4.5e-09 64.3 46 67.4
BolC5t28806H Brassica oleracea HOM05D002646 ORTHO05D002782 4.5e-09 64.3 46 67.4
BraA10t42295Z Brassica rapa HOM05D002646 ORTHO05D002782 4.5e-09 64.3 46 67.4
Thhalv10006936m.g Eutrema salsugineum HOM05D002646 ORTHO05D002782 4.5e-09 64.3 68 44.1
Psat3g115520 Pisum sativum HOM05D002646 ORTHO05D002782 4.5e-09 64.3 50 64.0
COL.COLO4_12558 Corchorus olitorius HOM05D002646 ORTHO05D002782 5.8e-09 63.9 46 65.2
Nn4g23787 Nelumbo nucifera HOM05D002646 ORTHO05D002782 5.8e-09 63.9 49 61.2
Peaxi162Scf00140g10018 Petunia axillaris HOM05D002646 ORTHO05D002782 5.8e-09 63.9 53 62.3
CARHR000380 Cardamine hirsuta HOM05D002646 ORTHO05D002782 7.6e-09 63.5 50 62.0
Sed0003475 Sechium edule HOM05D002646 ORTHO05D002782 7.6e-09 63.5 50 58.0
THA.LOC104817013 Tarenaya hassleriana HOM05D002646 ORTHO05D002782 1.0e-08 63.2 49 57.1
BcaB03g13627 Brassica carinata HOM05D002646 ORTHO05D002782 1.3e-08 62.8 46 65.2
BcaB07g31981 Brassica carinata HOM05D002646 ORTHO05D002782 1.3e-08 62.8 68 44.1
Carub.0001s0027 Capsella rubella HOM05D002646 ORTHO05D002782 1.3e-08 62.8 50 64.0
Duzib268G0077 Durio zibethinus HOM05D002646 ORTHO05D002782 1.3e-08 62.8 43 69.8
DCAR_006871 Daucus carota HOM05D002646 ORTHO05D002782 1.7e-08 62.4 50 56.0
Potri.014G070500 Populus trichocarpa HOM05D002646 ORTHO05D002782 1.7e-08 62.4 50 60.0
TPR.G20158 Trifolium pratense HOM05D002646 ORTHO05D002782 1.7e-08 62.4 73 42.5
BcaC05g25840 Brassica carinata HOM05D002646 ORTHO05D002782 2.2e-08 62.0 68 42.6
A06p15700 Brassica napus HOM05D002646 ORTHO05D002782 2.2e-08 62.0 68 42.6
C05p18020 Brassica napus HOM05D002646 ORTHO05D002782 2.2e-08 62.0 68 42.6
BolC5t30509H Brassica oleracea HOM05D002646 ORTHO05D002782 2.2e-08 62.0 68 42.6
BraA06t24679Z Brassica rapa HOM05D002646 ORTHO05D002782 2.2e-08 62.0 68 42.6
Sp1g17390 Schrenkiella parvula HOM05D002646 ORTHO05D002782 2.9e-08 61.6 68 42.6
Ciclev10020287m.g Citrus clementina HOM05D002646 ORTHO05D002782 3.8e-08 61.2 48 60.4
Lj5g0008895 Lotus japonicus HOM05D002646 ORTHO05D002782 3.8e-08 61.2 73 43.8
Thecc.01G375100 Theobroma cacao HOM05D002646 ORTHO05D002782 3.8e-08 61.2 41 70.7
AL1G32270 Arabidopsis lyrata HOM05D002646 ORTHO05D002782 4.9e-08 60.8 68 41.2
AT1G19520 Arabidopsis thaliana HOM05D002646 ORTHO05D002782 4.9e-08 60.8 68 41.2
Sp1g00330 Schrenkiella parvula HOM05D002646 ORTHO05D002782 4.9e-08 60.8 50 62.0
VMungo0647G1092 Vigna mungo HOM05D002646 ORTHO05D002782 4.9e-08 60.8 73 45.2
CSS0007142 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 6.5e-08 60.5 68 47.1
Glyma.17G251300 Glycine max HOM05D002646 ORTHO05D002782 6.5e-08 60.5 73 43.8
Lj9A571T76 Lonicera japonica HOM05D002646 ORTHO05D002782 6.5e-08 60.5 50 58.0
Haze_16825 Corylus avellana HOM05D002646 ORTHO05D002782 8.4e-08 60.1 43 65.1
CDE05G0187 Ceratophyllum demersum HOM05D002646 ORTHO05D002782 1.1e-07 59.7 65 44.6
Migut.E00070 Erythranthe guttata HOM05D002646 ORTHO05D002782 1.1e-07 59.7 44 63.6
Glyma.14G073700 Glycine max HOM05D002646 ORTHO05D002782 1.1e-07 59.7 73 43.8
PGR042G3460 Punica granatum HOM05D002646 ORTHO05D002782 1.1e-07 59.7 49 63.3
Sabra14G0050200 Salix brachista HOM05D002646 ORTHO05D002782 1.4e-07 59.3 50 58.0
Carub.0001s1909 Capsella rubella HOM05D002646 ORTHO05D002782 1.9e-07 58.9 68 42.6
CAN.G388.3 Capsicum annuum HOM05D002646 ORTHO05D002782 1.9e-07 58.9 38 76.3
Hund22797 Selenicereus undatus HOM05D002646 ORTHO05D002782 1.9e-07 58.9 50 56.0
Manes.01G265200 Manihot esculenta HOM05D002646 ORTHO05D002782 2.5e-07 58.5 49 57.1
Phvul.001G013700 Phaseolus vulgaris HOM05D002646 ORTHO05D002782 2.5e-07 58.5 73 43.8
Aqoxy7G00603 Aquilegia oxysepala HOM05D002646 ORTHO05D002782 3.2e-07 58.2 50 56.0
Os02g0611400 Oryza sativa ssp. japonica HOM05D002646 ORTHO05D002782 3.2e-07 58.2 71 39.4
Actinidia31415 Actinidia chinensis HOM05D002646 ORTHO05D002782 4.2e-07 57.8 44 59.1
Aqoxy2G03652 Aquilegia oxysepala HOM05D002646 ORTHO05D002782 4.2e-07 57.8 71 39.4
Gohir.D08G155000 Gossypium hirsutum HOM05D002646 ORTHO05D002782 7.1e-07 57.0 41 63.4
Gorai.004G161000 Gossypium raimondii HOM05D002646 ORTHO05D002782 7.1e-07 57.0 41 63.4
MD11G1162400 Malus domestica HOM05D002646 ORTHO05D002782 7.1e-07 57.0 68 45.6
Lalb_Chr14g0369361 Lupinus albus HOM05D002646 ORTHO05D002782 9.3e-07 56.6 73 42.5
Actinidia12264 Actinidia chinensis HOM05D002646 ORTHO05D002782 1.2e-06 56.2 38 68.4
EL10Ac2g03761 Beta vulgaris HOM05D002646 ORTHO05D002782 1.2e-06 56.2 47 57.4
CDE09G1284 Ceratophyllum demersum HOM05D002646 ORTHO05D002782 1.6e-06 55.8 51 49.0
Os07g0661900 Oryza sativa ssp. japonica HOM05D002646 ORTHO05D002782 1.6e-06 55.8 45 60.0
Zm00001eb329950 Zea mays HOM05D002646 ORTHO05D002782 1.6e-06 55.8 50 58.0
Prupe.2G146700 Prunus persica HOM05D002646 ORTHO05D002782 2.7e-06 55.1 42 59.5
Sabra05G0176100 Salix brachista HOM05D002646 ORTHO05D002782 2.7e-06 55.1 60 50.0
TWI23G1057 Tripterygium wilfordii HOM05D002646 ORTHO05D002782 2.7e-06 55.1 52 50.0
FvH4_7g12010 Fragaria vesca HOM05D002646 ORTHO05D002782 4.6e-06 54.3 46 54.3
FAN03G1830 Fragaria x ananassa HOM05D002646 ORTHO05D002782 4.6e-06 54.3 46 54.3
FAN06G4772 Fragaria x ananassa HOM05D002646 ORTHO05D002782 4.6e-06 54.3 46 54.3
FAN10G4284 Fragaria x ananassa HOM05D002646 ORTHO05D002782 4.6e-06 54.3 46 54.3
Eucgr.G00320 Eucalyptus grandis HOM05D002646 ORTHO05D002782 7.9e-06 53.5 35 71.4
HanXRQChr03g0069631 Helianthus annuus HOM05D002646 ORTHO05D002782 7.9e-06 53.5 66 40.9


User provided reference genes

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